RNA–Protein interactions for RNA: ENST00000412923.6

PCDH18-202, Transcript of protocadherin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH18, Length 5,102 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-202ENST00000412923 DEFB113Q30KQ7 82 aa4.31□□□□□ -1.72
PCDH18-202ENST00000412923 MRPL34Q9BQ48 92 aaKnown RBP4.31□□□□□ -1.72
PCDH18-202ENST00000412923 ZFHX2Q9C0A1 2572 aaPredicted RBP4.31□□□□□ -1.72
PCDH18-202ENST00000412923 K7EQZ3 153 aa4.31□□□□□ -1.72
PCDH18-202ENST00000412923 C8orf17Q9NRJ1 99 aa4.31□□□□□ -1.72
PCDH18-202ENST00000412923 KIAA1671Q9BY89 1806 aa4.31□□□□□ -1.72
PCDH18-202ENST00000412923 ARFGEF3Q5TH69 2177 aa4.31□□□□□ -1.72
PCDH18-202ENST00000412923 LINC00528Q8N1L1 170 aa4.31□□□□□ -1.72
PCDH18-202ENST00000412923 IGKV2D-30A0A075B6S6 120 aa4.3□□□□□ -1.72
PCDH18-202ENST00000412923 IGKV2-30P06310 120 aa4.3□□□□□ -1.72
PCDH18-202ENST00000412923 FREM1Q5H8C1 2179 aa4.3□□□□□ -1.72
PCDH18-202ENST00000412923 FER1L5A0AVI2 2057 aa4.3□□□□□ -1.72
PCDH18-202ENST00000412923 IGKV2-24A0A0C4DH68 120 aa4.3□□□□□ -1.72
PCDH18-202ENST00000412923 PROK1P58294 105 aa4.3□□□□□ -1.72
PCDH18-202ENST00000412923 C1orf229Q6ZS94 237 aaPredicted RBP4.3□□□□□ -1.72
PCDH18-202ENST00000412923 THSD7BQ9C0I4 1608 aa4.3□□□□□ -1.72
PCDH18-202ENST00000412923 FRYQ5TBA9 3013 aa4.3□□□□□ -1.72
PCDH18-202ENST00000412923 DEFB136Q30KP8 78 aa4.3□□□□□ -1.72
PCDH18-202ENST00000412923 PLXNA2O75051 1894 aa4.3□□□□□ -1.72
PCDH18-202ENST00000412923 FRYLO94915 3013 aa4.29□□□□□ -1.72
PCDH18-202ENST00000412923 TCF20Q9UGU0 1960 aaKnown RBP4.29□□□□□ -1.72
PCDH18-202ENST00000412923 NUP210Q8TEM1 1887 aaPredicted RBP4.29□□□□□ -1.72
PCDH18-202ENST00000412923 C9orf129Q5T035 196 aaKnown RBP4.29□□□□□ -1.72
PCDH18-202ENST00000412923 NOTCH2NLQ7Z3S9 236 aa4.29□□□□□ -1.72
PCDH18-202ENST00000412923 ROS1P08922 2347 aa4.29□□□□□ -1.72
PCDH18-202ENST00000412923 J3QKU1 62 aa4.28□□□□□ -1.72
PCDH18-202ENST00000412923 PRR14LQ5THK1 2151 aa4.28□□□□□ -1.72
PCDH18-202ENST00000412923 ARHGAP21Q5T5U3 1957 aa4.28□□□□□ -1.72
PCDH18-202ENST00000412923 FAM104AQ969W3 186 aa4.28□□□□□ -1.72
PCDH18-202ENST00000412923 DEFB1P60022 68 aa4.28□□□□□ -1.72
PCDH18-202ENST00000412923 CADP27708 2225 aa4.28□□□□□ -1.72
PCDH18-202ENST00000412923 FREM2Q5SZK8 3169 aa4.27□□□□□ -1.73
PCDH18-202ENST00000412923 LINC00483Q53H64 154 aa4.27□□□□□ -1.73
PCDH18-202ENST00000412923 VWA8A3KMH1 1905 aa4.27□□□□□ -1.73
PCDH18-202ENST00000412923 F8W735 103 aaPredicted RBP4.27□□□□□ -1.73
PCDH18-202ENST00000412923 SLURP1P55000 103 aa4.27□□□□□ -1.73
PCDH18-202ENST00000412923 ODF3BA8MYP8 253 aa4.27□□□□□ -1.73
PCDH18-202ENST00000412923 C9orf163Q8N9P6 203 aa4.26□□□□□ -1.73
PCDH18-202ENST00000412923 PLA2G2CQ5R387 149 aa4.26□□□□□ -1.73
PCDH18-202ENST00000412923 ATG2AQ2TAZ0 1938 aa4.26□□□□□ -1.73
PCDH18-202ENST00000412923 TNP2Q05952 138 aa4.26□□□□□ -1.73
PCDH18-202ENST00000412923 NCOA6Q14686 2063 aaPredicted RBP4.26□□□□□ -1.73
PCDH18-202ENST00000412923 CYSTM1Q9H1C7 97 aa4.26□□□□□ -1.73
PCDH18-202ENST00000412923 COL6A3P12111 3177 aa4.25□□□□□ -1.73
PCDH18-202ENST00000412923 APLNQ9ULZ1 77 aa4.25□□□□□ -1.73
PCDH18-202ENST00000412923 NOTCH2Q04721 2471 aa4.25□□□□□ -1.73
PCDH18-202ENST00000412923 FAM208BQ5VWN6 2430 aa4.25□□□□□ -1.73
PCDH18-202ENST00000412923 J3QL48 77 aa4.25□□□□□ -1.73
PCDH18-202ENST00000412923 IGLV6-57P01721 117 aa4.25□□□□□ -1.73
PCDH18-202ENST00000412923 Q6ZRX8 168 aa4.25□□□□□ -1.73
PCDH18-202ENST00000412923 Q8NAQ8 132 aa4.25□□□□□ -1.73
PCDH18-202ENST00000412923 INAFM1C9JVW0 142 aa4.24□□□□□ -1.73
PCDH18-202ENST00000412923 CHD9Q3L8U1 2897 aa4.24□□□□□ -1.73
PCDH18-202ENST00000412923 CUL9Q8IWT3 2517 aa4.24□□□□□ -1.73
PCDH18-202ENST00000412923 COL4A6Q14031 1691 aa4.24□□□□□ -1.73
PCDH18-202ENST00000412923 IGFL3Q6UXB1 125 aa4.24□□□□□ -1.73
PCDH18-202ENST00000412923 ST20-AS1Q8NBB2 130 aa4.24□□□□□ -1.73
PCDH18-202ENST00000412923 NBEAQ8NFP9 2946 aa4.24□□□□□ -1.73
PCDH18-202ENST00000412923 A8MTW9 85 aa4.24□□□□□ -1.73
PCDH18-202ENST00000412923 PLA2G2DQ9UNK4 145 aa4.24□□□□□ -1.73
PCDH18-202ENST00000412923 ZNF407Q9C0G0 2248 aa4.24□□□□□ -1.73
PCDH18-202ENST00000412923 PRRC2AP48634 2157 aaKnown RBP4.23□□□□□ -1.73
PCDH18-202ENST00000412923 PTPRQQ9UMZ3 2332 aa4.23□□□□□ -1.73
PCDH18-202ENST00000412923 EML5Q05BV3 1969 aa4.23□□□□□ -1.73
PCDH18-202ENST00000412923 GVQW2A0A096LPI5 108 aaPredicted RBP4.23□□□□□ -1.73
PCDH18-202ENST00000412923 NUP210LQ5VU65 1888 aa4.23□□□□□ -1.73
PCDH18-202ENST00000412923 CREBBPQ92793 2442 aa4.23□□□□□ -1.73
PCDH18-202ENST00000412923 PKDREJQ9NTG1 2253 aa4.23□□□□□ -1.73
PCDH18-202ENST00000412923 WDFY4Q6ZS81 3184 aa4.23□□□□□ -1.73
PCDH18-202ENST00000412923 USF3Q68DE3 2245 aa4.23□□□□□ -1.73
PCDH18-202ENST00000412923 LINC00315P59091 139 aa4.23□□□□□ -1.73
PCDH18-202ENST00000412923 PLXNB3Q9ULL4 1909 aa4.23□□□□□ -1.73
PCDH18-202ENST00000412923 PRRC2CQ9Y520 2896 aaKnown RBP4.22□□□□□ -1.73
PCDH18-202ENST00000412923 SPINK7P58062 85 aa4.22□□□□□ -1.73
PCDH18-202ENST00000412923 Q6YL49 198 aa4.22□□□□□ -1.73
PCDH18-202ENST00000412923 ROMO1P60602 79 aa4.22□□□□□ -1.73
PCDH18-202ENST00000412923 KRTAP25-1Q3LHN0 102 aa4.22□□□□□ -1.73
PCDH18-202ENST00000412923 C18orf65Q6ZTR6 163 aa4.22□□□□□ -1.73
PCDH18-202ENST00000412923 ASPMQ8IZT6 3477 aa4.22□□□□□ -1.73
PCDH18-202ENST00000412923 ABCA1O95477 2261 aa4.21□□□□□ -1.74
PCDH18-202ENST00000412923 PCNX1Q96RV3 2341 aa4.21□□□□□ -1.74
PCDH18-202ENST00000412923 ACACBO00763 2458 aa4.21□□□□□ -1.74
PCDH18-202ENST00000412923 COL4A4P53420 1690 aaPredicted RBP4.21□□□□□ -1.74
PCDH18-202ENST00000412923 U3KQA8 63 aa4.21□□□□□ -1.74
PCDH18-202ENST00000412923 RNF223E7ERA6 249 aa4.2□□□□□ -1.74
PCDH18-202ENST00000412923 A0A1B0GU33 70 aa4.2□□□□□ -1.74
PCDH18-202ENST00000412923 PIEZO1Q92508 2521 aa4.2□□□□□ -1.74
PCDH18-202ENST00000412923 PCNX2A6NKB5 2137 aa4.2□□□□□ -1.74
PCDH18-202ENST00000412923 LOC400499M0QZD8 3231 aa4.2□□□□□ -1.74
PCDH18-202ENST00000412923 CACNA1AO00555 2505 aa4.2□□□□□ -1.74
PCDH18-202ENST00000412923 DNAH10OSP0CZ25 163 aa4.19□□□□□ -1.74
PCDH18-202ENST00000412923 SORL1Q92673 2214 aa4.19□□□□□ -1.74
PCDH18-202ENST00000412923 KIAA1549LQ6ZVL6 1849 aa4.19□□□□□ -1.74
PCDH18-202ENST00000412923 DMDP11532 3685 aa4.19□□□□□ -1.74
PCDH18-202ENST00000412923 CIRBP-AS1Q8TBR5 109 aa4.19□□□□□ -1.74
PCDH18-202ENST00000412923 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.19□□□□□ -1.74
PCDH18-202ENST00000412923 COL4A3Q01955 1670 aa4.19□□□□□ -1.74
PCDH18-202ENST00000412923 PLCE1Q9P212 2302 aa4.19□□□□□ -1.74
PCDH18-202ENST00000412923 DCHS1Q96JQ0 3298 aa4.19□□□□□ -1.74
PCDH18-202ENST00000412923 A0A1B0GVX0 72 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms