RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 ERG28Q9UKR5 140 aa5.84□□□□□ -1.47
PDGFC-202ENST00000422544 A0A0U1RRA0 63 aa5.83□□□□□ -1.48
PDGFC-202ENST00000422544 MYMXA0A1B0GTQ4 84 aa5.83□□□□□ -1.48
PDGFC-202ENST00000422544 HERV-K104P63124 156 aa5.83□□□□□ -1.48
PDGFC-202ENST00000422544 IGKV2D-26A0A0A0MRZ7 120 aa5.82□□□□□ -1.48
PDGFC-202ENST00000422544 EPM2AB3EWF7 344 aa5.82□□□□□ -1.48
PDGFC-202ENST00000422544 LINC00158P58513 81 aa5.82□□□□□ -1.48
PDGFC-202ENST00000422544 COX17Q14061 63 aa5.82□□□□□ -1.48
PDGFC-202ENST00000422544 MEIG1Q5JSS6 88 aa5.82□□□□□ -1.48
PDGFC-202ENST00000422544 KRTAP7-1Q8IUC3 87 aa5.82□□□□□ -1.48
PDGFC-202ENST00000422544 SCGB1D1O95968 90 aa5.81□□□□□ -1.48
PDGFC-202ENST00000422544 SMIM13P0DJ93 91 aa5.81□□□□□ -1.48
PDGFC-202ENST00000422544 NMUP48645 174 aa5.81□□□□□ -1.48
PDGFC-202ENST00000422544 AKR1D1P51857 326 aa5.81□□□□□ -1.48
PDGFC-202ENST00000422544 ANKRD39Q53RE8 183 aa5.81□□□□□ -1.48
PDGFC-202ENST00000422544 SERTAD4-AS1Q5TG53 156 aa5.81□□□□□ -1.48
PDGFC-202ENST00000422544 Q5VSD8 79 aa5.81□□□□□ -1.48
PDGFC-202ENST00000422544 FAM19A5Q7Z5A7 132 aaPredicted RBP5.81□□□□□ -1.48
PDGFC-202ENST00000422544 SND1-IT1Q9HBX3 110 aa5.81□□□□□ -1.48
PDGFC-202ENST00000422544 PHF5AQ7RTV0 110 aaKnown RBP5.8□□□□□ -1.48
PDGFC-202ENST00000422544 TTTY13Q9BZ97 58 aa5.8□□□□□ -1.48
PDGFC-202ENST00000422544 LINC00587B1AMM8 73 aa5.79□□□□□ -1.48
PDGFC-202ENST00000422544 RPL37AP61513 92 aaKnown RBP5.79□□□□□ -1.48
PDGFC-202ENST00000422544 MIR7-3HGQ8N6C7 128 aa5.79□□□□□ -1.48
PDGFC-202ENST00000422544 C7orf33Q8WU49 177 aa5.79□□□□□ -1.48
PDGFC-202ENST00000422544 A0A0J9YXY3 114 aa5.78□□□□□ -1.48
PDGFC-202ENST00000422544 ZNF815PA8K554 130 aa5.78□□□□□ -1.48
PDGFC-202ENST00000422544 M0QXV9 152 aa5.78□□□□□ -1.48
PDGFC-202ENST00000422544 PLA2G1BP04054 148 aaKnown RBP5.78□□□□□ -1.48
PDGFC-202ENST00000422544 DAND5Q8N907 189 aa5.78□□□□□ -1.48
PDGFC-202ENST00000422544 C22orf24Q9Y442 160 aa5.78□□□□□ -1.48
PDGFC-202ENST00000422544 LRP2P98164 4655 aa5.77□□□□□ -1.49
PDGFC-202ENST00000422544 HSBP1L1C9JCN9 74 aa5.77□□□□□ -1.49
PDGFC-202ENST00000422544 PCP2Q8IVA1 136 aa5.77□□□□□ -1.49
PDGFC-202ENST00000422544 PLA2G2DQ9UNK4 145 aa5.77□□□□□ -1.49
PDGFC-202ENST00000422544 RNF213Q63HN8 5207 aa5.76□□□□□ -1.49
PDGFC-202ENST00000422544 KRTAP10-4P60372 401 aaPredicted RBP5.76□□□□□ -1.49
PDGFC-202ENST00000422544 ADAMTSL4-AS1Q5T5F5 129 aa5.76□□□□□ -1.49
PDGFC-202ENST00000422544 KRTAP11-1Q8IUC1 163 aa5.76□□□□□ -1.49
PDGFC-202ENST00000422544 Q8NDZ9 215 aa5.76□□□□□ -1.49
PDGFC-202ENST00000422544 TNXBP22105 4242 aa5.76□□□□□ -1.49
PDGFC-202ENST00000422544 GAGE10A6NGK3 116 aa5.75□□□□□ -1.49
PDGFC-202ENST00000422544 VPREB1P12018 145 aa5.75□□□□□ -1.49
PDGFC-202ENST00000422544 UBE2BP63146 152 aa5.75□□□□□ -1.49
PDGFC-202ENST00000422544 RPL24P83731 157 aaKnown RBP5.75□□□□□ -1.49
PDGFC-202ENST00000422544 JOSD1Q15040 202 aaPredicted RBP5.75□□□□□ -1.49
PDGFC-202ENST00000422544 LBHQ53QV2 105 aaPredicted RBP5.75□□□□□ -1.49
PDGFC-202ENST00000422544 MRPL55Q7Z7F7 128 aaKnown RBP5.75□□□□□ -1.49
PDGFC-202ENST00000422544 BOD1L2Q8IYS8 172 aa5.75□□□□□ -1.49
PDGFC-202ENST00000422544 IGLV5-37A0A075B6J1 123 aa5.74□□□□□ -1.49
PDGFC-202ENST00000422544 NPC2P61916 151 aa5.74□□□□□ -1.49
PDGFC-202ENST00000422544 PRR3P79522 188 aaKnown RBP5.74□□□□□ -1.49
PDGFC-202ENST00000422544 SCGB1D4Q6XE38 83 aa5.74□□□□□ -1.49
PDGFC-202ENST00000422544 NKAPP1Q8N9T2 125 aa5.74□□□□□ -1.49
PDGFC-202ENST00000422544 LINC00167Q96N53 147 aa5.74□□□□□ -1.49
PDGFC-202ENST00000422544 LITAFQ99732 161 aa5.74□□□□□ -1.49
PDGFC-202ENST00000422544 TP73-AS1Q9UF72 201 aa5.74□□□□□ -1.49
PDGFC-202ENST00000422544 PSORS1C2Q9UIG4 136 aa5.74□□□□□ -1.49
PDGFC-202ENST00000422544 LOC107984156A0A0G2JMH3 177 aa5.73□□□□□ -1.49
PDGFC-202ENST00000422544 RPL37AP8A6NKH3 93 aa5.73□□□□□ -1.49
PDGFC-202ENST00000422544 TIMM17BO60830 172 aa5.73□□□□□ -1.49
PDGFC-202ENST00000422544 INAFM2P0DMQ5 153 aa5.73□□□□□ -1.49
PDGFC-202ENST00000422544 ARL17AQ8IVW1 177 aa5.73□□□□□ -1.49
PDGFC-202ENST00000422544 HNRNPA3P51991 378 aaKnown RBP5.72□□□□□ -1.49
PDGFC-202ENST00000422544 PYY3Q5JQD4 70 aa5.72□□□□□ -1.49
PDGFC-202ENST00000422544 C1orf137Q5JT78 98 aa5.72□□□□□ -1.49
PDGFC-202ENST00000422544 SOSTDC1Q6X4U4 206 aa5.72□□□□□ -1.49
PDGFC-202ENST00000422544 MIEN1Q9BRT3 115 aa5.72□□□□□ -1.49
PDGFC-202ENST00000422544 PAM16Q9Y3D7 125 aa5.72□□□□□ -1.49
PDGFC-202ENST00000422544 NCR3O14931 201 aa5.71□□□□□ -1.5
PDGFC-202ENST00000422544 LINC00308Q8TCZ7 52 aa5.71□□□□□ -1.5
PDGFC-202ENST00000422544 IGKV2-28A0A075B6P5 120 aa5.7□□□□□ -1.5
PDGFC-202ENST00000422544 LOC100996750A0A140TA64 210 aa5.7□□□□□ -1.5
PDGFC-202ENST00000422544 M0R378 163 aa5.7□□□□□ -1.5
PDGFC-202ENST00000422544 IGKV2D-28P01615 120 aa5.7□□□□□ -1.5
PDGFC-202ENST00000422544 SPATA45Q537H7 98 aa5.7□□□□□ -1.5
PDGFC-202ENST00000422544 VAMP8Q9BV40 100 aa5.7□□□□□ -1.5
PDGFC-202ENST00000422544 KRTAP4-6Q9BYQ5 205 aa5.7□□□□□ -1.5
PDGFC-202ENST00000422544 IGLV1-50A0A075B6I6 118 aa5.69□□□□□ -1.5
PDGFC-202ENST00000422544 TMEM238C9JI98 176 aa5.69□□□□□ -1.5
PDGFC-202ENST00000422544 COX8AP10176 69 aa5.69□□□□□ -1.5
PDGFC-202ENST00000422544 C14orf144Q96I85 54 aa5.69□□□□□ -1.5
PDGFC-202ENST00000422544 SPANXDQ9BXN6 97 aa5.69□□□□□ -1.5
PDGFC-202ENST00000422544 SPANXCQ9NY87 97 aa5.69□□□□□ -1.5
PDGFC-202ENST00000422544 NDUFC2O95298 119 aa5.68□□□□□ -1.5
PDGFC-202ENST00000422544 IGLV7-43P04211 117 aa5.68□□□□□ -1.5
PDGFC-202ENST00000422544 SRSF9Q13242 221 aaKnown RBP eCLIP5.68□□□□□ -1.5
PDGFC-202ENST00000422544 XP32Q5T750 250 aa5.68□□□□□ -1.5
PDGFC-202ENST00000422544 TRBV10-2A0A0K0K1G8 114 aa5.67□□□□□ -1.5
PDGFC-202ENST00000422544 Q6ZVH6 145 aa5.67□□□□□ -1.5
PDGFC-202ENST00000422544 MUSTN1Q8IVN3 82 aa5.67□□□□□ -1.5
PDGFC-202ENST00000422544 SPANXB1Q9NS25 103 aaPredicted RBP5.67□□□□□ -1.5
PDGFC-202ENST00000422544 TRBV10-3A0A0K0K1G6 114 aa5.66□□□□□ -1.5
PDGFC-202ENST00000422544 DLEU1O43261 78 aa5.66□□□□□ -1.5
PDGFC-202ENST00000422544 BCE1O60756 84 aa5.66□□□□□ -1.5
PDGFC-202ENST00000422544 IFITM1P13164 125 aa5.66□□□□□ -1.5
PDGFC-202ENST00000422544 REG3GQ6UW15 175 aa5.66□□□□□ -1.5
PDGFC-202ENST00000422544 SPINK6Q6UWN8 80 aa5.66□□□□□ -1.5
PDGFC-202ENST00000422544 DDTP30046 118 aa5.65□□□□□ -1.5
PDGFC-202ENST00000422544 S100A7L2Q5SY68 101 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms