RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 KRTAP13-1Q8IUC0 172 aa15.66■□□□□ 0.1
VEGFA-207ENST00000413642 SMIM13P0DJ93 91 aa15.65■□□□□ 0.1
VEGFA-207ENST00000413642 RPL24P83731 157 aaKnown RBP15.65■□□□□ 0.1
VEGFA-207ENST00000413642 TMEM238C9JI98 176 aa15.64■□□□□ 0.09
VEGFA-207ENST00000413642 UBE2AP49459 152 aa15.64■□□□□ 0.09
VEGFA-207ENST00000413642 LRP2P98164 4655 aa15.63■□□□□ 0.09
VEGFA-207ENST00000413642 PMCHL2Q9BQD1 86 aa15.62■□□□□ 0.09
VEGFA-207ENST00000413642 ANAPC11Q9NYG5 84 aa15.62■□□□□ 0.09
VEGFA-207ENST00000413642 RPL13AP40429 203 aaKnown RBP15.61■□□□□ 0.09
VEGFA-207ENST00000413642 TSPEAR-AS2P59090 65 aa15.61■□□□□ 0.09
VEGFA-207ENST00000413642 TMEM126AQ9H061 195 aa15.61■□□□□ 0.09
VEGFA-207ENST00000413642 A0A087X002 238 aa15.6■□□□□ 0.09
VEGFA-207ENST00000413642 PRLHP81277 87 aa15.6■□□□□ 0.09
VEGFA-207ENST00000413642 MEIG1Q5JSS6 88 aa15.6■□□□□ 0.09
VEGFA-207ENST00000413642 NDUFA12Q9UI09 145 aa15.6■□□□□ 0.09
VEGFA-207ENST00000413642 HSPB8Q9UJY1 196 aa15.59■□□□□ 0.09
VEGFA-207ENST00000413642 M0R378 163 aa15.58■□□□□ 0.08
VEGFA-207ENST00000413642 FAM19A1Q7Z5A9 133 aa15.58■□□□□ 0.08
VEGFA-207ENST00000413642 MIR7-3HGQ8N6C7 128 aa15.57■□□□□ 0.08
VEGFA-207ENST00000413642 ATP6V1G1O75348 118 aa15.56■□□□□ 0.08
VEGFA-207ENST00000413642 HERV-K104P63124 156 aa15.56■□□□□ 0.08
VEGFA-207ENST00000413642 MYMXA0A1B0GTQ4 84 aa15.54■□□□□ 0.08
VEGFA-207ENST00000413642 LEPROTO15243 131 aa15.54■□□□□ 0.08
VEGFA-207ENST00000413642 DPM2O94777 84 aa15.54■□□□□ 0.08
VEGFA-207ENST00000413642 PLNP26678 52 aa15.54■□□□□ 0.08
VEGFA-207ENST00000413642 BOD1L2Q8IYS8 172 aa15.54■□□□□ 0.08
VEGFA-207ENST00000413642 NCR3O14931 201 aa15.51■□□□□ 0.07
VEGFA-207ENST00000413642 CRYGAP11844 174 aa15.51■□□□□ 0.07
VEGFA-207ENST00000413642 PLEKHB2Q96CS7 222 aa15.51■□□□□ 0.07
VEGFA-207ENST00000413642 HIST1H2BKO60814 126 aa15.5■□□□□ 0.07
VEGFA-207ENST00000413642 IGKCP01834 107 aa15.5■□□□□ 0.07
VEGFA-207ENST00000413642 HIST1H2BJP06899 126 aa15.5■□□□□ 0.07
VEGFA-207ENST00000413642 HIST1H2BOP23527 126 aa15.5■□□□□ 0.07
VEGFA-207ENST00000413642 HIST1H2BBP33778 126 aa15.5■□□□□ 0.07
VEGFA-207ENST00000413642 HIST1H2BDP58876 126 aa15.5■□□□□ 0.07
VEGFA-207ENST00000413642 HIST1H2BCP62807 126 aa15.5■□□□□ 0.07
VEGFA-207ENST00000413642 HIST2H2BEQ16778 126 aa15.5■□□□□ 0.07
VEGFA-207ENST00000413642 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.5■□□□□ 0.07
VEGFA-207ENST00000413642 HIST1H2BHQ93079 126 aa15.5■□□□□ 0.07
VEGFA-207ENST00000413642 HIST1H2BNQ99877 126 aa15.5■□□□□ 0.07
VEGFA-207ENST00000413642 HIST1H2BMQ99879 126 aa15.5■□□□□ 0.07
VEGFA-207ENST00000413642 J3QQQ9 107 aa15.49■□□□□ 0.07
VEGFA-207ENST00000413642 DAND5Q8N907 189 aa15.49■□□□□ 0.07
VEGFA-207ENST00000413642 TSPAN13O95857 204 aa15.48■□□□□ 0.07
VEGFA-207ENST00000413642 KRTAP13-2Q52LG2 175 aa15.48■□□□□ 0.07
VEGFA-207ENST00000413642 TYMSOSQ8TAI1 123 aa15.48■□□□□ 0.07
VEGFA-207ENST00000413642 MAP1LC3CQ9BXW4 147 aa15.48■□□□□ 0.07
VEGFA-207ENST00000413642 LINC00587B1AMM8 73 aa15.46■□□□□ 0.07
VEGFA-207ENST00000413642 HERVK_113P61574 105 aa15.46■□□□□ 0.07
VEGFA-207ENST00000413642 LGALS3P17931 250 aaKnown RBP15.43■□□□□ 0.06
VEGFA-207ENST00000413642 HIGD2AQ9BW72 106 aa15.43■□□□□ 0.06
VEGFA-207ENST00000413642 FAM229BQ4G0N7 80 aa15.41■□□□□ 0.06
VEGFA-207ENST00000413642 LPAP08519 4548 aa15.4■□□□□ 0.06
VEGFA-207ENST00000413642 TRBV10-3A0A0K0K1G6 114 aa15.4■□□□□ 0.06
VEGFA-207ENST00000413642 SYS1-DBNDD2H3BUS1 97 aa15.4■□□□□ 0.06
VEGFA-207ENST00000413642 PRR4Q16378 134 aa15.4■□□□□ 0.06
VEGFA-207ENST00000413642 PRYO14603 147 aa15.39■□□□□ 0.05
VEGFA-207ENST00000413642 NMUP48645 174 aa15.39■□□□□ 0.05
VEGFA-207ENST00000413642 IGKV2D-26A0A0A0MRZ7 120 aa15.38■□□□□ 0.05
VEGFA-207ENST00000413642 KCNQ1DNQ9H478 68 aa15.38■□□□□ 0.05
VEGFA-207ENST00000413642 LOC107984156A0A0G2JMH3 177 aa15.37■□□□□ 0.05
VEGFA-207ENST00000413642 ARL17AQ8IVW1 177 aa15.37■□□□□ 0.05
VEGFA-207ENST00000413642 RNF213Q63HN8 5207 aa15.36■□□□□ 0.05
VEGFA-207ENST00000413642 SPRR1AP35321 89 aa15.36■□□□□ 0.05
VEGFA-207ENST00000413642 E9PLD3 99 aa15.35■□□□□ 0.05
VEGFA-207ENST00000413642 A0A0J9YXY3 114 aa15.34■□□□□ 0.05
VEGFA-207ENST00000413642 EIF4EBP3O60516 100 aaPredicted RBP15.34■□□□□ 0.05
VEGFA-207ENST00000413642 ADAMTSL4-AS1Q5T5F5 129 aa15.34■□□□□ 0.05
VEGFA-207ENST00000413642 KRTAP4-16G5E9R7 235 aaPredicted RBP15.33■□□□□ 0.04
VEGFA-207ENST00000413642 C3orf22Q8N5N4 141 aa15.33■□□□□ 0.04
VEGFA-207ENST00000413642 LINC00337Q8N6G1 96 aa15.33■□□□□ 0.04
VEGFA-207ENST00000413642 NPC2P61916 151 aa15.32■□□□□ 0.04
VEGFA-207ENST00000413642 LINC01545Q5VT33 79 aa15.32■□□□□ 0.04
VEGFA-207ENST00000413642 SOSTDC1Q6X4U4 206 aa15.32■□□□□ 0.04
VEGFA-207ENST00000413642 SPRR4Q96PI1 79 aa15.32■□□□□ 0.04
VEGFA-207ENST00000413642 ETDCA0A1B0GVM5 59 aa15.3■□□□□ 0.04
VEGFA-207ENST00000413642 PET117Q6UWS5 81 aa15.3■□□□□ 0.04
VEGFA-207ENST00000413642 LINC00304Q8N9R0 145 aa15.3■□□□□ 0.04
VEGFA-207ENST00000413642 SMCR5Q8TEV8 140 aa15.3■□□□□ 0.04
VEGFA-207ENST00000413642 DDTP30046 118 aa15.29■□□□□ 0.04
VEGFA-207ENST00000413642 MIEN1Q9BRT3 115 aa15.29■□□□□ 0.04
VEGFA-207ENST00000413642 TRBV10-2A0A0K0K1G8 114 aa15.28■□□□□ 0.04
VEGFA-207ENST00000413642 C3orf79P0CE67 100 aa15.28■□□□□ 0.04
VEGFA-207ENST00000413642 COA6Q5JTJ3 125 aaKnown RBP15.27■□□□□ 0.04
VEGFA-207ENST00000413642 SPANXB1Q9NS25 103 aaPredicted RBP15.27■□□□□ 0.04
VEGFA-207ENST00000413642 B5MCH6 92 aa15.25■□□□□ 0.03
VEGFA-207ENST00000413642 TTTY13Q9BZ97 58 aa15.25■□□□□ 0.03
VEGFA-207ENST00000413642 PPDPFQ9H3Y8 114 aa15.25■□□□□ 0.03
VEGFA-207ENST00000413642 NDUFC2O95298 119 aa15.24■□□□□ 0.03
VEGFA-207ENST00000413642 RETNLBQ9BQ08 111 aa15.24■□□□□ 0.03
VEGFA-207ENST00000413642 KRTDAPP60985 99 aa15.23■□□□□ 0.03
VEGFA-207ENST00000413642 LITAFQ99732 161 aa15.23■□□□□ 0.03
VEGFA-207ENST00000413642 ERC2-IT1O76042 136 aa15.22■□□□□ 0.03
VEGFA-207ENST00000413642 IGLV6-57P01721 117 aa15.22■□□□□ 0.03
VEGFA-207ENST00000413642 S100A12P80511 92 aa15.22■□□□□ 0.03
VEGFA-207ENST00000413642 ZNF706Q9Y5V0 76 aaPredicted RBP15.22■□□□□ 0.03
VEGFA-207ENST00000413642 S100A7L2Q5SY68 101 aa15.21■□□□□ 0.03
VEGFA-207ENST00000413642 ZNF815PA8K554 130 aa15.18■□□□□ 0.02
VEGFA-207ENST00000413642 LINC00308Q8TCZ7 52 aa15.18■□□□□ 0.02
VEGFA-207ENST00000413642 Q9BRP9 147 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms