RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 PPDPFLQ8WWR9 84 aa13.87□□□□□ -0.19
GPC1-202ENST00000420138 LINC01600Q96MT4 127 aa13.87□□□□□ -0.19
GPC1-202ENST00000420138 TRBV10-2A0A0K0K1G8 114 aa13.86□□□□□ -0.19
GPC1-202ENST00000420138 CASC10Q5T4H9 136 aa13.86□□□□□ -0.19
GPC1-202ENST00000420138 GVQW2A0A096LPI5 108 aaPredicted RBP13.85□□□□□ -0.19
GPC1-202ENST00000420138 ANKRD29Q8N6D5 301 aa13.85□□□□□ -0.19
GPC1-202ENST00000420138 IGKV2-28A0A075B6P5 120 aa13.85□□□□□ -0.19
GPC1-202ENST00000420138 IGKV2D-28P01615 120 aa13.85□□□□□ -0.19
GPC1-202ENST00000420138 C6orf48Q9UBA6 75 aa13.85□□□□□ -0.19
GPC1-202ENST00000420138 ZNF561-AS1K7EIQ3 104 aa13.83□□□□□ -0.2
GPC1-202ENST00000420138 LINC00337Q8N6G1 96 aa13.83□□□□□ -0.2
GPC1-202ENST00000420138 CARD19Q96LW7 228 aa13.83□□□□□ -0.2
GPC1-202ENST00000420138 TENM2Q9NT68 2774 aa13.83□□□□□ -0.2
GPC1-202ENST00000420138 C2orf48Q96LS8 159 aa13.82□□□□□ -0.2
GPC1-202ENST00000420138 RPL28P46779 137 aaKnown RBP13.8□□□□□ -0.2
GPC1-202ENST00000420138 RMI2Q96E14 147 aa13.8□□□□□ -0.2
GPC1-202ENST00000420138 CAMK2N2Q96S95 79 aa13.8□□□□□ -0.2
GPC1-202ENST00000420138 H3BT86 120 aa13.8□□□□□ -0.2
GPC1-202ENST00000420138 Q6ZRU5 148 aa13.79□□□□□ -0.2
GPC1-202ENST00000420138 VPS13DQ5THJ4 4388 aa13.77□□□□□ -0.2
GPC1-202ENST00000420138 USP17L23D6RBM5 183 aa13.77□□□□□ -0.21
GPC1-202ENST00000420138 F8WDY8 70 aa13.75□□□□□ -0.21
GPC1-202ENST00000420138 Q8NDZ9 215 aa13.75□□□□□ -0.21
GPC1-202ENST00000420138 DNAH10Q8IVF4 4471 aa13.74□□□□□ -0.21
GPC1-202ENST00000420138 SLPIP03973 132 aa13.74□□□□□ -0.21
GPC1-202ENST00000420138 SMIM11BQ8TCY0 68 aa13.74□□□□□ -0.21
GPC1-202ENST00000420138 TRACP01848 142 aa13.74□□□□□ -0.21
GPC1-202ENST00000420138 C3orf84H3BNL1 204 aa13.72□□□□□ -0.21
GPC1-202ENST00000420138 NDUFC2O95298 119 aa13.72□□□□□ -0.21
GPC1-202ENST00000420138 SYCNQ0VAF6 134 aa13.72□□□□□ -0.21
GPC1-202ENST00000420138 NBDYA0A0U1RRE5 68 aa13.71□□□□□ -0.21
GPC1-202ENST00000420138 OR13C6PQ8NH95 151 aa13.71□□□□□ -0.21
GPC1-202ENST00000420138 LECT2O14960 151 aa13.71□□□□□ -0.22
GPC1-202ENST00000420138 PCP4P48539 62 aa13.71□□□□□ -0.22
GPC1-202ENST00000420138 PRR3P79522 188 aaKnown RBP13.71□□□□□ -0.22
GPC1-202ENST00000420138 TTC32Q5I0X7 151 aa13.69□□□□□ -0.22
GPC1-202ENST00000420138 FAM218AQ96MZ4 157 aa13.69□□□□□ -0.22
GPC1-202ENST00000420138 TEX49A0A1B0GTD5 131 aa13.69□□□□□ -0.22
GPC1-202ENST00000420138 H0YGX0 51 aa13.69□□□□□ -0.22
GPC1-202ENST00000420138 SIGMAR1Q99720 223 aa13.69□□□□□ -0.22
GPC1-202ENST00000420138 NDUFC2-KCTD14E9PQ53 114 aa13.68□□□□□ -0.22
GPC1-202ENST00000420138 XAGE1AQ9HD64 81 aa13.67□□□□□ -0.22
GPC1-202ENST00000420138 Q6ZRP5 223 aa13.66□□□□□ -0.22
GPC1-202ENST00000420138 CDIP1Q9H305 208 aa13.65□□□□□ -0.22
GPC1-202ENST00000420138 LY6G6CO95867 125 aa13.64□□□□□ -0.23
GPC1-202ENST00000420138 Q6ZRN7 208 aaPredicted RBP13.63□□□□□ -0.23
GPC1-202ENST00000420138 BAALC-AS2P0C853 105 aa13.62□□□□□ -0.23
GPC1-202ENST00000420138 TMEM126AQ9H061 195 aa13.62□□□□□ -0.23
GPC1-202ENST00000420138 TLX1NBP0CAT3 122 aa13.62□□□□□ -0.23
GPC1-202ENST00000420138 M0R2N4 97 aa13.61□□□□□ -0.23
GPC1-202ENST00000420138 NCR3O14931 201 aa13.61□□□□□ -0.23
GPC1-202ENST00000420138 PSCAO43653 123 aa13.61□□□□□ -0.23
GPC1-202ENST00000420138 LINC00476Q8WZB0 136 aa13.61□□□□□ -0.23
GPC1-202ENST00000420138 A0A087WYN8 130 aa13.6□□□□□ -0.23
GPC1-202ENST00000420138 GAGE2EQ4V326 116 aa13.6□□□□□ -0.23
GPC1-202ENST00000420138 GAGE2DQ9UEU5 116 aa13.6□□□□□ -0.23
GPC1-202ENST00000420138 DNAL4O96015 105 aa13.59□□□□□ -0.23
GPC1-202ENST00000420138 C9orf129Q5T035 196 aaKnown RBP13.59□□□□□ -0.23
GPC1-202ENST00000420138 LRCOL1A6NCL2 159 aa13.58□□□□□ -0.24
GPC1-202ENST00000420138 VPREB1P12018 145 aa13.57□□□□□ -0.24
GPC1-202ENST00000420138 Q6ZR54 194 aa13.57□□□□□ -0.24
GPC1-202ENST00000420138 CNBPP62633 177 aaKnown RBP13.55□□□□□ -0.24
GPC1-202ENST00000420138 RPL18AQ02543 176 aaKnown RBP13.55□□□□□ -0.24
GPC1-202ENST00000420138 S100A7L2Q5SY68 101 aa13.55□□□□□ -0.24
GPC1-202ENST00000420138 C21orf62-AS1Q17RA5 79 aa13.55□□□□□ -0.24
GPC1-202ENST00000420138 C22orf24Q9Y442 160 aa13.55□□□□□ -0.24
GPC1-202ENST00000420138 KMT2AQ03164 3969 aa13.54□□□□□ -0.24
GPC1-202ENST00000420138 IGLV6-57P01721 117 aa13.54□□□□□ -0.24
GPC1-202ENST00000420138 A0A1B0GX51 115 aa13.53□□□□□ -0.24
GPC1-202ENST00000420138 SCGB1A1P11684 91 aa13.53□□□□□ -0.24
GPC1-202ENST00000420138 DNAH2Q9P225 4427 aa13.52□□□□□ -0.24
GPC1-202ENST00000420138 XGP55808 180 aa13.52□□□□□ -0.25
GPC1-202ENST00000420138 C14orf177Q52M58 125 aa13.5□□□□□ -0.25
GPC1-202ENST00000420138 FAM240AA0A1B0GVK7 77 aa13.5□□□□□ -0.25
GPC1-202ENST00000420138 TRBV10-3A0A0K0K1G6 114 aa13.49□□□□□ -0.25
GPC1-202ENST00000420138 MT-ATP8P03928 68 aa13.49□□□□□ -0.25
GPC1-202ENST00000420138 SERTAD4-AS1Q5TG53 156 aa13.49□□□□□ -0.25
GPC1-202ENST00000420138 LOC107984640A0A0U1RRK4 108 aa13.48□□□□□ -0.25
GPC1-202ENST00000420138 C6orf99Q4VX62 202 aa13.48□□□□□ -0.25
GPC1-202ENST00000420138 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.48□□□□□ -0.25
GPC1-202ENST00000420138 LINC00167Q96N53 147 aa13.48□□□□□ -0.25
GPC1-202ENST00000420138 PLA2G2DQ9UNK4 145 aa13.48□□□□□ -0.25
GPC1-202ENST00000420138 M0R378 163 aa13.47□□□□□ -0.25
GPC1-202ENST00000420138 KRTAP7-1Q8IUC3 87 aa13.47□□□□□ -0.25
GPC1-202ENST00000420138 INAFM2P0DMQ5 153 aa13.46□□□□□ -0.25
GPC1-202ENST00000420138 GAGE2BQ13066 116 aa13.46□□□□□ -0.25
GPC1-202ENST00000420138 Q8N814 137 aa13.46□□□□□ -0.25
GPC1-202ENST00000420138 ORMDL1Q9P0S3 153 aa13.46□□□□□ -0.25
GPC1-202ENST00000420138 ALMS1Q8TCU4 4167 aa13.45□□□□□ -0.26
GPC1-202ENST00000420138 FAM168BA1KXE4 195 aa13.45□□□□□ -0.26
GPC1-202ENST00000420138 SNCGO76070 127 aa13.44□□□□□ -0.26
GPC1-202ENST00000420138 ACYP1P07311 99 aa13.44□□□□□ -0.26
GPC1-202ENST00000420138 C1orf134Q5TEV5 83 aa13.43□□□□□ -0.26
GPC1-202ENST00000420138 IGLV5-37A0A075B6J1 123 aa13.42□□□□□ -0.26
GPC1-202ENST00000420138 DNAH6Q9C0G6 4158 aa13.42□□□□□ -0.26
GPC1-202ENST00000420138 TRAV23DV6A0A075B6W5 121 aa13.41□□□□□ -0.26
GPC1-202ENST00000420138 A0A087WTM6 91 aa13.41□□□□□ -0.26
GPC1-202ENST00000420138 A0A096LNI7 61 aa13.41□□□□□ -0.26
GPC1-202ENST00000420138 LINC00575Q6W349 94 aa13.41□□□□□ -0.26
GPC1-202ENST00000420138 C9orf163Q8N9P6 203 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms