RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 LINC00242Q5T6M2 205 aa2.47□□□□□ -2.01
CNGA1-203ENST00000420489 Q8TAT8 98 aa2.47□□□□□ -2.01
CNGA1-203ENST00000420489 TRAV12-1A0A0B4J245 112 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 ZNF73O43830 326 aaPredicted RBP2.46□□□□□ -2.02
CNGA1-203ENST00000420489 SCGB1C2P0DMR2 95 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 HERVK_113P61574 105 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 ORMDL2Q53FV1 153 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 SPANXN1Q5VSR9 72 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 SFTA2Q6UW10 78 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 Q8NAQ8 132 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 SCGB3A1Q96QR1 104 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 IMUPQ9GZP8 106 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 XCL2Q9UBD3 114 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 DSCAML1Q8TD84 2053 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 IGLV5-37A0A075B6J1 123 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 IGHV1-3A0A0C4DH29 117 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 K7EIM0 57 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 ATP6V0E1O15342 81 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 MP68P56378 58 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 REG3AQ06141 175 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 DEFB114Q30KQ6 69 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 RNF182Q8N6D2 247 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 AGPAT4-IT1Q9H0P7 198 aa2.46□□□□□ -2.02
CNGA1-203ENST00000420489 IGHV3OR16-8A0A075B7F1 116 aa2.45□□□□□ -2.02
CNGA1-203ENST00000420489 M0R378 163 aa2.45□□□□□ -2.02
CNGA1-203ENST00000420489 ZNF80P51504 273 aaPredicted RBP2.45□□□□□ -2.02
CNGA1-203ENST00000420489 UBE2D1P51668 147 aa2.45□□□□□ -2.02
CNGA1-203ENST00000420489 UBE2D3P61077 147 aa2.45□□□□□ -2.02
CNGA1-203ENST00000420489 UBE2D2P62837 147 aa2.45□□□□□ -2.02
CNGA1-203ENST00000420489 RNF5Q99942 180 aa2.45□□□□□ -2.02
CNGA1-203ENST00000420489 SMIM2Q9BVW6 85 aa2.45□□□□□ -2.02
CNGA1-203ENST00000420489 TRAV12-2A0A075B6T6 113 aa2.45□□□□□ -2.02
CNGA1-203ENST00000420489 IGHV1-58A0A0C4DH39 117 aa2.45□□□□□ -2.02
CNGA1-203ENST00000420489 PSPHP1O15172 72 aa2.45□□□□□ -2.02
CNGA1-203ENST00000420489 KRTAP19-6Q3LI70 58 aa2.45□□□□□ -2.02
CNGA1-203ENST00000420489 REG3GQ6UW15 175 aa2.45□□□□□ -2.02
CNGA1-203ENST00000420489 ZFP2Q6ZN57 461 aa2.45□□□□□ -2.02
CNGA1-203ENST00000420489 DSCR8Q96T75 97 aa2.45□□□□□ -2.02
CNGA1-203ENST00000420489 SLC50A1Q9BRV3 221 aa2.45□□□□□ -2.02
CNGA1-203ENST00000420489 IGLV5-52A0A0A0MRZ9 124 aa2.44□□□□□ -2.02
CNGA1-203ENST00000420489 RBAKDNA6NC62 111 aa2.44□□□□□ -2.02
CNGA1-203ENST00000420489 SLC25A20O43772 301 aa2.44□□□□□ -2.02
CNGA1-203ENST00000420489 TCL1BO95988 128 aa2.44□□□□□ -2.02
CNGA1-203ENST00000420489 TRACP01848 142 aa2.44□□□□□ -2.02
CNGA1-203ENST00000420489 TRGV3P03979 118 aa2.44□□□□□ -2.02
CNGA1-203ENST00000420489 CCL18P55774 89 aa2.44□□□□□ -2.02
CNGA1-203ENST00000420489 SNRPD3P62318 126 aaKnown RBP2.44□□□□□ -2.02
CNGA1-203ENST00000420489 TOMM6Q96B49 74 aa2.44□□□□□ -2.02
CNGA1-203ENST00000420489 PRO1854Q9UHT4 67 aa2.44□□□□□ -2.02
CNGA1-203ENST00000420489 ZNF706Q9Y5V0 76 aaPredicted RBP2.44□□□□□ -2.02
CNGA1-203ENST00000420489 S4R3C0 116 aa2.44□□□□□ -2.02
CNGA1-203ENST00000420489 NACAE9PAV3 2078 aa2.44□□□□□ -2.02
CNGA1-203ENST00000420489 IGHV6-1A0A0B4J1U7 121 aa2.44□□□□□ -2.02
CNGA1-203ENST00000420489 TRBV7-7A0A0K0K1E9 115 aa2.44□□□□□ -2.02
CNGA1-203ENST00000420489 NDUFC2-KCTD14E9PQ53 114 aa2.44□□□□□ -2.02
CNGA1-203ENST00000420489 K7EQD1 137 aa2.44□□□□□ -2.02
CNGA1-203ENST00000420489 COX7A2LO14548 114 aa2.44□□□□□ -2.02
CNGA1-203ENST00000420489 PPP1R17O96001 155 aa2.44□□□□□ -2.02
CNGA1-203ENST00000420489 C2orf66Q6UXQ4 117 aa2.44□□□□□ -2.02
CNGA1-203ENST00000420489 TIMM17AQ99595 171 aa2.44□□□□□ -2.02
CNGA1-203ENST00000420489 IGHV7-81A0A0B4J1V7 117 aa2.43□□□□□ -2.02
CNGA1-203ENST00000420489 IGKV3D-20A0A0C4DH25 116 aa2.43□□□□□ -2.02
CNGA1-203ENST00000420489 TMEM256-PLSCR3K7ERE1 68 aa2.43□□□□□ -2.02
CNGA1-203ENST00000420489 COX7CP15954 63 aa2.43□□□□□ -2.02
CNGA1-203ENST00000420489 Q1RN00 199 aa2.43□□□□□ -2.02
CNGA1-203ENST00000420489 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
CNGA1-203ENST00000420489 DPH3P1Q9H4G8 78 aa2.43□□□□□ -2.02
CNGA1-203ENST00000420489 IGLV11-55A0A075B6I3 123 aa2.43□□□□□ -2.02
CNGA1-203ENST00000420489 A0A0J9YY99 117 aa2.43□□□□□ -2.02
CNGA1-203ENST00000420489 DEFB4AO15263 64 aa2.43□□□□□ -2.02
CNGA1-203ENST00000420489 LGALS3P17931 250 aaKnown RBP2.43□□□□□ -2.02
CNGA1-203ENST00000420489 S100A4P26447 101 aaKnown RBP2.43□□□□□ -2.02
CNGA1-203ENST00000420489 ATXN8Q156A1 80 aa2.43□□□□□ -2.02
CNGA1-203ENST00000420489 LCA10Q71F78 164 aa2.43□□□□□ -2.02
CNGA1-203ENST00000420489 IGHV7-4-1A0A0J9YVY3 117 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 H3BT86 120 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 UBE2L6O14933 153 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 IGHV3-23P01764 117 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 MGPP08493 103 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 TMEM170BQ5T4T1 132 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 NOTCH2NLQ7Z3S9 236 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 TMEM243Q9BU79 118 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 PHLDA3Q9Y5J5 127 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 IGHV3OR16-13A0A075B7E8 117 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.42□□□□□ -2.02
CNGA1-203ENST00000420489 IGHV3-35A0A0C4DH35 117 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 PRAC2D3DTV9 90 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 H3BMM0 161 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 H7C2G1 150 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 IGHV3-30P01768 117 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 IGHV3-30-5P0DP03 117 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 FP248Q71RG6 208 aaPredicted RBP2.42□□□□□ -2.02
CNGA1-203ENST00000420489 TMEM61Q8N0U2 210 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 SLC25A29Q8N8R3 303 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 UBE2WQ96B02 151 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 SERP1Q9Y6X1 66 aa2.42□□□□□ -2.02
CNGA1-203ENST00000420489 TRAV2A0A0B4J234 112 aa2.41□□□□□ -2.02
CNGA1-203ENST00000420489 A0A0B4J2C4 111 aa2.41□□□□□ -2.02
CNGA1-203ENST00000420489 C11orf86A6NJI1 115 aa2.41□□□□□ -2.02
CNGA1-203ENST00000420489 CTSGP08311 255 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms