RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 RRAS2P62070 204 aaPredicted RBP1.18□□□□□ -2.22
RNU6-1140P-201ENST00000410517 SS18Q15532 418 aa1.18□□□□□ -2.22
RNU6-1140P-201ENST00000410517 ASB16-AS1Q495Z4 193 aa1.18□□□□□ -2.22
RNU6-1140P-201ENST00000410517 EXOC3-AS1Q8N2X6 119 aa1.18□□□□□ -2.22
RNU6-1140P-201ENST00000410517 TOMM5Q8N4H5 51 aa1.18□□□□□ -2.22
RNU6-1140P-201ENST00000410517 OR2T35Q8NGX2 323 aa1.18□□□□□ -2.22
RNU6-1140P-201ENST00000410517 MCFD2Q8NI22 146 aa1.18□□□□□ -2.22
RNU6-1140P-201ENST00000410517 SUN5Q8TC36 379 aa1.18□□□□□ -2.22
RNU6-1140P-201ENST00000410517 AP1S3Q96PC3 154 aa1.18□□□□□ -2.22
RNU6-1140P-201ENST00000410517 MGST2Q99735 147 aa1.18□□□□□ -2.22
RNU6-1140P-201ENST00000410517 CCDC32Q9BV29 185 aa1.18□□□□□ -2.22
RNU6-1140P-201ENST00000410517 ZNF471Q9BX82 626 aaPredicted RBP1.18□□□□□ -2.22
RNU6-1140P-201ENST00000410517 NPCDR1Q9BY65 106 aa1.18□□□□□ -2.22
RNU6-1140P-201ENST00000410517 PARD6GQ9BYG4 376 aaPredicted RBP1.18□□□□□ -2.22
RNU6-1140P-201ENST00000410517 SSPOA2VEC9 5147 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 IGKV2D-26A0A0A0MRZ7 120 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 MUC21A0A0G2JKD1 596 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 MUC21A0A140T8X8 626 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 A0A1W2PRE2 83 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 F2Z2F3 143 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 TCRAP04437 139 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 TRGC1P0CF51 173 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 RNASE3P12724 160 aaKnown RBP1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 FGF7P21781 194 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 RPL12P30050 165 aaKnown RBP1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 S100A5P33763 92 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 RPS20P60866 119 aaKnown RBP1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 TMEM258P61165 79 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 RPS29P62273 56 aaKnown RBP1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 UBE2BP63146 152 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 SERF2P84101 59 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 ZNF56Q15929 161 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 FAM74A4Q5TZK3 123 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 MIC13Q5XKP0 118 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 LYZL1Q6UWQ5 148 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 GOLT1AQ6ZVE7 132 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 SMIM15Q7Z3B0 74 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 COMMD7Q86VX2 200 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 DAND5Q8N907 189 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 OR5A1Q8NGJ0 315 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 SMCR5Q8TEV8 140 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 CNBD2Q96M20 576 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 BIN3Q9NQY0 253 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 MRPL35Q9NZE8 188 aaKnown RBP1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 ARL2-SNX15V9GYD0 113 aa1.17□□□□□ -2.22
RNU6-1140P-201ENST00000410517 A0A096LNI7 61 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 TRBV30A0A0K0K1B3 111 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 UBE2L5PA0A1B0GUS4 154 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 C9orf170A2RU37 121 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 C11orf86A6NJI1 115 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 J3QQQ9 107 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 M0R381 172 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 COX7A2LO14548 114 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 NDUFA1O15239 70 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 NDUFB6O95139 128 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 SPINK1P00995 79 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 ARMS2P0C7Q2 107 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 PYYP10082 97 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 AQP4P55087 323 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 LINC00313P59037 77 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 UBE2G1P62253 170 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 PPP1R1AQ13522 171 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 JOSD1Q15040 202 aaPredicted RBP1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 NEDD8Q15843 81 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 NDUFA5Q16718 116 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 C9orf116Q5BN46 136 aaPredicted RBP1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 SPANXN1Q5VSR9 72 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 KRTAP26-1Q6PEX3 210 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 IZUMO2Q6UXV1 221 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 FAM167A-AS1Q96KT0 104 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 HYLS1Q96M11 299 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 WDR61Q9GZS3 305 aaKnown RBP1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 NIT2Q9NQR4 276 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 TP73-AS1Q9UF72 201 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 EPDR1Q9UM22 224 aa1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 MACF1Q9UPN3 7388 aaKnown RBP1.16□□□□□ -2.22
RNU6-1140P-201ENST00000410517 CST7O76096 145 aa1.15□□□□□ -2.23
RNU6-1140P-201ENST00000410517 IFNA1P01562 189 aa1.15□□□□□ -2.23
RNU6-1140P-201ENST00000410517 NCS1P62166 190 aa1.15□□□□□ -2.23
RNU6-1140P-201ENST00000410517 S100A12P80511 92 aa1.15□□□□□ -2.23
RNU6-1140P-201ENST00000410517 RGS21Q2M5E4 152 aa1.15□□□□□ -2.23
RNU6-1140P-201ENST00000410517 TRIQKQ629K1 86 aa1.15□□□□□ -2.23
RNU6-1140P-201ENST00000410517 MIR17HGQ75NE6 70 aa1.15□□□□□ -2.23
RNU6-1140P-201ENST00000410517 TNFSF18Q9UNG2 199 aa1.15□□□□□ -2.23
RNU6-1140P-201ENST00000410517 UBE2D4Q9Y2X8 147 aa1.15□□□□□ -2.23
RNU6-1140P-201ENST00000410517 MUC17Q685J3 4493 aa1.15□□□□□ -2.23
RNU6-1140P-201ENST00000410517 SYNE2Q8WXH0 6885 aaKnown RBP1.15□□□□□ -2.23
RNU6-1140P-201ENST00000410517 USH2AO75445 5202 aa1.14□□□□□ -2.23
RNU6-1140P-201ENST00000410517 H3BVH4 76 aa1.14□□□□□ -2.23
RNU6-1140P-201ENST00000410517 I3L3M4 83 aa1.14□□□□□ -2.23
RNU6-1140P-201ENST00000410517 M0QY20 66 aa1.14□□□□□ -2.23
RNU6-1140P-201ENST00000410517 M0R2T5 61 aa1.14□□□□□ -2.23
RNU6-1140P-201ENST00000410517 BCE1O60756 84 aa1.14□□□□□ -2.23
RNU6-1140P-201ENST00000410517 G0S2P27469 103 aa1.14□□□□□ -2.23
RNU6-1140P-201ENST00000410517 SEC11AP67812 179 aa1.14□□□□□ -2.23
RNU6-1140P-201ENST00000410517 IFITM2Q01629 132 aa1.14□□□□□ -2.23
RNU6-1140P-201ENST00000410517 C1orf195Q5TG92 126 aa1.14□□□□□ -2.23
RNU6-1140P-201ENST00000410517 SFTA2Q6UW10 78 aa1.14□□□□□ -2.23
RNU6-1140P-201ENST00000410517 NUP35Q8NFH5 326 aa1.14□□□□□ -2.23
RNU6-1140P-201ENST00000410517 PSMG3Q9BT73 122 aaPredicted RBP1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms