RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 IGKV2-28A0A075B6P5 120 aa7.63□□□□□ -1.19
SGCE-203ENST00000425444 IGKV2D-28P01615 120 aa7.63□□□□□ -1.19
SGCE-203ENST00000425444 KRTAP1-4P0C5Y4 121 aa7.63□□□□□ -1.19
SGCE-203ENST00000425444 RPL24P83731 157 aaKnown RBP7.63□□□□□ -1.19
SGCE-203ENST00000425444 TMEM223A0PJW6 202 aa7.62□□□□□ -1.19
SGCE-203ENST00000425444 SCO1O75880 301 aa7.62□□□□□ -1.19
SGCE-203ENST00000425444 SERF1AO75920 110 aa7.61□□□□□ -1.19
SGCE-203ENST00000425444 LEPROTL1O95214 131 aa7.61□□□□□ -1.19
SGCE-203ENST00000425444 RPL13AP40429 203 aaKnown RBP7.61□□□□□ -1.19
SGCE-203ENST00000425444 UBE2AP49459 152 aa7.61□□□□□ -1.19
SGCE-203ENST00000425444 LINC00158P58513 81 aa7.61□□□□□ -1.19
SGCE-203ENST00000425444 CRCT1Q9UGL9 99 aa7.61□□□□□ -1.19
SGCE-203ENST00000425444 A0A0U1RRA0 63 aa7.6□□□□□ -1.19
SGCE-203ENST00000425444 VPREB1P12018 145 aa7.6□□□□□ -1.19
SGCE-203ENST00000425444 MEIG1Q5JSS6 88 aa7.6□□□□□ -1.19
SGCE-203ENST00000425444 ATP6V1G1O75348 118 aa7.59□□□□□ -1.19
SGCE-203ENST00000425444 LINC00310P59036 64 aa7.58□□□□□ -1.2
SGCE-203ENST00000425444 HSPB8Q9UJY1 196 aa7.58□□□□□ -1.2
SGCE-203ENST00000425444 SMIM13P0DJ93 91 aa7.57□□□□□ -1.2
SGCE-203ENST00000425444 FABP4P15090 132 aa7.57□□□□□ -1.2
SGCE-203ENST00000425444 HERV-K104P63124 156 aa7.57□□□□□ -1.2
SGCE-203ENST00000425444 PRR4Q16378 134 aa7.57□□□□□ -1.2
SGCE-203ENST00000425444 COLCA2A8K830 154 aa7.56□□□□□ -1.2
SGCE-203ENST00000425444 TMEM238C9JI98 176 aa7.56□□□□□ -1.2
SGCE-203ENST00000425444 PLNP26678 52 aa7.56□□□□□ -1.2
SGCE-203ENST00000425444 FAM19A1Q7Z5A9 133 aa7.56□□□□□ -1.2
SGCE-203ENST00000425444 TMEM126AQ9H061 195 aa7.56□□□□□ -1.2
SGCE-203ENST00000425444 NDUFA12Q9UI09 145 aa7.56□□□□□ -1.2
SGCE-203ENST00000425444 MYMXA0A1B0GTQ4 84 aa7.55□□□□□ -1.2
SGCE-203ENST00000425444 PRLHP81277 87 aa7.55□□□□□ -1.2
SGCE-203ENST00000425444 Q8NDZ9 215 aa7.55□□□□□ -1.2
SGCE-203ENST00000425444 LINC00587B1AMM8 73 aa7.54□□□□□ -1.2
SGCE-203ENST00000425444 DPM2O94777 84 aa7.54□□□□□ -1.2
SGCE-203ENST00000425444 CRYGAP11844 174 aa7.54□□□□□ -1.2
SGCE-203ENST00000425444 HERVK_113P61574 105 aa7.54□□□□□ -1.2
SGCE-203ENST00000425444 KRTAP13-1Q8IUC0 172 aa7.54□□□□□ -1.2
SGCE-203ENST00000425444 BOD1L2Q8IYS8 172 aa7.54□□□□□ -1.2
SGCE-203ENST00000425444 MIR7-3HGQ8N6C7 128 aa7.54□□□□□ -1.2
SGCE-203ENST00000425444 PMCHL2Q9BQD1 86 aa7.54□□□□□ -1.2
SGCE-203ENST00000425444 A0A087X002 238 aa7.53□□□□□ -1.2
SGCE-203ENST00000425444 M0R378 163 aa7.53□□□□□ -1.2
SGCE-203ENST00000425444 TYMSOSQ8TAI1 123 aa7.53□□□□□ -1.2
SGCE-203ENST00000425444 PLEKHB2Q96CS7 222 aa7.53□□□□□ -1.2
SGCE-203ENST00000425444 MAP1LC3CQ9BXW4 147 aa7.53□□□□□ -1.2
SGCE-203ENST00000425444 LEPROTO15243 131 aa7.52□□□□□ -1.21
SGCE-203ENST00000425444 IGKCP01834 107 aa7.52□□□□□ -1.21
SGCE-203ENST00000425444 NCR3O14931 201 aa7.51□□□□□ -1.21
SGCE-203ENST00000425444 TSPEAR-AS2P59090 65 aa7.51□□□□□ -1.21
SGCE-203ENST00000425444 ANAPC11Q9NYG5 84 aa7.51□□□□□ -1.21
SGCE-203ENST00000425444 J3QQQ9 107 aa7.5□□□□□ -1.21
SGCE-203ENST00000425444 LGALS3P17931 250 aaKnown RBP7.5□□□□□ -1.21
SGCE-203ENST00000425444 HIGD2AQ9BW72 106 aa7.5□□□□□ -1.21
SGCE-203ENST00000425444 TSPAN13O95857 204 aa7.49□□□□□ -1.21
SGCE-203ENST00000425444 MUC17Q685J3 4493 aa7.49□□□□□ -1.21
SGCE-203ENST00000425444 IGKV2D-26A0A0A0MRZ7 120 aa7.48□□□□□ -1.21
SGCE-203ENST00000425444 PRYO14603 147 aa7.48□□□□□ -1.21
SGCE-203ENST00000425444 HIST1H2BKO60814 126 aa7.48□□□□□ -1.21
SGCE-203ENST00000425444 HIST1H2BJP06899 126 aa7.48□□□□□ -1.21
SGCE-203ENST00000425444 HIST1H2BOP23527 126 aa7.48□□□□□ -1.21
SGCE-203ENST00000425444 HIST1H2BBP33778 126 aa7.48□□□□□ -1.21
SGCE-203ENST00000425444 NMUP48645 174 aa7.48□□□□□ -1.21
SGCE-203ENST00000425444 HIST1H2BDP58876 126 aa7.48□□□□□ -1.21
SGCE-203ENST00000425444 HIST1H2BCP62807 126 aa7.48□□□□□ -1.21
SGCE-203ENST00000425444 HIST2H2BEQ16778 126 aa7.48□□□□□ -1.21
SGCE-203ENST00000425444 FAM229BQ4G0N7 80 aa7.48□□□□□ -1.21
SGCE-203ENST00000425444 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.48□□□□□ -1.21
SGCE-203ENST00000425444 DAND5Q8N907 189 aa7.48□□□□□ -1.21
SGCE-203ENST00000425444 HIST1H2BHQ93079 126 aa7.48□□□□□ -1.21
SGCE-203ENST00000425444 HIST1H2BNQ99877 126 aa7.48□□□□□ -1.21
SGCE-203ENST00000425444 HIST1H2BMQ99879 126 aa7.48□□□□□ -1.21
SGCE-203ENST00000425444 MIEN1Q9BRT3 115 aa7.48□□□□□ -1.21
SGCE-203ENST00000425444 S100A12P80511 92 aa7.47□□□□□ -1.21
SGCE-203ENST00000425444 KRTAP13-2Q52LG2 175 aa7.46□□□□□ -1.22
SGCE-203ENST00000425444 TRBV10-3A0A0K0K1G6 114 aa7.45□□□□□ -1.22
SGCE-203ENST00000425444 ETDCA0A1B0GVM5 59 aa7.45□□□□□ -1.22
SGCE-203ENST00000425444 SYS1-DBNDD2H3BUS1 97 aa7.45□□□□□ -1.22
SGCE-203ENST00000425444 E9PLD3 99 aa7.44□□□□□ -1.22
SGCE-203ENST00000425444 LINC00337Q8N6G1 96 aa7.44□□□□□ -1.22
SGCE-203ENST00000425444 KCNQ1DNQ9H478 68 aa7.44□□□□□ -1.22
SGCE-203ENST00000425444 ZNF706Q9Y5V0 76 aaPredicted RBP7.44□□□□□ -1.22
SGCE-203ENST00000425444 DDTP30046 118 aa7.43□□□□□ -1.22
SGCE-203ENST00000425444 LINC00304Q8N9R0 145 aa7.43□□□□□ -1.22
SGCE-203ENST00000425444 SPANXB1Q9NS25 103 aaPredicted RBP7.43□□□□□ -1.22
SGCE-203ENST00000425444 LOC107984156A0A0G2JMH3 177 aa7.42□□□□□ -1.22
SGCE-203ENST00000425444 SPRR1AP35321 89 aa7.42□□□□□ -1.22
SGCE-203ENST00000425444 NPC2P61916 151 aa7.42□□□□□ -1.22
SGCE-203ENST00000425444 ARL17AQ8IVW1 177 aa7.42□□□□□ -1.22
SGCE-203ENST00000425444 A0A0J9YXY3 114 aa7.41□□□□□ -1.22
SGCE-203ENST00000425444 TRBV10-2A0A0K0K1G8 114 aa7.41□□□□□ -1.22
SGCE-203ENST00000425444 S100A7L2Q5SY68 101 aa7.41□□□□□ -1.22
SGCE-203ENST00000425444 PET117Q6UWS5 81 aa7.41□□□□□ -1.22
SGCE-203ENST00000425444 SPRR4Q96PI1 79 aa7.41□□□□□ -1.22
SGCE-203ENST00000425444 LINC01545Q5VT33 79 aa7.4□□□□□ -1.22
SGCE-203ENST00000425444 C3orf22Q8N5N4 141 aa7.4□□□□□ -1.22
SGCE-203ENST00000425444 NDUFC2O95298 119 aa7.39□□□□□ -1.23
SGCE-203ENST00000425444 SMCR5Q8TEV8 140 aa7.39□□□□□ -1.23
SGCE-203ENST00000425444 KRTAP4-16G5E9R7 235 aaPredicted RBP7.38□□□□□ -1.23
SGCE-203ENST00000425444 KRTDAPP60985 99 aa7.38□□□□□ -1.23
SGCE-203ENST00000425444 TRAV23DV6A0A075B6W5 121 aa7.37□□□□□ -1.23
SGCE-203ENST00000425444 ZNF815PA8K554 130 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms