RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 IGKV2D-28P01615 120 aa10.37□□□□□ -0.75
SCAMP4-202ENST00000409472 LINC00337Q8N6G1 96 aa10.37□□□□□ -0.75
SCAMP4-202ENST00000409472 REG3AQ06141 175 aa10.37□□□□□ -0.75
SCAMP4-202ENST00000409472 CCL18P55774 89 aa10.36□□□□□ -0.75
SCAMP4-202ENST00000409472 CHCHD10Q8WYQ3 142 aaPredicted RBP10.36□□□□□ -0.75
SCAMP4-202ENST00000409472 NBEAL1Q6ZS30 2694 aa10.36□□□□□ -0.75
SCAMP4-202ENST00000409472 NDUFC2O95298 119 aa10.36□□□□□ -0.75
SCAMP4-202ENST00000409472 F8WDY8 70 aa10.35□□□□□ -0.75
SCAMP4-202ENST00000409472 C6orf226Q5I0X4 101 aa10.35□□□□□ -0.75
SCAMP4-202ENST00000409472 SND1-IT1Q9HBX3 110 aa10.35□□□□□ -0.75
SCAMP4-202ENST00000409472 USP17L23D6RBM5 183 aa10.34□□□□□ -0.75
SCAMP4-202ENST00000409472 IBA57-AS1B1ANH7 110 aa10.33□□□□□ -0.76
SCAMP4-202ENST00000409472 FAM218AQ96MZ4 157 aa10.33□□□□□ -0.76
SCAMP4-202ENST00000409472 KIAA0087Q14695 138 aa10.32□□□□□ -0.76
SCAMP4-202ENST00000409472 CD164L2Q6UWJ8 174 aa10.32□□□□□ -0.76
SCAMP4-202ENST00000409472 Q8IZM0 81 aa10.32□□□□□ -0.76
SCAMP4-202ENST00000409472 Q6ZTC4 211 aa10.32□□□□□ -0.76
SCAMP4-202ENST00000409472 IGKV3D-7A0A0C4DH55 119 aa10.31□□□□□ -0.76
SCAMP4-202ENST00000409472 EGFEM1PQ0D2K5 195 aa10.31□□□□□ -0.76
SCAMP4-202ENST00000409472 LELP1Q5T871 98 aa10.31□□□□□ -0.76
SCAMP4-202ENST00000409472 C22orf24Q9Y442 160 aa10.31□□□□□ -0.76
SCAMP4-202ENST00000409472 CRPP02741 224 aa10.31□□□□□ -0.76
SCAMP4-202ENST00000409472 C9orf116Q5BN46 136 aaPredicted RBP10.31□□□□□ -0.76
SCAMP4-202ENST00000409472 KLK12Q9UKR0 248 aa10.3□□□□□ -0.76
SCAMP4-202ENST00000409472 LYPD5Q6UWN5 251 aa10.29□□□□□ -0.76
SCAMP4-202ENST00000409472 LINC01561Q8N1V8 128 aa10.29□□□□□ -0.76
SCAMP4-202ENST00000409472 C6orf223Q8N319 242 aa10.29□□□□□ -0.76
SCAMP4-202ENST00000409472 PRB2P02812 416 aaPredicted RBP10.28□□□□□ -0.76
SCAMP4-202ENST00000409472 WFDC10BQ8IUB3 73 aa10.28□□□□□ -0.76
SCAMP4-202ENST00000409472 C1orf43Q9BWL3 253 aa10.28□□□□□ -0.76
SCAMP4-202ENST00000409472 A0A087WVE0 104 aa10.28□□□□□ -0.76
SCAMP4-202ENST00000409472 FAM236DA0A1B0GTK5 79 aa10.28□□□□□ -0.76
SCAMP4-202ENST00000409472 FAM236CP0DP71 79 aa10.28□□□□□ -0.76
SCAMP4-202ENST00000409472 ENHOQ6UWT2 76 aa10.28□□□□□ -0.76
SCAMP4-202ENST00000409472 PRR3P79522 188 aaKnown RBP10.27□□□□□ -0.77
SCAMP4-202ENST00000409472 KPRPQ5T749 579 aaPredicted RBP10.27□□□□□ -0.77
SCAMP4-202ENST00000409472 SMIM11BQ8TCY0 68 aa10.27□□□□□ -0.77
SCAMP4-202ENST00000409472 SERP1Q9Y6X1 66 aa10.27□□□□□ -0.77
SCAMP4-202ENST00000409472 TRAV13-2A0A0B4J235 113 aa10.26□□□□□ -0.77
SCAMP4-202ENST00000409472 C10orf25Q5T742 122 aa10.26□□□□□ -0.77
SCAMP4-202ENST00000409472 A0A0J9YWU9 116 aa10.26□□□□□ -0.77
SCAMP4-202ENST00000409472 Q8NDZ9 215 aa10.26□□□□□ -0.77
SCAMP4-202ENST00000409472 PRR34Q9NV39 138 aa10.25□□□□□ -0.77
SCAMP4-202ENST00000409472 LINC00846Q9NV44 126 aa10.25□□□□□ -0.77
SCAMP4-202ENST00000409472 RPL28P46779 137 aaKnown RBP10.25□□□□□ -0.77
SCAMP4-202ENST00000409472 NANOS2P60321 138 aaKnown RBP10.25□□□□□ -0.77
SCAMP4-202ENST00000409472 S100A7L2Q5SY68 101 aa10.25□□□□□ -0.77
SCAMP4-202ENST00000409472 LINC00336Q6ZUF6 198 aa10.24□□□□□ -0.77
SCAMP4-202ENST00000409472 Q9HAA7 133 aa10.24□□□□□ -0.77
SCAMP4-202ENST00000409472 C14orf132Q9NPU4 83 aa10.24□□□□□ -0.77
SCAMP4-202ENST00000409472 EPM2AB3EWF7 344 aa10.24□□□□□ -0.77
SCAMP4-202ENST00000409472 ATP5EP2Q5VTU8 51 aa10.24□□□□□ -0.77
SCAMP4-202ENST00000409472 A0A087WYN8 130 aa10.23□□□□□ -0.77
SCAMP4-202ENST00000409472 GHRHP01286 108 aa10.23□□□□□ -0.77
SCAMP4-202ENST00000409472 UNQ6190/PRO20217Q6UXQ8 127 aa10.23□□□□□ -0.77
SCAMP4-202ENST00000409472 HUWE1Q7Z6Z7 4374 aaKnown RBP10.23□□□□□ -0.77
SCAMP4-202ENST00000409472 SPAG11BQ08648 103 aa10.22□□□□□ -0.77
SCAMP4-202ENST00000409472 OBSCN-AS1Q96MR7 158 aa10.22□□□□□ -0.77
SCAMP4-202ENST00000409472 ESRGQ1W209 222 aa10.2□□□□□ -0.78
SCAMP4-202ENST00000409472 MGAM2Q2M2H8 2515 aa10.2□□□□□ -0.78
SCAMP4-202ENST00000409472 C20orf197Q8N268 126 aa10.18□□□□□ -0.78
SCAMP4-202ENST00000409472 SMIM26A0A096LP01 95 aa10.17□□□□□ -0.78
SCAMP4-202ENST00000409472 H0YGX0 51 aa10.17□□□□□ -0.78
SCAMP4-202ENST00000409472 NCR3O14931 201 aa10.17□□□□□ -0.78
SCAMP4-202ENST00000409472 PKIGQ9Y2B9 76 aa10.17□□□□□ -0.78
SCAMP4-202ENST00000409472 DEFB131BA0A096LNP1 70 aa10.16□□□□□ -0.78
SCAMP4-202ENST00000409472 H3BNG1 76 aa10.16□□□□□ -0.78
SCAMP4-202ENST00000409472 C11orf45Q8TAV5 145 aa10.16□□□□□ -0.78
SCAMP4-202ENST00000409472 HIGD2BQ4VC39 106 aa10.16□□□□□ -0.78
SCAMP4-202ENST00000409472 C9orf129Q5T035 196 aaKnown RBP10.16□□□□□ -0.78
SCAMP4-202ENST00000409472 KRTAP26-1Q6PEX3 210 aa10.16□□□□□ -0.78
SCAMP4-202ENST00000409472 COX17Q14061 63 aa10.15□□□□□ -0.78
SCAMP4-202ENST00000409472 COL7A1Q02388 2944 aa10.15□□□□□ -0.78
SCAMP4-202ENST00000409472 LECT2O14960 151 aa10.15□□□□□ -0.79
SCAMP4-202ENST00000409472 BCE1O60756 84 aa10.15□□□□□ -0.79
SCAMP4-202ENST00000409472 TRAV23DV6A0A075B6W5 121 aa10.14□□□□□ -0.79
SCAMP4-202ENST00000409472 TRBV10-3A0A0K0K1G6 114 aa10.14□□□□□ -0.79
SCAMP4-202ENST00000409472 SLPIP03973 132 aa10.14□□□□□ -0.79
SCAMP4-202ENST00000409472 CCKP06307 115 aa10.14□□□□□ -0.79
SCAMP4-202ENST00000409472 C6orf48Q9UBA6 75 aa10.14□□□□□ -0.79
SCAMP4-202ENST00000409472 V9GYY9 64 aa10.14□□□□□ -0.79
SCAMP4-202ENST00000409472 H7BZZ5 65 aa10.12□□□□□ -0.79
SCAMP4-202ENST00000409472 SEC61GP60059 68 aa10.12□□□□□ -0.79
SCAMP4-202ENST00000409472 LYSTQ99698 3801 aa10.12□□□□□ -0.79
SCAMP4-202ENST00000409472 DNAH1Q9P2D7 4330 aa10.12□□□□□ -0.79
SCAMP4-202ENST00000409472 K7EIL1 84 aa10.11□□□□□ -0.79
SCAMP4-202ENST00000409472 XAGE1AQ9HD64 81 aa10.11□□□□□ -0.79
SCAMP4-202ENST00000409472 TRAV7A0A075B6U4 112 aa10.1□□□□□ -0.79
SCAMP4-202ENST00000409472 C15orf56Q8N910 161 aa10.1□□□□□ -0.79
SCAMP4-202ENST00000409472 STAB2Q8WWQ8 2551 aa10.09□□□□□ -0.79
SCAMP4-202ENST00000409472 KLKP1Q107X0 134 aa10.09□□□□□ -0.79
SCAMP4-202ENST00000409472 KRTAP21-3Q3LHN1 58 aa10.09□□□□□ -0.79
SCAMP4-202ENST00000409472 C1orf195Q5TG92 126 aa10.09□□□□□ -0.79
SCAMP4-202ENST00000409472 ORMDL1Q9P0S3 153 aa10.09□□□□□ -0.79
SCAMP4-202ENST00000409472 JMJD7-PLA2G4BH0Y9G9 81 aa10.09□□□□□ -0.79
SCAMP4-202ENST00000409472 UBL5Q9BZL1 73 aa10.08□□□□□ -0.8
SCAMP4-202ENST00000409472 ATP5EP56381 51 aaPredicted RBP10.07□□□□□ -0.8
SCAMP4-202ENST00000409472 C6orf99Q4VX62 202 aa10.07□□□□□ -0.8
SCAMP4-202ENST00000409472 FP248Q71RG6 208 aaPredicted RBP10.07□□□□□ -0.8
SCAMP4-202ENST00000409472 Q6ZRU5 148 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms