RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 ZNF561-AS1K7EIQ3 104 aa11.8□□□□□ -0.52
CXXC1-202ENST00000412036 CXCL5P42830 114 aa11.8□□□□□ -0.52
CXXC1-202ENST00000412036 CAMK2N2Q96S95 79 aa11.79□□□□□ -0.52
CXXC1-202ENST00000412036 FAT2Q9NYQ8 4349 aa11.78□□□□□ -0.52
CXXC1-202ENST00000412036 KMT2CQ8NEZ4 4911 aaKnown RBP11.78□□□□□ -0.52
CXXC1-202ENST00000412036 H7C2G1 150 aa11.77□□□□□ -0.53
CXXC1-202ENST00000412036 IGKV2-28A0A075B6P5 120 aa11.76□□□□□ -0.53
CXXC1-202ENST00000412036 IGKV2D-28P01615 120 aa11.76□□□□□ -0.53
CXXC1-202ENST00000412036 IFITM1P13164 125 aa11.76□□□□□ -0.53
CXXC1-202ENST00000412036 PRR3P79522 188 aaKnown RBP11.76□□□□□ -0.53
CXXC1-202ENST00000412036 A0A0B4J2C4 111 aa11.76□□□□□ -0.53
CXXC1-202ENST00000412036 SND1-IT1Q9HBX3 110 aa11.76□□□□□ -0.53
CXXC1-202ENST00000412036 SCGB1C2P0DMR2 95 aa11.75□□□□□ -0.53
CXXC1-202ENST00000412036 Q6ZR54 194 aa11.75□□□□□ -0.53
CXXC1-202ENST00000412036 J3QR89 54 aa11.75□□□□□ -0.53
CXXC1-202ENST00000412036 LY6G6CO95867 125 aa11.75□□□□□ -0.53
CXXC1-202ENST00000412036 RMI2Q96E14 147 aa11.75□□□□□ -0.53
CXXC1-202ENST00000412036 C2orf48Q96LS8 159 aa11.75□□□□□ -0.53
CXXC1-202ENST00000412036 TRBV20-1A0A075B6N2 111 aa11.74□□□□□ -0.53
CXXC1-202ENST00000412036 DNAH5Q8TE73 4624 aa11.74□□□□□ -0.53
CXXC1-202ENST00000412036 LRCOL1A6NCL2 159 aa11.74□□□□□ -0.53
CXXC1-202ENST00000412036 LYRM7Q5U5X0 104 aa11.74□□□□□ -0.53
CXXC1-202ENST00000412036 LINC00476Q8WZB0 136 aa11.74□□□□□ -0.53
CXXC1-202ENST00000412036 CARD19Q96LW7 228 aa11.74□□□□□ -0.53
CXXC1-202ENST00000412036 XAGE1AQ9HD64 81 aa11.74□□□□□ -0.53
CXXC1-202ENST00000412036 SYCNQ0VAF6 134 aa11.72□□□□□ -0.53
CXXC1-202ENST00000412036 COX17Q14061 63 aa11.72□□□□□ -0.53
CXXC1-202ENST00000412036 LINC00337Q8N6G1 96 aa11.72□□□□□ -0.53
CXXC1-202ENST00000412036 Q6ZRP5 223 aa11.72□□□□□ -0.53
CXXC1-202ENST00000412036 SIGMAR1Q99720 223 aa11.72□□□□□ -0.53
CXXC1-202ENST00000412036 TTC32Q5I0X7 151 aa11.71□□□□□ -0.53
CXXC1-202ENST00000412036 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.71□□□□□ -0.54
CXXC1-202ENST00000412036 PSCAO43653 123 aa11.71□□□□□ -0.54
CXXC1-202ENST00000412036 TRBV30A0A0K0K1B3 111 aa11.7□□□□□ -0.54
CXXC1-202ENST00000412036 RYR2Q92736 4967 aa11.7□□□□□ -0.54
CXXC1-202ENST00000412036 FUSP35637 526 aaKnown RBP eCLIP11.7□□□□□ -0.54
CXXC1-202ENST00000412036 TEN1Q86WV5 123 aa11.69□□□□□ -0.54
CXXC1-202ENST00000412036 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.68□□□□□ -0.54
CXXC1-202ENST00000412036 Q1RN00 199 aa11.68□□□□□ -0.54
CXXC1-202ENST00000412036 GAGE2EQ4V326 116 aa11.67□□□□□ -0.54
CXXC1-202ENST00000412036 GAGE2DQ9UEU5 116 aa11.67□□□□□ -0.54
CXXC1-202ENST00000412036 PKD1P98161 4303 aa11.67□□□□□ -0.54
CXXC1-202ENST00000412036 C9JAW5 83 aa11.67□□□□□ -0.54
CXXC1-202ENST00000412036 TRIAP1O43715 76 aa11.67□□□□□ -0.54
CXXC1-202ENST00000412036 RPL13AP40429 203 aaKnown RBP11.67□□□□□ -0.54
CXXC1-202ENST00000412036 ANKRD29Q8N6D5 301 aa11.67□□□□□ -0.54
CXXC1-202ENST00000412036 CDIP1Q9H305 208 aa11.67□□□□□ -0.54
CXXC1-202ENST00000412036 PPDPFQ9H3Y8 114 aa11.67□□□□□ -0.54
CXXC1-202ENST00000412036 C3orf84H3BNL1 204 aa11.66□□□□□ -0.54
CXXC1-202ENST00000412036 C9orf129Q5T035 196 aaKnown RBP11.66□□□□□ -0.54
CXXC1-202ENST00000412036 NDUFC2-KCTD14E9PQ53 114 aa11.66□□□□□ -0.54
CXXC1-202ENST00000412036 SLC25A20O43772 301 aa11.66□□□□□ -0.54
CXXC1-202ENST00000412036 LINC01620Q4KN68 170 aa11.66□□□□□ -0.54
CXXC1-202ENST00000412036 PPDPFLQ8WWR9 84 aa11.66□□□□□ -0.54
CXXC1-202ENST00000412036 NCR3O14931 201 aa11.63□□□□□ -0.55
CXXC1-202ENST00000412036 DNAH8Q96JB1 4490 aa11.63□□□□□ -0.55
CXXC1-202ENST00000412036 KRTAP7-1Q8IUC3 87 aa11.62□□□□□ -0.55
CXXC1-202ENST00000412036 FAM168BA1KXE4 195 aa11.62□□□□□ -0.55
CXXC1-202ENST00000412036 RPL18AQ02543 176 aaKnown RBP11.61□□□□□ -0.55
CXXC1-202ENST00000412036 ATXN8Q156A1 80 aa11.61□□□□□ -0.55
CXXC1-202ENST00000412036 F8WDY8 70 aa11.6□□□□□ -0.55
CXXC1-202ENST00000412036 COPS9Q8WXC6 57 aa11.6□□□□□ -0.55
CXXC1-202ENST00000412036 CNBPP62633 177 aaKnown RBP11.6□□□□□ -0.55
CXXC1-202ENST00000412036 SERTAD4-AS1Q5TG53 156 aa11.6□□□□□ -0.55
CXXC1-202ENST00000412036 M0QXV9 152 aa11.59□□□□□ -0.55
CXXC1-202ENST00000412036 A0A087WTM6 91 aa11.58□□□□□ -0.55
CXXC1-202ENST00000412036 TLX1NBP0CAT3 122 aa11.58□□□□□ -0.55
CXXC1-202ENST00000412036 SCGB1A1P11684 91 aa11.58□□□□□ -0.55
CXXC1-202ENST00000412036 VPREB1P12018 145 aa11.58□□□□□ -0.55
CXXC1-202ENST00000412036 CLEC2BQ92478 149 aa11.58□□□□□ -0.55
CXXC1-202ENST00000412036 NDUFC2O95298 119 aa11.58□□□□□ -0.56
CXXC1-202ENST00000412036 XGP55808 180 aa11.57□□□□□ -0.56
CXXC1-202ENST00000412036 Q8N814 137 aa11.57□□□□□ -0.56
CXXC1-202ENST00000412036 PKHD1P08F94 4074 aa11.57□□□□□ -0.56
CXXC1-202ENST00000412036 MT-ATP8P03928 68 aa11.57□□□□□ -0.56
CXXC1-202ENST00000412036 SMIM11BQ8TCY0 68 aa11.57□□□□□ -0.56
CXXC1-202ENST00000412036 GAGE2BQ13066 116 aa11.56□□□□□ -0.56
CXXC1-202ENST00000412036 C1orf134Q5TEV5 83 aa11.56□□□□□ -0.56
CXXC1-202ENST00000412036 RYR3Q15413 4870 aa11.56□□□□□ -0.56
CXXC1-202ENST00000412036 A0A096LNI7 61 aa11.56□□□□□ -0.56
CXXC1-202ENST00000412036 TRBV10-2A0A0K0K1G8 114 aa11.55□□□□□ -0.56
CXXC1-202ENST00000412036 RTL8CO15255 209 aa11.55□□□□□ -0.56
CXXC1-202ENST00000412036 TNP2Q05952 138 aa11.55□□□□□ -0.56
CXXC1-202ENST00000412036 OR13C6PQ8NH95 151 aa11.55□□□□□ -0.56
CXXC1-202ENST00000412036 LINC01600Q96MT4 127 aa11.55□□□□□ -0.56
CXXC1-202ENST00000412036 TRAV13-2A0A0B4J235 113 aa11.55□□□□□ -0.56
CXXC1-202ENST00000412036 PANO1I0J062 215 aa11.55□□□□□ -0.56
CXXC1-202ENST00000412036 CHTF8P0CG12 524 aa11.55□□□□□ -0.56
CXXC1-202ENST00000412036 TEX49A0A1B0GTD5 131 aa11.54□□□□□ -0.56
CXXC1-202ENST00000412036 COX6CP09669 75 aa11.52□□□□□ -0.56
CXXC1-202ENST00000412036 FAM218AQ96MZ4 157 aa11.52□□□□□ -0.56
CXXC1-202ENST00000412036 IGKV2-24A0A0C4DH68 120 aa11.52□□□□□ -0.57
CXXC1-202ENST00000412036 LST1O00453 97 aa11.52□□□□□ -0.57
CXXC1-202ENST00000412036 TRBV10-3A0A0K0K1G6 114 aa11.51□□□□□ -0.57
CXXC1-202ENST00000412036 LOC107984640A0A0U1RRK4 108 aa11.51□□□□□ -0.57
CXXC1-202ENST00000412036 C9orf163Q8N9P6 203 aa11.51□□□□□ -0.57
CXXC1-202ENST00000412036 IGLV6-57P01721 117 aa11.5□□□□□ -0.57
CXXC1-202ENST00000412036 RPL28P46779 137 aaKnown RBP11.5□□□□□ -0.57
CXXC1-202ENST00000412036 C14orf177Q52M58 125 aa11.5□□□□□ -0.57
CXXC1-202ENST00000412036 SDIM1Q6ZPB5 146 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms