RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 SYS1-DBNDD2H3BUS1 97 aa6.62□□□□□ -1.35
UFD1-203ENST00000421968 JOSD1Q15040 202 aaPredicted RBP6.62□□□□□ -1.35
UFD1-203ENST00000421968 PMCHL1Q16048 86 aa6.62□□□□□ -1.35
UFD1-203ENST00000421968 GAGE2EQ4V326 116 aa6.62□□□□□ -1.35
UFD1-203ENST00000421968 LINC00242Q5T6M2 205 aa6.62□□□□□ -1.35
UFD1-203ENST00000421968 TMEM101Q96IK0 257 aa6.62□□□□□ -1.35
UFD1-203ENST00000421968 GAGE2DQ9UEU5 116 aa6.62□□□□□ -1.35
UFD1-203ENST00000421968 IGLV8-61A0A075B6I0 122 aa6.61□□□□□ -1.35
UFD1-203ENST00000421968 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.61□□□□□ -1.35
UFD1-203ENST00000421968 IGKV2-29A2NJV5 120 aaPredicted RBP6.61□□□□□ -1.35
UFD1-203ENST00000421968 SMIM6P0DI80 62 aa6.61□□□□□ -1.35
UFD1-203ENST00000421968 FAM229BQ4G0N7 80 aa6.61□□□□□ -1.35
UFD1-203ENST00000421968 XP32Q5T750 250 aa6.61□□□□□ -1.35
UFD1-203ENST00000421968 C3orf79P0CE67 100 aa6.6□□□□□ -1.35
UFD1-203ENST00000421968 SEC11AP67812 179 aa6.6□□□□□ -1.35
UFD1-203ENST00000421968 PMVKQ15126 192 aa6.6□□□□□ -1.35
UFD1-203ENST00000421968 COX6B2Q6YFQ2 88 aa6.6□□□□□ -1.35
UFD1-203ENST00000421968 VCX2Q9H322 139 aa6.6□□□□□ -1.35
UFD1-203ENST00000421968 UBE2D4Q9Y2X8 147 aa6.6□□□□□ -1.35
UFD1-203ENST00000421968 COX7A2LO14548 114 aa6.59□□□□□ -1.35
UFD1-203ENST00000421968 CFC1P0CG37 223 aa6.59□□□□□ -1.35
UFD1-203ENST00000421968 KRTDAPP60985 99 aa6.59□□□□□ -1.35
UFD1-203ENST00000421968 KRTAP20-1Q3LI63 56 aa6.59□□□□□ -1.35
UFD1-203ENST00000421968 ANKRD39Q53RE8 183 aa6.59□□□□□ -1.35
UFD1-203ENST00000421968 LINC01545Q5VT33 79 aa6.59□□□□□ -1.35
UFD1-203ENST00000421968 AMELXQ99217 191 aa6.59□□□□□ -1.35
UFD1-203ENST00000421968 C2orf88Q9BSF0 95 aa6.59□□□□□ -1.35
UFD1-203ENST00000421968 FLGP20930 4061 aaPredicted RBP6.59□□□□□ -1.35
UFD1-203ENST00000421968 PLNP26678 52 aa6.58□□□□□ -1.36
UFD1-203ENST00000421968 RPL39P62891 51 aaKnown RBP6.58□□□□□ -1.36
UFD1-203ENST00000421968 TEX43Q6ZNM6 134 aa6.58□□□□□ -1.36
UFD1-203ENST00000421968 DAND5Q8N907 189 aa6.58□□□□□ -1.36
UFD1-203ENST00000421968 MRPL35Q9NZE8 188 aaKnown RBP6.58□□□□□ -1.36
UFD1-203ENST00000421968 IGLV4-3A0A075B6K6 122 aa6.57□□□□□ -1.36
UFD1-203ENST00000421968 F8VRH5 84 aa6.57□□□□□ -1.36
UFD1-203ENST00000421968 SCGB1D1O95968 90 aa6.57□□□□□ -1.36
UFD1-203ENST00000421968 SPAG11BQ08648 103 aa6.57□□□□□ -1.36
UFD1-203ENST00000421968 SPAG11AQ6PDA7 123 aa6.57□□□□□ -1.36
UFD1-203ENST00000421968 FAM19A3Q7Z5A8 133 aa6.57□□□□□ -1.36
UFD1-203ENST00000421968 CST9LQ9H4G1 147 aa6.57□□□□□ -1.36
UFD1-203ENST00000421968 CDC42SE2Q9NRR3 84 aa6.57□□□□□ -1.36
UFD1-203ENST00000421968 TLX1NBP0CAT3 122 aa6.56□□□□□ -1.36
UFD1-203ENST00000421968 S100A12P80511 92 aa6.56□□□□□ -1.36
UFD1-203ENST00000421968 BCE1O60756 84 aa6.55□□□□□ -1.36
UFD1-203ENST00000421968 DPM2O94777 84 aa6.55□□□□□ -1.36
UFD1-203ENST00000421968 PCOTHQ58A44 107 aa6.55□□□□□ -1.36
UFD1-203ENST00000421968 PYY3Q5JQD4 70 aa6.55□□□□□ -1.36
UFD1-203ENST00000421968 CHTOPQ9Y3Y2 248 aaKnown RBP6.55□□□□□ -1.36
UFD1-203ENST00000421968 NEBP20929 6669 aa6.55□□□□□ -1.36
UFD1-203ENST00000421968 TINCRA0A1B0GVN0 87 aa6.54□□□□□ -1.36
UFD1-203ENST00000421968 HSBP1L1C9JCN9 74 aa6.54□□□□□ -1.36
UFD1-203ENST00000421968 IGKCP01834 107 aa6.54□□□□□ -1.36
UFD1-203ENST00000421968 NDUFA1O15239 70 aa6.53□□□□□ -1.36
UFD1-203ENST00000421968 IGLC3P0DOY3 106 aa6.53□□□□□ -1.36
UFD1-203ENST00000421968 HERVK_113P63121 156 aa6.53□□□□□ -1.36
UFD1-203ENST00000421968 C10orf25Q5T742 122 aa6.53□□□□□ -1.36
UFD1-203ENST00000421968 C5orf38Q86SI9 138 aa6.53□□□□□ -1.36
UFD1-203ENST00000421968 LINC01561Q8N1V8 128 aa6.53□□□□□ -1.36
UFD1-203ENST00000421968 FAM104AQ969W3 186 aa6.53□□□□□ -1.36
UFD1-203ENST00000421968 LINC00518Q8N0U6 118 aa6.52□□□□□ -1.37
UFD1-203ENST00000421968 C6orf48Q9UBA6 75 aa6.52□□□□□ -1.37
UFD1-203ENST00000421968 IGLV5-45A0A087WSX0 123 aa6.51□□□□□ -1.37
UFD1-203ENST00000421968 C11orf86A6NJI1 115 aa6.51□□□□□ -1.37
UFD1-203ENST00000421968 H3BRM9 83 aa6.51□□□□□ -1.37
UFD1-203ENST00000421968 HERVK_113P61574 105 aa6.51□□□□□ -1.37
UFD1-203ENST00000421968 C9orf129Q5T035 196 aaKnown RBP6.51□□□□□ -1.37
UFD1-203ENST00000421968 UNQ6190/PRO20217Q6UXQ8 127 aa6.51□□□□□ -1.37
UFD1-203ENST00000421968 Q6ZUT4 128 aa6.51□□□□□ -1.37
UFD1-203ENST00000421968 C3orf22Q8N5N4 141 aa6.51□□□□□ -1.37
UFD1-203ENST00000421968 VAMP8Q9BV40 100 aa6.51□□□□□ -1.37
UFD1-203ENST00000421968 LINC00846Q9NV44 126 aa6.51□□□□□ -1.37
UFD1-203ENST00000421968 C22orf24Q9Y442 160 aa6.51□□□□□ -1.37
UFD1-203ENST00000421968 H0Y8G0 127 aa6.5□□□□□ -1.37
UFD1-203ENST00000421968 LBHQ53QV2 105 aaPredicted RBP6.5□□□□□ -1.37
UFD1-203ENST00000421968 C12orf57Q99622 126 aa6.5□□□□□ -1.37
UFD1-203ENST00000421968 GEMIN7Q9H840 131 aaKnown RBP6.5□□□□□ -1.37
UFD1-203ENST00000421968 NDUFA12Q9UI09 145 aa6.5□□□□□ -1.37
UFD1-203ENST00000421968 F8WDY8 70 aa6.49□□□□□ -1.37
UFD1-203ENST00000421968 ORAOV1Q8WV07 137 aa6.49□□□□□ -1.37
UFD1-203ENST00000421968 SFTA2Q6UW10 78 aa6.48□□□□□ -1.37
UFD1-203ENST00000421968 PMCHL2Q9BQD1 86 aa6.48□□□□□ -1.37
UFD1-203ENST00000421968 E9PLD3 99 aa6.47□□□□□ -1.37
UFD1-203ENST00000421968 H3BS24 57 aa6.47□□□□□ -1.37
UFD1-203ENST00000421968 UBE2AP49459 152 aa6.47□□□□□ -1.37
UFD1-203ENST00000421968 ZC2HC1BQ5TFG8 222 aa6.47□□□□□ -1.37
UFD1-203ENST00000421968 TRAV13-1A0A0B4J241 112 aa6.46□□□□□ -1.38
UFD1-203ENST00000421968 IGHV3OR16-9A0A0B4J2B5 98 aa6.46□□□□□ -1.38
UFD1-203ENST00000421968 DLEU1O43261 78 aa6.46□□□□□ -1.38
UFD1-203ENST00000421968 ZNF22P17026 224 aaPredicted RBP6.46□□□□□ -1.38
UFD1-203ENST00000421968 TMEM170BQ5T4T1 132 aa6.46□□□□□ -1.38
UFD1-203ENST00000421968 PLEKHB2Q96CS7 222 aa6.46□□□□□ -1.38
UFD1-203ENST00000421968 KRTAP9-8Q9BYQ0 159 aa6.46□□□□□ -1.38
UFD1-203ENST00000421968 TMEM223A0PJW6 202 aa6.45□□□□□ -1.38
UFD1-203ENST00000421968 NDUFC2-KCTD14E9PQ53 114 aa6.45□□□□□ -1.38
UFD1-203ENST00000421968 TSTD3H0UI37 97 aa6.45□□□□□ -1.38
UFD1-203ENST00000421968 NMUP48645 174 aa6.45□□□□□ -1.38
UFD1-203ENST00000421968 SPATA45Q537H7 98 aa6.45□□□□□ -1.38
UFD1-203ENST00000421968 LINC00469Q8N7U9 141 aa6.45□□□□□ -1.38
UFD1-203ENST00000421968 LEPROTO15243 131 aa6.44□□□□□ -1.38
UFD1-203ENST00000421968 KRTAP13-1Q8IUC0 172 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms