RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 CGB3P0DN86 165 aa3.54□□□□□ -1.84
R3HDM1-204ENST00000410054 CGB7P0DN87 165 aa3.54□□□□□ -1.84
R3HDM1-204ENST00000410054 LY6G6DO95868 133 aa3.54□□□□□ -1.84
R3HDM1-204ENST00000410054 COL4A6Q14031 1691 aa3.54□□□□□ -1.84
R3HDM1-204ENST00000410054 PINLYPA6NC86 204 aa3.53□□□□□ -1.84
R3HDM1-204ENST00000410054 SPINK7P58062 85 aa3.53□□□□□ -1.84
R3HDM1-204ENST00000410054 PLXNB3Q9ULL4 1909 aa3.53□□□□□ -1.84
R3HDM1-204ENST00000410054 BOD1L1Q8NFC6 3051 aa3.53□□□□□ -1.84
R3HDM1-204ENST00000410054 LY6EQ16553 131 aa3.53□□□□□ -1.84
R3HDM1-204ENST00000410054 CCL14Q16627 93 aa3.53□□□□□ -1.84
R3HDM1-204ENST00000410054 ANGP03950 147 aaKnown RBP3.53□□□□□ -1.84
R3HDM1-204ENST00000410054 THSD7BQ9C0I4 1608 aa3.52□□□□□ -1.85
R3HDM1-204ENST00000410054 IGKV2-24A0A0C4DH68 120 aa3.52□□□□□ -1.85
R3HDM1-204ENST00000410054 WT1-ASQ06250 92 aa3.52□□□□□ -1.85
R3HDM1-204ENST00000410054 KPRPQ5T749 579 aaPredicted RBP3.52□□□□□ -1.85
R3HDM1-204ENST00000410054 USMG5Q96IX5 58 aa3.52□□□□□ -1.85
R3HDM1-204ENST00000410054 KLK12Q9UKR0 248 aa3.52□□□□□ -1.85
R3HDM1-204ENST00000410054 POLR2KP53803 58 aaKnown RBP3.52□□□□□ -1.85
R3HDM1-204ENST00000410054 LHBP01229 141 aa3.51□□□□□ -1.85
R3HDM1-204ENST00000410054 KRTAP25-1Q3LHN0 102 aa3.51□□□□□ -1.85
R3HDM1-204ENST00000410054 TMEM131Q92545 1883 aa3.51□□□□□ -1.85
R3HDM1-204ENST00000410054 PCNX1Q96RV3 2341 aa3.51□□□□□ -1.85
R3HDM1-204ENST00000410054 SPINK13Q1W4C9 94 aa3.51□□□□□ -1.85
R3HDM1-204ENST00000410054 LYPD2Q6UXB3 125 aa3.51□□□□□ -1.85
R3HDM1-204ENST00000410054 CNFNQ9BYD5 112 aa3.51□□□□□ -1.85
R3HDM1-204ENST00000410054 LINC00959A0A1B0GUT2 108 aa3.51□□□□□ -1.85
R3HDM1-204ENST00000410054 C9orf129Q5T035 196 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-204ENST00000410054 OBSL1O75147 1896 aa3.51□□□□□ -1.85
R3HDM1-204ENST00000410054 IGKV1OR2-108A0A075B7D4 117 aa3.5□□□□□ -1.85
R3HDM1-204ENST00000410054 CRIP1P50238 77 aa3.5□□□□□ -1.85
R3HDM1-204ENST00000410054 CLPSL2Q6UWE3 100 aa3.5□□□□□ -1.85
R3HDM1-204ENST00000410054 TFF2Q03403 129 aa3.5□□□□□ -1.85
R3HDM1-204ENST00000410054 Q8IZM0 81 aa3.5□□□□□ -1.85
R3HDM1-204ENST00000410054 FLVCR1-AS1Q8TAF5 88 aa3.5□□□□□ -1.85
R3HDM1-204ENST00000410054 PLXNA2O75051 1894 aa3.5□□□□□ -1.85
R3HDM1-204ENST00000410054 NOTCH3Q9UM47 2321 aa3.49□□□□□ -1.85
R3HDM1-204ENST00000410054 GAS8-AS1O95177 125 aa3.49□□□□□ -1.85
R3HDM1-204ENST00000410054 IGKV1-17P01599 117 aa3.49□□□□□ -1.85
R3HDM1-204ENST00000410054 C9orf163Q8N9P6 203 aa3.49□□□□□ -1.85
R3HDM1-204ENST00000410054 RHPN1-AS1Q9BWJ2 59 aa3.49□□□□□ -1.85
R3HDM1-204ENST00000410054 PRO3102Q9H379 93 aa3.49□□□□□ -1.85
R3HDM1-204ENST00000410054 KMT2EQ8IZD2 1858 aa3.49□□□□□ -1.85
R3HDM1-204ENST00000410054 HTN3P15516 51 aa3.49□□□□□ -1.85
R3HDM1-204ENST00000410054 IGLV6-57P01721 117 aa3.49□□□□□ -1.85
R3HDM1-204ENST00000410054 Q8N7P7 452 aa3.49□□□□□ -1.85
R3HDM1-204ENST00000410054 TYMSOSQ8TAI1 123 aa3.49□□□□□ -1.85
R3HDM1-204ENST00000410054 IGLV2-18A0A075B6J9 118 aa3.48□□□□□ -1.85
R3HDM1-204ENST00000410054 LINC00483Q53H64 154 aa3.48□□□□□ -1.85
R3HDM1-204ENST00000410054 GVINP1Q7Z2Y8 2422 aa3.48□□□□□ -1.85
R3HDM1-204ENST00000410054 LINC01546A6NGU7 62 aa3.48□□□□□ -1.85
R3HDM1-204ENST00000410054 C1orf229Q6ZS94 237 aaPredicted RBP3.48□□□□□ -1.85
R3HDM1-204ENST00000410054 MAP1BP46821 2468 aaKnown RBP3.48□□□□□ -1.85
R3HDM1-204ENST00000410054 FAM186AA6NE01 2351 aa3.48□□□□□ -1.85
R3HDM1-204ENST00000410054 IGLV4-60A0A075B6I1 120 aa3.47□□□□□ -1.85
R3HDM1-204ENST00000410054 A0A087WSZ3 146 aa3.47□□□□□ -1.85
R3HDM1-204ENST00000410054 CCL19Q99731 98 aa3.47□□□□□ -1.85
R3HDM1-204ENST00000410054 TTTY12Q9BZ98 90 aa3.47□□□□□ -1.85
R3HDM1-204ENST00000410054 EGFEM1PQ0D2K5 195 aa3.47□□□□□ -1.85
R3HDM1-204ENST00000410054 Q6ZR54 194 aa3.47□□□□□ -1.85
R3HDM1-204ENST00000410054 M0QY20 66 aa3.46□□□□□ -1.86
R3HDM1-204ENST00000410054 NBASA2RRP1 2371 aa3.46□□□□□ -1.86
R3HDM1-204ENST00000410054 IGKV2D-24A0A075B6R9 120 aa3.46□□□□□ -1.86
R3HDM1-204ENST00000410054 A0A096LNI7 61 aa3.45□□□□□ -1.86
R3HDM1-204ENST00000410054 DEFB131BA0A096LNP1 70 aa3.45□□□□□ -1.86
R3HDM1-204ENST00000410054 ZFP36P26651 326 aaKnown RBP3.45□□□□□ -1.86
R3HDM1-204ENST00000410054 IGKV1D-37A0A075B6S9 117 aa3.45□□□□□ -1.86
R3HDM1-204ENST00000410054 TECTAO75443 2155 aa3.45□□□□□ -1.86
R3HDM1-204ENST00000410054 KIAA1549LQ6ZVL6 1849 aa3.45□□□□□ -1.86
R3HDM1-204ENST00000410054 MGAQ8IWI9 3026 aa3.45□□□□□ -1.86
R3HDM1-204ENST00000410054 IGLV1-47P01700 117 aa3.45□□□□□ -1.86
R3HDM1-204ENST00000410054 P0C879 139 aa3.45□□□□□ -1.86
R3HDM1-204ENST00000410054 ST20-AS1Q8NBB2 130 aa3.45□□□□□ -1.86
R3HDM1-204ENST00000410054 RAI1Q7Z5J4 1906 aaPredicted RBP3.45□□□□□ -1.86
R3HDM1-204ENST00000410054 SPTA1P02549 2419 aa3.45□□□□□ -1.86
R3HDM1-204ENST00000410054 F8P00451 2351 aa3.45□□□□□ -1.86
R3HDM1-204ENST00000410054 A0A1B0GVX0 72 aa3.45□□□□□ -1.86
R3HDM1-204ENST00000410054 ODF3BA8MYP8 253 aa3.45□□□□□ -1.86
R3HDM1-204ENST00000410054 DEFB133Q30KQ1 61 aa3.45□□□□□ -1.86
R3HDM1-204ENST00000410054 KCNQ1DNQ9H478 68 aa3.45□□□□□ -1.86
R3HDM1-204ENST00000410054 COL4A3Q01955 1670 aa3.45□□□□□ -1.86
R3HDM1-204ENST00000410054 A0A1W2PNU3 283 aaPredicted RBP3.44□□□□□ -1.86
R3HDM1-204ENST00000410054 CASC10Q5T4H9 136 aa3.44□□□□□ -1.86
R3HDM1-204ENST00000410054 KRTAP23-1A1A580 65 aa3.44□□□□□ -1.86
R3HDM1-204ENST00000410054 LTBP2Q14767 1821 aa3.44□□□□□ -1.86
R3HDM1-204ENST00000410054 PRR9Q5T870 116 aa3.44□□□□□ -1.86
R3HDM1-204ENST00000410054 RP1L1Q8IWN7 2480 aaPredicted RBP3.44□□□□□ -1.86
R3HDM1-204ENST00000410054 APLNQ9ULZ1 77 aa3.43□□□□□ -1.86
R3HDM1-204ENST00000410054 NBEAQ8NFP9 2946 aa3.43□□□□□ -1.86
R3HDM1-204ENST00000410054 DEFB130BP0DP73 79 aa3.43□□□□□ -1.86
R3HDM1-204ENST00000410054 DEFB130AP0DP74 79 aa3.43□□□□□ -1.86
R3HDM1-204ENST00000410054 DEFB131AP59861 70 aa3.43□□□□□ -1.86
R3HDM1-204ENST00000410054 MUC22E2RYF6 1773 aaPredicted RBP3.43□□□□□ -1.86
R3HDM1-204ENST00000410054 A0A1W2PNM2 257 aa3.43□□□□□ -1.86
R3HDM1-204ENST00000410054 CSMD3Q7Z407 3707 aa3.43□□□□□ -1.86
R3HDM1-204ENST00000410054 A0A0C4DFX4 3053 aa3.43□□□□□ -1.86
R3HDM1-204ENST00000410054 SPINK6Q6UWN8 80 aa3.42□□□□□ -1.86
R3HDM1-204ENST00000410054 H3BUA1 57 aa3.42□□□□□ -1.86
R3HDM1-204ENST00000410054 IGKV2D-30A0A075B6S6 120 aa3.42□□□□□ -1.86
R3HDM1-204ENST00000410054 K7EQZ3 153 aa3.42□□□□□ -1.86
R3HDM1-204ENST00000410054 PTPRBP23467 1997 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms