RNA–Protein interactions for RNA: ENST00000415051.5

UBE2D4-202, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-202ENST00000415051 NXT2Q9NPJ8 142 aaKnown RBP9.4□□□□□ -0.9
UBE2D4-202ENST00000415051 LINC00483Q53H64 154 aa9.39□□□□□ -0.91
UBE2D4-202ENST00000415051 USH2AO75445 5202 aa9.38□□□□□ -0.91
UBE2D4-202ENST00000415051 PCOTHQ58A44 107 aa9.38□□□□□ -0.91
UBE2D4-202ENST00000415051 FAM19A2Q8N3H0 131 aa9.38□□□□□ -0.91
UBE2D4-202ENST00000415051 CST9LQ9H4G1 147 aa9.38□□□□□ -0.91
UBE2D4-202ENST00000415051 ERG28Q9UKR5 140 aa9.38□□□□□ -0.91
UBE2D4-202ENST00000415051 IGLV5-39A0A0G2JS06 123 aa9.37□□□□□ -0.91
UBE2D4-202ENST00000415051 SCGB3A1Q96QR1 104 aa9.37□□□□□ -0.91
UBE2D4-202ENST00000415051 IGLV8-61A0A075B6I0 122 aa9.36□□□□□ -0.91
UBE2D4-202ENST00000415051 SMCR5Q8TEV8 140 aa9.36□□□□□ -0.91
UBE2D4-202ENST00000415051 SLC25A20O43772 301 aa9.35□□□□□ -0.91
UBE2D4-202ENST00000415051 G0S2P27469 103 aa9.35□□□□□ -0.91
UBE2D4-202ENST00000415051 MOBPQ13875 183 aa9.35□□□□□ -0.91
UBE2D4-202ENST00000415051 MRPL18Q9H0U6 180 aaKnown RBP9.35□□□□□ -0.91
UBE2D4-202ENST00000415051 KRTAP4-16G5E9R7 235 aaPredicted RBP9.34□□□□□ -0.91
UBE2D4-202ENST00000415051 COX17Q14061 63 aa9.34□□□□□ -0.91
UBE2D4-202ENST00000415051 SPRR1AP35321 89 aa9.33□□□□□ -0.92
UBE2D4-202ENST00000415051 ZNF625Q96I27 306 aaPredicted RBP9.33□□□□□ -0.92
UBE2D4-202ENST00000415051 hCG_2014768A0A024R1R8 64 aa9.31□□□□□ -0.92
UBE2D4-202ENST00000415051 IGLV9-49A0A0B4J1Y8 123 aa9.31□□□□□ -0.92
UBE2D4-202ENST00000415051 PEA15Q15121 130 aa9.31□□□□□ -0.92
UBE2D4-202ENST00000415051 SSBP3-AS1Q7Z2R9 100 aa9.31□□□□□ -0.92
UBE2D4-202ENST00000415051 AKAP14Q86UN6 197 aa9.31□□□□□ -0.92
UBE2D4-202ENST00000415051 H3BRM9 83 aa9.3□□□□□ -0.92
UBE2D4-202ENST00000415051 PMVKQ15126 192 aa9.3□□□□□ -0.92
UBE2D4-202ENST00000415051 GAGE2AQ6NT46 116 aa9.3□□□□□ -0.92
UBE2D4-202ENST00000415051 M0R2T5 61 aa9.29□□□□□ -0.92
UBE2D4-202ENST00000415051 PRYO14603 147 aa9.29□□□□□ -0.92
UBE2D4-202ENST00000415051 LINC01546A6NGU7 62 aa9.28□□□□□ -0.92
UBE2D4-202ENST00000415051 ERC2-IT1O76042 136 aa9.28□□□□□ -0.92
UBE2D4-202ENST00000415051 IGLC3P0DOY3 106 aa9.28□□□□□ -0.92
UBE2D4-202ENST00000415051 KCNQ1DNQ9H478 68 aa9.28□□□□□ -0.92
UBE2D4-202ENST00000415051 ZNF22P17026 224 aaPredicted RBP9.27□□□□□ -0.93
UBE2D4-202ENST00000415051 KIAA1644Q3SXP7 199 aa9.27□□□□□ -0.93
UBE2D4-202ENST00000415051 ETDCA0A1B0GVM5 59 aa9.23□□□□□ -0.93
UBE2D4-202ENST00000415051 C9orf92A6NGG3 77 aa9.23□□□□□ -0.93
UBE2D4-202ENST00000415051 FCGBPQ9Y6R7 5405 aaPredicted RBP9.22□□□□□ -0.93
UBE2D4-202ENST00000415051 LINC01549A6NIU2 74 aa9.22□□□□□ -0.93
UBE2D4-202ENST00000415051 B5MCH6 92 aa9.22□□□□□ -0.93
UBE2D4-202ENST00000415051 NCR3O14931 201 aa9.22□□□□□ -0.93
UBE2D4-202ENST00000415051 A0A0U1RRA0 63 aa9.21□□□□□ -0.94
UBE2D4-202ENST00000415051 LINC00158P58513 81 aa9.21□□□□□ -0.94
UBE2D4-202ENST00000415051 Q9BRP9 147 aa9.21□□□□□ -0.94
UBE2D4-202ENST00000415051 ANAPC16Q96DE5 110 aa9.2□□□□□ -0.94
UBE2D4-202ENST00000415051 TRBV10-3A0A0K0K1G6 114 aa9.19□□□□□ -0.94
UBE2D4-202ENST00000415051 MT-ND4LP03901 98 aa9.18□□□□□ -0.94
UBE2D4-202ENST00000415051 SFTA2Q6UW10 78 aa9.18□□□□□ -0.94
UBE2D4-202ENST00000415051 BOD1L2Q8IYS8 172 aa9.18□□□□□ -0.94
UBE2D4-202ENST00000415051 A0A096LNJ9 63 aa9.17□□□□□ -0.94
UBE2D4-202ENST00000415051 C11orf86A6NJI1 115 aa9.17□□□□□ -0.94
UBE2D4-202ENST00000415051 SMIM13P0DJ93 91 aa9.15□□□□□ -0.94
UBE2D4-202ENST00000415051 C9orf153Q5TBE3 101 aa9.15□□□□□ -0.94
UBE2D4-202ENST00000415051 COX6B2Q6YFQ2 88 aa9.15□□□□□ -0.94
UBE2D4-202ENST00000415051 NDUFA6P56556 154 aa9.14□□□□□ -0.95
UBE2D4-202ENST00000415051 TRAV9-1A0A075B6T8 112 aa9.12□□□□□ -0.95
UBE2D4-202ENST00000415051 Q6ZRX8 168 aa9.12□□□□□ -0.95
UBE2D4-202ENST00000415051 MIR7-3HGQ8N6C7 128 aa9.12□□□□□ -0.95
UBE2D4-202ENST00000415051 MACF1Q9UPN3 7388 aaKnown RBP9.12□□□□□ -0.95
UBE2D4-202ENST00000415051 TMEM170BQ5T4T1 132 aa9.11□□□□□ -0.95
UBE2D4-202ENST00000415051 FA2HQ7L5A8 372 aa9.11□□□□□ -0.95
UBE2D4-202ENST00000415051 IGLV6-57P01721 117 aa9.1□□□□□ -0.95
UBE2D4-202ENST00000415051 SYNE2Q8WXH0 6885 aaKnown RBP9.09□□□□□ -0.95
UBE2D4-202ENST00000415051 ST20-AS1Q8NBB2 130 aa9.09□□□□□ -0.95
UBE2D4-202ENST00000415051 URB1-AS1Q96HZ7 61 aa9.09□□□□□ -0.95
UBE2D4-202ENST00000415051 SMCO4Q9NRQ5 59 aa9.08□□□□□ -0.96
UBE2D4-202ENST00000415051 HRCT1Q6UXD1 115 aa9.07□□□□□ -0.96
UBE2D4-202ENST00000415051 LIMD2Q9BT23 127 aa9.07□□□□□ -0.96
UBE2D4-202ENST00000415051 TMEM223A0PJW6 202 aa9.06□□□□□ -0.96
UBE2D4-202ENST00000415051 DDTP30046 118 aa9.06□□□□□ -0.96
UBE2D4-202ENST00000415051 RPL37P61927 97 aaKnown RBP9.06□□□□□ -0.96
UBE2D4-202ENST00000415051 BAGE3Q86Y29 109 aa9.06□□□□□ -0.96
UBE2D4-202ENST00000415051 ATP6V1G1O75348 118 aa9.05□□□□□ -0.96
UBE2D4-202ENST00000415051 KRTAP9-8Q9BYQ0 159 aa9.05□□□□□ -0.96
UBE2D4-202ENST00000415051 PMCHL1Q16048 86 aa9.04□□□□□ -0.96
UBE2D4-202ENST00000415051 MEIG1Q5JSS6 88 aa9.04□□□□□ -0.96
UBE2D4-202ENST00000415051 S100A12P80511 92 aa9.03□□□□□ -0.96
UBE2D4-202ENST00000415051 LOC107984156A0A0G2JMH3 177 aa9.02□□□□□ -0.97
UBE2D4-202ENST00000415051 ARL17AQ8IVW1 177 aa9.02□□□□□ -0.97
UBE2D4-202ENST00000415051 TRBV10-2A0A0K0K1G8 114 aa9.01□□□□□ -0.97
UBE2D4-202ENST00000415051 HBDP02042 147 aa9.01□□□□□ -0.97
UBE2D4-202ENST00000415051 CHTOPQ9Y3Y2 248 aaKnown RBP9□□□□□ -0.97
UBE2D4-202ENST00000415051 SPRR1BP22528 89 aa8.99□□□□□ -0.97
UBE2D4-202ENST00000415051 HERV-K104P63124 156 aa8.99□□□□□ -0.97
UBE2D4-202ENST00000415051 CFC1P0CG37 223 aa8.98□□□□□ -0.97
UBE2D4-202ENST00000415051 LINC00614P0C842 121 aa8.97□□□□□ -0.97
UBE2D4-202ENST00000415051 FABP9Q0Z7S8 132 aa8.97□□□□□ -0.97
UBE2D4-202ENST00000415051 JOSD1Q15040 202 aaPredicted RBP8.97□□□□□ -0.97
UBE2D4-202ENST00000415051 KRTAP19-1Q8IUB9 90 aa8.97□□□□□ -0.97
UBE2D4-202ENST00000415051 C5orf52A6NGY3 159 aa8.96□□□□□ -0.98
UBE2D4-202ENST00000415051 C18orf32Q8TCD1 76 aa8.96□□□□□ -0.98
UBE2D4-202ENST00000415051 SPANXB1Q9NS25 103 aaPredicted RBP8.96□□□□□ -0.98
UBE2D4-202ENST00000415051 TRAV23DV6A0A075B6W5 121 aa8.95□□□□□ -0.98
UBE2D4-202ENST00000415051 C1orf195Q5TG92 126 aa8.95□□□□□ -0.98
UBE2D4-202ENST00000415051 LINC00587B1AMM8 73 aa8.94□□□□□ -0.98
UBE2D4-202ENST00000415051 H7C2G1 150 aa8.93□□□□□ -0.98
UBE2D4-202ENST00000415051 ZNF73O43830 326 aaPredicted RBP8.93□□□□□ -0.98
UBE2D4-202ENST00000415051 CD164Q04900 197 aa8.93□□□□□ -0.98
UBE2D4-202ENST00000415051 MAP1LC3CQ9BXW4 147 aa8.93□□□□□ -0.98
UBE2D4-202ENST00000415051 TSPEAR-AS2P59090 65 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 207.9 ms