RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 CLPSL2Q6UWE3 100 aa11.32□□□□□ -0.6
CMTM3-202ENST00000424011 LYPD5Q6UWN5 251 aa11.32□□□□□ -0.6
CMTM3-202ENST00000424011 CD164L2Q6UWJ8 174 aa11.31□□□□□ -0.6
CMTM3-202ENST00000424011 C11orf45Q8TAV5 145 aa11.31□□□□□ -0.6
CMTM3-202ENST00000424011 K7EIL1 84 aa11.31□□□□□ -0.6
CMTM3-202ENST00000424011 Q6JHZ5 121 aa11.3□□□□□ -0.6
CMTM3-202ENST00000424011 C6orf226Q5I0X4 101 aa11.29□□□□□ -0.6
CMTM3-202ENST00000424011 Q8N3U1 123 aa11.29□□□□□ -0.6
CMTM3-202ENST00000424011 CHCHD10Q8WYQ3 142 aaPredicted RBP11.29□□□□□ -0.6
CMTM3-202ENST00000424011 Q8IZM0 81 aa11.28□□□□□ -0.6
CMTM3-202ENST00000424011 DEFB131BA0A096LNP1 70 aa11.27□□□□□ -0.61
CMTM3-202ENST00000424011 IBA57-AS1B1ANH7 110 aa11.27□□□□□ -0.61
CMTM3-202ENST00000424011 MIR7-3HGQ8N6C7 128 aa11.27□□□□□ -0.61
CMTM3-202ENST00000424011 USP17L23D6RBM5 183 aa11.26□□□□□ -0.61
CMTM3-202ENST00000424011 MALP21145 153 aa11.26□□□□□ -0.61
CMTM3-202ENST00000424011 NANOS2P60321 138 aaKnown RBP11.26□□□□□ -0.61
CMTM3-202ENST00000424011 TM2D3Q9BRN9 247 aa11.26□□□□□ -0.61
CMTM3-202ENST00000424011 IGKV3D-7A0A0C4DH55 119 aa11.26□□□□□ -0.61
CMTM3-202ENST00000424011 FAM218AQ96MZ4 157 aa11.26□□□□□ -0.61
CMTM3-202ENST00000424011 PRR34Q9NV39 138 aa11.26□□□□□ -0.61
CMTM3-202ENST00000424011 DNAL4O96015 105 aa11.25□□□□□ -0.61
CMTM3-202ENST00000424011 A0A087WVE0 104 aa11.24□□□□□ -0.61
CMTM3-202ENST00000424011 NDUFC2-KCTD14E9PQ53 114 aa11.24□□□□□ -0.61
CMTM3-202ENST00000424011 LINC00158P58513 81 aa11.24□□□□□ -0.61
CMTM3-202ENST00000424011 KLK12Q9UKR0 248 aa11.24□□□□□ -0.61
CMTM3-202ENST00000424011 IGLV10-54A0A075B6I4 117 aa11.24□□□□□ -0.61
CMTM3-202ENST00000424011 CRPP02741 224 aa11.23□□□□□ -0.61
CMTM3-202ENST00000424011 PRO0628Q9UI54 55 aa11.23□□□□□ -0.61
CMTM3-202ENST00000424011 DNHD1Q96M86 4753 aa11.22□□□□□ -0.61
CMTM3-202ENST00000424011 NDUFC2O95298 119 aa11.21□□□□□ -0.61
CMTM3-202ENST00000424011 PFN2P35080 140 aa11.21□□□□□ -0.61
CMTM3-202ENST00000424011 TRAV10A0A0B4J240 114 aa11.21□□□□□ -0.62
CMTM3-202ENST00000424011 Q9HAA7 133 aa11.21□□□□□ -0.62
CMTM3-202ENST00000424011 LINC00846Q9NV44 126 aa11.21□□□□□ -0.62
CMTM3-202ENST00000424011 SND1-IT1Q9HBX3 110 aa11.2□□□□□ -0.62
CMTM3-202ENST00000424011 KRTAP21-3Q3LHN1 58 aa11.2□□□□□ -0.62
CMTM3-202ENST00000424011 ENHOQ6UWT2 76 aa11.2□□□□□ -0.62
CMTM3-202ENST00000424011 IGKV2-28A0A075B6P5 120 aa11.19□□□□□ -0.62
CMTM3-202ENST00000424011 IGKV2D-28P01615 120 aa11.19□□□□□ -0.62
CMTM3-202ENST00000424011 CCL18P55774 89 aa11.19□□□□□ -0.62
CMTM3-202ENST00000424011 ESRGQ1W209 222 aa11.19□□□□□ -0.62
CMTM3-202ENST00000424011 HUWE1Q7Z6Z7 4374 aaKnown RBP11.19□□□□□ -0.62
CMTM3-202ENST00000424011 WFDC10BQ8IUB3 73 aa11.19□□□□□ -0.62
CMTM3-202ENST00000424011 C14orf132Q9NPU4 83 aa11.19□□□□□ -0.62
CMTM3-202ENST00000424011 KIAA0087Q14695 138 aa11.18□□□□□ -0.62
CMTM3-202ENST00000424011 LINC00337Q8N6G1 96 aa11.18□□□□□ -0.62
CMTM3-202ENST00000424011 COX17Q14061 63 aa11.18□□□□□ -0.62
CMTM3-202ENST00000424011 OBSCN-AS1Q96MR7 158 aa11.18□□□□□ -0.62
CMTM3-202ENST00000424011 TENM3Q9P273 2699 aa11.17□□□□□ -0.62
CMTM3-202ENST00000424011 TRAV13-2A0A0B4J235 113 aa11.17□□□□□ -0.62
CMTM3-202ENST00000424011 EPM2AB3EWF7 344 aa11.17□□□□□ -0.62
CMTM3-202ENST00000424011 C9orf129Q5T035 196 aaKnown RBP11.17□□□□□ -0.62
CMTM3-202ENST00000424011 F8WDY8 70 aa11.16□□□□□ -0.62
CMTM3-202ENST00000424011 RPL28P46779 137 aaKnown RBP11.15□□□□□ -0.62
CMTM3-202ENST00000424011 LINC00336Q6ZUF6 198 aa11.15□□□□□ -0.62
CMTM3-202ENST00000424011 LINC01556Q5JQF7 62 aa11.14□□□□□ -0.63
CMTM3-202ENST00000424011 FAM236DA0A1B0GTK5 79 aa11.14□□□□□ -0.63
CMTM3-202ENST00000424011 FAM236CP0DP71 79 aa11.14□□□□□ -0.63
CMTM3-202ENST00000424011 SPAG11BQ08648 103 aa11.14□□□□□ -0.63
CMTM3-202ENST00000424011 GHRHP01286 108 aa11.13□□□□□ -0.63
CMTM3-202ENST00000424011 SERP1Q9Y6X1 66 aa11.13□□□□□ -0.63
CMTM3-202ENST00000424011 MUC7Q8TAX7 377 aa11.12□□□□□ -0.63
CMTM3-202ENST00000424011 DNAH9Q9NYC9 4486 aa11.12□□□□□ -0.63
CMTM3-202ENST00000424011 C1orf43Q9BWL3 253 aa11.11□□□□□ -0.63
CMTM3-202ENST00000424011 A0A087WYN8 130 aa11.1□□□□□ -0.63
CMTM3-202ENST00000424011 SMIM11BQ8TCY0 68 aa11.1□□□□□ -0.63
CMTM3-202ENST00000424011 B9D2Q9BPU9 175 aa11.09□□□□□ -0.63
CMTM3-202ENST00000424011 DNAH10OSP0CZ25 163 aa11.09□□□□□ -0.63
CMTM3-202ENST00000424011 C9orf116Q5BN46 136 aaPredicted RBP11.08□□□□□ -0.64
CMTM3-202ENST00000424011 C20orf197Q8N268 126 aa11.08□□□□□ -0.64
CMTM3-202ENST00000424011 ATP5EP2Q5VTU8 51 aa11.08□□□□□ -0.64
CMTM3-202ENST00000424011 S100A7L2Q5SY68 101 aa11.07□□□□□ -0.64
CMTM3-202ENST00000424011 C6orf223Q8N319 242 aa11.07□□□□□ -0.64
CMTM3-202ENST00000424011 TRAV23DV6A0A075B6W5 121 aa11.06□□□□□ -0.64
CMTM3-202ENST00000424011 GVQW2A0A096LPI5 108 aaPredicted RBP11.06□□□□□ -0.64
CMTM3-202ENST00000424011 H0YGX0 51 aa11.06□□□□□ -0.64
CMTM3-202ENST00000424011 NCR3O14931 201 aa11.06□□□□□ -0.64
CMTM3-202ENST00000424011 KRTAP26-1Q6PEX3 210 aa11.06□□□□□ -0.64
CMTM3-202ENST00000424011 UNQ6190/PRO20217Q6UXQ8 127 aa11.06□□□□□ -0.64
CMTM3-202ENST00000424011 ZNF561-AS1K7EIQ3 104 aa11.05□□□□□ -0.64
CMTM3-202ENST00000424011 CCKP06307 115 aa11.05□□□□□ -0.64
CMTM3-202ENST00000424011 C10orf25Q5T742 122 aa11.05□□□□□ -0.64
CMTM3-202ENST00000424011 H7BZZ5 65 aa11.04□□□□□ -0.64
CMTM3-202ENST00000424011 LINC00588Q9Y4M8 146 aa11.04□□□□□ -0.64
CMTM3-202ENST00000424011 PRR3P79522 188 aaKnown RBP11.04□□□□□ -0.64
CMTM3-202ENST00000424011 PKIGQ9Y2B9 76 aa11.03□□□□□ -0.64
CMTM3-202ENST00000424011 IGKV2D-24A0A075B6R9 120 aa11.02□□□□□ -0.65
CMTM3-202ENST00000424011 SMIM26A0A096LP01 95 aa11.02□□□□□ -0.65
CMTM3-202ENST00000424011 LECT2O14960 151 aa11.02□□□□□ -0.65
CMTM3-202ENST00000424011 COL7A1Q02388 2944 aa11.01□□□□□ -0.65
CMTM3-202ENST00000424011 FAM19A1Q7Z5A9 133 aa11.01□□□□□ -0.65
CMTM3-202ENST00000424011 TRBV10-3A0A0K0K1G6 114 aa11.01□□□□□ -0.65
CMTM3-202ENST00000424011 Q8NDZ9 215 aa11□□□□□ -0.65
CMTM3-202ENST00000424011 CAMK2N2Q96S95 79 aa11□□□□□ -0.65
CMTM3-202ENST00000424011 FP248Q71RG6 208 aaPredicted RBP11□□□□□ -0.65
CMTM3-202ENST00000424011 BCE1O60756 84 aa10.98□□□□□ -0.65
CMTM3-202ENST00000424011 HIGD2BQ4VC39 106 aa10.98□□□□□ -0.65
CMTM3-202ENST00000424011 C6orf48Q9UBA6 75 aa10.98□□□□□ -0.65
CMTM3-202ENST00000424011 C15orf56Q8N910 161 aa10.98□□□□□ -0.65
CMTM3-202ENST00000424011 ORMDL1Q9P0S3 153 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms