RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 A0A087WVE0 104 aa9.06□□□□□ -0.96
MCF2L-213ENST00000421756 NHLRC4P0CG21 123 aaPredicted RBP9.06□□□□□ -0.96
MCF2L-213ENST00000421756 MIFP14174 115 aa9.06□□□□□ -0.96
MCF2L-213ENST00000421756 CXCL5P42830 114 aa9.06□□□□□ -0.96
MCF2L-213ENST00000421756 ZNF561-AS1K7EIQ3 104 aa9.06□□□□□ -0.96
MCF2L-213ENST00000421756 HIST1H4AP62805 103 aaKnown RBP9.06□□□□□ -0.96
MCF2L-213ENST00000421756 LYPD5Q6UWN5 251 aa9.06□□□□□ -0.96
MCF2L-213ENST00000421756 LINC00612Q8N6U2 182 aa9.06□□□□□ -0.96
MCF2L-213ENST00000421756 ENHOQ6UWT2 76 aa9.05□□□□□ -0.96
MCF2L-213ENST00000421756 LAMTOR3Q9UHA4 124 aa9.05□□□□□ -0.96
MCF2L-213ENST00000421756 CAMK2N2Q96S95 79 aa9.04□□□□□ -0.96
MCF2L-213ENST00000421756 ORMDL1Q9P0S3 153 aa9.04□□□□□ -0.96
MCF2L-213ENST00000421756 KRTAP24-1Q3LI83 254 aa9.03□□□□□ -0.96
MCF2L-213ENST00000421756 LELP1Q5T871 98 aa9.03□□□□□ -0.96
MCF2L-213ENST00000421756 LINC00846Q9NV44 126 aa9.02□□□□□ -0.96
MCF2L-213ENST00000421756 H0YGX0 51 aa9.02□□□□□ -0.97
MCF2L-213ENST00000421756 TMEM126AQ9H061 195 aa9.01□□□□□ -0.97
MCF2L-213ENST00000421756 INAFM2P0DMQ5 153 aa9.01□□□□□ -0.97
MCF2L-213ENST00000421756 ESRGQ1W209 222 aa9□□□□□ -0.97
MCF2L-213ENST00000421756 DEFB131BA0A096LNP1 70 aa9□□□□□ -0.97
MCF2L-213ENST00000421756 TRBV10-3A0A0K0K1G6 114 aa9□□□□□ -0.97
MCF2L-213ENST00000421756 M0QXV9 152 aa9□□□□□ -0.97
MCF2L-213ENST00000421756 C6orf48Q9UBA6 75 aa8.99□□□□□ -0.97
MCF2L-213ENST00000421756 Q6ZQY7 126 aa8.98□□□□□ -0.97
MCF2L-213ENST00000421756 DEFB105AQ8NG35 78 aa8.98□□□□□ -0.97
MCF2L-213ENST00000421756 Q8N814 137 aa8.98□□□□□ -0.97
MCF2L-213ENST00000421756 Q6ZRU5 148 aa8.97□□□□□ -0.97
MCF2L-213ENST00000421756 C11orf45Q8TAV5 145 aa8.97□□□□□ -0.97
MCF2L-213ENST00000421756 C1orf43Q9BWL3 253 aa8.96□□□□□ -0.97
MCF2L-213ENST00000421756 SCXQ7RTU7 201 aa8.96□□□□□ -0.98
MCF2L-213ENST00000421756 M0R2N4 97 aa8.95□□□□□ -0.98
MCF2L-213ENST00000421756 LINC00643Q86TS7 51 aa8.95□□□□□ -0.98
MCF2L-213ENST00000421756 HAMPP81172 84 aa8.94□□□□□ -0.98
MCF2L-213ENST00000421756 KLK5Q9Y337 293 aaPredicted RBP8.93□□□□□ -0.98
MCF2L-213ENST00000421756 hADV29S1A0JD25 119 aa8.93□□□□□ -0.98
MCF2L-213ENST00000421756 RPL37AP8A6NKH3 93 aa8.93□□□□□ -0.98
MCF2L-213ENST00000421756 FAM240AA0A1B0GVK7 77 aa8.92□□□□□ -0.98
MCF2L-213ENST00000421756 CASC10Q5T4H9 136 aa8.92□□□□□ -0.98
MCF2L-213ENST00000421756 TRAV23DV6A0A075B6W5 121 aa8.91□□□□□ -0.98
MCF2L-213ENST00000421756 ACYP1P07311 99 aa8.91□□□□□ -0.98
MCF2L-213ENST00000421756 SRRM2Q9UQ35 2752 aaKnown RBP8.91□□□□□ -0.98
MCF2L-213ENST00000421756 FAM19A1Q7Z5A9 133 aa8.91□□□□□ -0.98
MCF2L-213ENST00000421756 C9orf153Q5TBE3 101 aa8.9□□□□□ -0.98
MCF2L-213ENST00000421756 A0A1B0GX51 115 aa8.89□□□□□ -0.99
MCF2L-213ENST00000421756 SMIM20Q8N5G0 67 aa8.89□□□□□ -0.99
MCF2L-213ENST00000421756 TMEM256-PLSCR3K7ERE1 68 aa8.88□□□□□ -0.99
MCF2L-213ENST00000421756 COX17Q14061 63 aa8.88□□□□□ -0.99
MCF2L-213ENST00000421756 PRR34Q9NV39 138 aa8.88□□□□□ -0.99
MCF2L-213ENST00000421756 LINC00575Q6W349 94 aa8.88□□□□□ -0.99
MCF2L-213ENST00000421756 RBM3P98179 157 aaKnown RBP8.88□□□□□ -0.99
MCF2L-213ENST00000421756 Q6ZRP5 223 aa8.87□□□□□ -0.99
MCF2L-213ENST00000421756 DIRC1Q969H9 104 aa8.87□□□□□ -0.99
MCF2L-213ENST00000421756 ZNF73O43830 326 aaPredicted RBP8.87□□□□□ -0.99
MCF2L-213ENST00000421756 FAM168BA1KXE4 195 aa8.87□□□□□ -0.99
MCF2L-213ENST00000421756 C3orf22Q8N5N4 141 aa8.87□□□□□ -0.99
MCF2L-213ENST00000421756 TRBV7-7A0A0K0K1E9 115 aa8.86□□□□□ -0.99
MCF2L-213ENST00000421756 C15orf56Q8N910 161 aa8.86□□□□□ -0.99
MCF2L-213ENST00000421756 LINC01600Q96MT4 127 aa8.86□□□□□ -0.99
MCF2L-213ENST00000421756 NDUFC2O95298 119 aa8.85□□□□□ -0.99
MCF2L-213ENST00000421756 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.85□□□□□ -0.99
MCF2L-213ENST00000421756 IGKV2-24A0A0C4DH68 120 aa8.84□□□□□ -0.99
MCF2L-213ENST00000421756 Q6Q795 121 aa8.84□□□□□ -0.99
MCF2L-213ENST00000421756 NKAPP1Q8N9T2 125 aa8.84□□□□□ -0.99
MCF2L-213ENST00000421756 COL7A1Q02388 2944 aa8.84□□□□□ -0.99
MCF2L-213ENST00000421756 COX7BP24311 80 aa8.84□□□□□ -0.99
MCF2L-213ENST00000421756 DSCR8Q96T75 97 aa8.84□□□□□ -0.99
MCF2L-213ENST00000421756 CCKP06307 115 aa8.84□□□□□ -0.99
MCF2L-213ENST00000421756 LINC01561Q8N1V8 128 aa8.84□□□□□ -0.99
MCF2L-213ENST00000421756 SYCNQ0VAF6 134 aa8.83□□□□□ -1
MCF2L-213ENST00000421756 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.83□□□□□ -1
MCF2L-213ENST00000421756 FAM19A5Q7Z5A7 132 aaPredicted RBP8.83□□□□□ -1
MCF2L-213ENST00000421756 UBL5Q9BZL1 73 aa8.82□□□□□ -1
MCF2L-213ENST00000421756 SERTAD4-AS1Q5TG53 156 aa8.82□□□□□ -1
MCF2L-213ENST00000421756 JMJD7-PLA2G4BH0Y9G9 81 aa8.82□□□□□ -1
MCF2L-213ENST00000421756 C3orf84H3BNL1 204 aa8.82□□□□□ -1
MCF2L-213ENST00000421756 Q8N9L7 120 aa8.82□□□□□ -1
MCF2L-213ENST00000421756 LYSTQ99698 3801 aa8.81□□□□□ -1
MCF2L-213ENST00000421756 IGLV6-57P01721 117 aa8.8□□□□□ -1
MCF2L-213ENST00000421756 LINC00588Q9Y4M8 146 aa8.8□□□□□ -1
MCF2L-213ENST00000421756 USP17L23D6RBM5 183 aa8.8□□□□□ -1
MCF2L-213ENST00000421756 NDUFC2-KCTD14E9PQ53 114 aa8.79□□□□□ -1
MCF2L-213ENST00000421756 CYSTM1Q9H1C7 97 aa8.79□□□□□ -1
MCF2L-213ENST00000421756 VPREB1P12018 145 aa8.79□□□□□ -1
MCF2L-213ENST00000421756 A0A0G2JQZ4 141 aa8.79□□□□□ -1
MCF2L-213ENST00000421756 A0A1W2PNN7 141 aa8.79□□□□□ -1
MCF2L-213ENST00000421756 UPK3BQ9BT76 320 aa8.78□□□□□ -1
MCF2L-213ENST00000421756 GHRHP01286 108 aa8.76□□□□□ -1.01
MCF2L-213ENST00000421756 EGFEM1PQ0D2K5 195 aa8.76□□□□□ -1.01
MCF2L-213ENST00000421756 FUSP35637 526 aaKnown RBP eCLIP8.76□□□□□ -1.019e-6■■■□□ 18.4
MCF2L-213ENST00000421756 KRTAP26-1Q6PEX3 210 aa8.76□□□□□ -1.01
MCF2L-213ENST00000421756 PSCAO43653 123 aa8.75□□□□□ -1.01
MCF2L-213ENST00000421756 M0R378 163 aa8.75□□□□□ -1.01
MCF2L-213ENST00000421756 C7orf33Q8WU49 177 aa8.75□□□□□ -1.01
MCF2L-213ENST00000421756 DPH3Q96FX2 82 aa8.75□□□□□ -1.01
MCF2L-213ENST00000421756 OBSCN-AS1Q96MR7 158 aa8.75□□□□□ -1.01
MCF2L-213ENST00000421756 IMUPQ9GZP8 106 aa8.75□□□□□ -1.01
MCF2L-213ENST00000421756 LOC107984640A0A0U1RRK4 108 aa8.74□□□□□ -1.01
MCF2L-213ENST00000421756 K7EIL1 84 aa8.74□□□□□ -1.01
MCF2L-213ENST00000421756 Q6ZQT0 140 aa8.74□□□□□ -1.01
MCF2L-213ENST00000421756 ST20-AS1Q8NBB2 130 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms