RNA–Protein interactions for RNA: ENST00000409486.6

PPM1B-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best)

Gene PPM1B, Length 1,481 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-207ENST00000409486 SMIM13P0DJ93 91 aa11.76□□□□□ -0.53
PPM1B-207ENST00000409486 SFTA2Q6UW10 78 aa11.76□□□□□ -0.53
PPM1B-207ENST00000409486 MRPL55Q7Z7F7 128 aaKnown RBP11.76□□□□□ -0.53
PPM1B-207ENST00000409486 KRTAP29-1A8MX34 341 aaPredicted RBP11.75□□□□□ -0.53
PPM1B-207ENST00000409486 LGALS3P17931 250 aaKnown RBP11.75□□□□□ -0.53
PPM1B-207ENST00000409486 LBHQ53QV2 105 aaPredicted RBP11.75□□□□□ -0.53
PPM1B-207ENST00000409486 PLEKHB2Q96CS7 222 aa11.75□□□□□ -0.53
PPM1B-207ENST00000409486 MYMXA0A1B0GTQ4 84 aa11.74□□□□□ -0.53
PPM1B-207ENST00000409486 C3orf79P0CE67 100 aa11.74□□□□□ -0.53
PPM1B-207ENST00000409486 J3QQQ9 107 aa11.73□□□□□ -0.53
PPM1B-207ENST00000409486 COX17Q14061 63 aa11.73□□□□□ -0.53
PPM1B-207ENST00000409486 SPINK6Q6UWN8 80 aa11.72□□□□□ -0.53
PPM1B-207ENST00000409486 LINC00167Q96N53 147 aa11.72□□□□□ -0.53
PPM1B-207ENST00000409486 IGLV7-43P04211 117 aa11.71□□□□□ -0.53
PPM1B-207ENST00000409486 PET117Q6UWS5 81 aa11.71□□□□□ -0.53
PPM1B-207ENST00000409486 IGKV2-28A0A075B6P5 120 aa11.7□□□□□ -0.54
PPM1B-207ENST00000409486 OXTP01178 125 aa11.7□□□□□ -0.54
PPM1B-207ENST00000409486 IGKV2D-28P01615 120 aa11.7□□□□□ -0.54
PPM1B-207ENST00000409486 HERV-K104P63124 156 aa11.7□□□□□ -0.54
PPM1B-207ENST00000409486 MIR7-3HGQ8N6C7 128 aa11.7□□□□□ -0.54
PPM1B-207ENST00000409486 DAND5Q8N907 189 aa11.7□□□□□ -0.54
PPM1B-207ENST00000409486 LRP1Q07954 4544 aaKnown RBP11.7□□□□□ -0.54
PPM1B-207ENST00000409486 AKR1D1P51857 326 aa11.7□□□□□ -0.54
PPM1B-207ENST00000409486 LINC01545Q5VT33 79 aa11.7□□□□□ -0.54
PPM1B-207ENST00000409486 DMBT1Q9UGM3 2413 aaPredicted RBP11.69□□□□□ -0.54
PPM1B-207ENST00000409486 Q8NDZ9 215 aa11.69□□□□□ -0.54
PPM1B-207ENST00000409486 TP73-AS1Q9UF72 201 aa11.69□□□□□ -0.54
PPM1B-207ENST00000409486 PLA2G2DQ9UNK4 145 aa11.69□□□□□ -0.54
PPM1B-207ENST00000409486 SRSF9Q13242 221 aaKnown RBP eCLIP11.68□□□□□ -0.54
PPM1B-207ENST00000409486 ATOH7Q8N100 152 aa11.68□□□□□ -0.54
PPM1B-207ENST00000409486 VPREB1P12018 145 aa11.67□□□□□ -0.54
PPM1B-207ENST00000409486 RPL24P83731 157 aaKnown RBP11.67□□□□□ -0.54
PPM1B-207ENST00000409486 PYY3Q5JQD4 70 aa11.67□□□□□ -0.54
PPM1B-207ENST00000409486 REG3GQ6UW15 175 aa11.67□□□□□ -0.54
PPM1B-207ENST00000409486 NCR3O14931 201 aa11.66□□□□□ -0.54
PPM1B-207ENST00000409486 BOD1L2Q8IYS8 172 aa11.66□□□□□ -0.54
PPM1B-207ENST00000409486 FAT3Q8TDW7 4589 aa11.66□□□□□ -0.54
PPM1B-207ENST00000409486 IGLV5-37A0A075B6J1 123 aa11.65□□□□□ -0.54
PPM1B-207ENST00000409486 C20orf202A1L168 122 aa11.65□□□□□ -0.54
PPM1B-207ENST00000409486 E9PLD3 99 aa11.65□□□□□ -0.54
PPM1B-207ENST00000409486 NPC2P61916 151 aa11.65□□□□□ -0.54
PPM1B-207ENST00000409486 JOSD1Q15040 202 aaPredicted RBP11.65□□□□□ -0.54
PPM1B-207ENST00000409486 NMUP48645 174 aa11.63□□□□□ -0.55
PPM1B-207ENST00000409486 LINC00587B1AMM8 73 aa11.63□□□□□ -0.55
PPM1B-207ENST00000409486 DIRC1Q969H9 104 aa11.63□□□□□ -0.55
PPM1B-207ENST00000409486 TTTY13Q9BZ97 58 aa11.63□□□□□ -0.55
PPM1B-207ENST00000409486 HERC1Q15751 4861 aa11.62□□□□□ -0.55
PPM1B-207ENST00000409486 IGKV2D-26A0A0A0MRZ7 120 aa11.61□□□□□ -0.55
PPM1B-207ENST00000409486 TMEM238C9JI98 176 aa11.61□□□□□ -0.55
PPM1B-207ENST00000409486 BCE1O60756 84 aa11.6□□□□□ -0.55
PPM1B-207ENST00000409486 SCGB1D1O95968 90 aa11.6□□□□□ -0.55
PPM1B-207ENST00000409486 UBE2AP49459 152 aa11.6□□□□□ -0.55
PPM1B-207ENST00000409486 A0A0J9YXY3 114 aa11.59□□□□□ -0.55
PPM1B-207ENST00000409486 ZNF815PA8K554 130 aa11.59□□□□□ -0.55
PPM1B-207ENST00000409486 H0Y9J4 135 aa11.59□□□□□ -0.55
PPM1B-207ENST00000409486 MIEN1Q9BRT3 115 aa11.59□□□□□ -0.55
PPM1B-207ENST00000409486 MT1HL1P0DM35 61 aa11.58□□□□□ -0.56
PPM1B-207ENST00000409486 IGLV1-50A0A075B6I6 118 aa11.57□□□□□ -0.56
PPM1B-207ENST00000409486 LINC01600Q96MT4 127 aa11.57□□□□□ -0.56
PPM1B-207ENST00000409486 M0R378 163 aa11.57□□□□□ -0.56
PPM1B-207ENST00000409486 ZNF861PO60384 105 aa11.57□□□□□ -0.56
PPM1B-207ENST00000409486 FAM19A1Q7Z5A9 133 aa11.57□□□□□ -0.56
PPM1B-207ENST00000409486 RPL28P46779 137 aaKnown RBP11.56□□□□□ -0.56
PPM1B-207ENST00000409486 PRLHP81277 87 aa11.56□□□□□ -0.56
PPM1B-207ENST00000409486 ANKRD39Q53RE8 183 aa11.56□□□□□ -0.56
PPM1B-207ENST00000409486 ADAMTSL4-AS1Q5T5F5 129 aa11.56□□□□□ -0.56
PPM1B-207ENST00000409486 SMIM6P0DI80 62 aa11.54□□□□□ -0.56
PPM1B-207ENST00000409486 TMEM126AQ9H061 195 aa11.54□□□□□ -0.56
PPM1B-207ENST00000409486 PRR26Q8N8Z3 221 aa11.52□□□□□ -0.56
PPM1B-207ENST00000409486 SCGB1D4Q6XE38 83 aa11.51□□□□□ -0.57
PPM1B-207ENST00000409486 LINC00518Q8N0U6 118 aa11.51□□□□□ -0.57
PPM1B-207ENST00000409486 TRBV10-3A0A0K0K1G6 114 aa11.51□□□□□ -0.57
PPM1B-207ENST00000409486 EIF4EBP3O60516 100 aaPredicted RBP11.51□□□□□ -0.57
PPM1B-207ENST00000409486 SOSTDC1Q6X4U4 206 aa11.51□□□□□ -0.57
PPM1B-207ENST00000409486 PCP2Q8IVA1 136 aa11.49□□□□□ -0.57
PPM1B-207ENST00000409486 C12orf57Q99622 126 aa11.49□□□□□ -0.57
PPM1B-207ENST00000409486 S100A7L2Q5SY68 101 aa11.47□□□□□ -0.57
PPM1B-207ENST00000409486 LITAFQ99732 161 aa11.47□□□□□ -0.57
PPM1B-207ENST00000409486 HIGD2AQ9BW72 106 aa11.47□□□□□ -0.57
PPM1B-207ENST00000409486 ANAPC11Q9NYG5 84 aa11.47□□□□□ -0.57
PPM1B-207ENST00000409486 HSBP1L1C9JCN9 74 aa11.46□□□□□ -0.57
PPM1B-207ENST00000409486 DDTP30046 118 aa11.46□□□□□ -0.57
PPM1B-207ENST00000409486 LINC00308Q8TCZ7 52 aa11.46□□□□□ -0.57
PPM1B-207ENST00000409486 SPANXB1Q9NS25 103 aaPredicted RBP11.46□□□□□ -0.57
PPM1B-207ENST00000409486 PRYO14603 147 aa11.45□□□□□ -0.58
PPM1B-207ENST00000409486 KRTAP1-4P0C5Y4 121 aa11.45□□□□□ -0.58
PPM1B-207ENST00000409486 KRTAP10-8P60410 259 aa11.45□□□□□ -0.58
PPM1B-207ENST00000409486 KRTAP13-1Q8IUC0 172 aa11.44□□□□□ -0.58
PPM1B-207ENST00000409486 PAM16Q9Y3D7 125 aa11.44□□□□□ -0.58
PPM1B-207ENST00000409486 ETDCA0A1B0GVM5 59 aa11.44□□□□□ -0.58
PPM1B-207ENST00000409486 TIMM17BO60830 172 aa11.44□□□□□ -0.58
PPM1B-207ENST00000409486 S100A12P80511 92 aa11.44□□□□□ -0.58
PPM1B-207ENST00000409486 LOC107984156A0A0G2JMH3 177 aa11.43□□□□□ -0.58
PPM1B-207ENST00000409486 ARL17AQ8IVW1 177 aa11.43□□□□□ -0.58
PPM1B-207ENST00000409486 OR13C6PQ8NH95 151 aa11.43□□□□□ -0.58
PPM1B-207ENST00000409486 VAMP8Q9BV40 100 aa11.43□□□□□ -0.58
PPM1B-207ENST00000409486 TNXBP22105 4242 aa11.41□□□□□ -0.58
PPM1B-207ENST00000409486 SPATA45Q537H7 98 aa11.41□□□□□ -0.58
PPM1B-207ENST00000409486 TRBV10-2A0A0K0K1G8 114 aa11.4□□□□□ -0.58
PPM1B-207ENST00000409486 NDUFC2O95298 119 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms