RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TINCRA0A1B0GVN0 87 aa6.5□□□□□ -1.37
SPTLC1P3-201ENST00000403408 SPINK1P00995 79 aa6.5□□□□□ -1.37
SPTLC1P3-201ENST00000403408 PFN2P35080 140 aa6.5□□□□□ -1.37
SPTLC1P3-201ENST00000403408 SEC11AP67812 179 aa6.5□□□□□ -1.37
SPTLC1P3-201ENST00000403408 TIMM17AQ99595 171 aa6.5□□□□□ -1.37
SPTLC1P3-201ENST00000403408 ORMDL2Q53FV1 153 aa6.49□□□□□ -1.37
SPTLC1P3-201ENST00000403408 TOMM6Q96B49 74 aa6.49□□□□□ -1.37
SPTLC1P3-201ENST00000403408 LAMTOR2Q9Y2Q5 125 aa6.49□□□□□ -1.37
SPTLC1P3-201ENST00000403408 RAB14P61106 215 aa6.48□□□□□ -1.37
SPTLC1P3-201ENST00000403408 PCOTHQ58A44 107 aa6.48□□□□□ -1.37
SPTLC1P3-201ENST00000403408 ATP5L2Q7Z4Y8 100 aa6.48□□□□□ -1.37
SPTLC1P3-201ENST00000403408 FCGBPQ9Y6R7 5405 aaPredicted RBP6.48□□□□□ -1.37
SPTLC1P3-201ENST00000403408 IGLV8-61A0A075B6I0 122 aa6.46□□□□□ -1.38
SPTLC1P3-201ENST00000403408 LINC00483Q53H64 154 aa6.46□□□□□ -1.38
SPTLC1P3-201ENST00000403408 SMCR5Q8TEV8 140 aa6.46□□□□□ -1.38
SPTLC1P3-201ENST00000403408 CST9LQ9H4G1 147 aa6.46□□□□□ -1.38
SPTLC1P3-201ENST00000403408 IGLV5-39A0A0G2JS06 123 aa6.45□□□□□ -1.38
SPTLC1P3-201ENST00000403408 KRTAP4-16G5E9R7 235 aaPredicted RBP6.45□□□□□ -1.38
SPTLC1P3-201ENST00000403408 ERASQ7Z444 233 aa6.45□□□□□ -1.38
SPTLC1P3-201ENST00000403408 ERG28Q9UKR5 140 aa6.45□□□□□ -1.38
SPTLC1P3-201ENST00000403408 K7EMI3 77 aa6.44□□□□□ -1.38
SPTLC1P3-201ENST00000403408 ATP5LO75964 103 aa6.44□□□□□ -1.38
SPTLC1P3-201ENST00000403408 MOBPQ13875 183 aa6.44□□□□□ -1.38
SPTLC1P3-201ENST00000403408 PAPPA-AS1Q5QFB9 102 aa6.44□□□□□ -1.38
SPTLC1P3-201ENST00000403408 ZNF625Q96I27 306 aaPredicted RBP6.44□□□□□ -1.38
SPTLC1P3-201ENST00000403408 SCGB3A1Q96QR1 104 aa6.44□□□□□ -1.38
SPTLC1P3-201ENST00000403408 ERC2-IT1O76042 136 aa6.43□□□□□ -1.38
SPTLC1P3-201ENST00000403408 SPRR1AP35321 89 aa6.43□□□□□ -1.38
SPTLC1P3-201ENST00000403408 RPS29P62273 56 aaKnown RBP6.43□□□□□ -1.38
SPTLC1P3-201ENST00000403408 RPL24P83731 157 aaKnown RBP6.43□□□□□ -1.38
SPTLC1P3-201ENST00000403408 KRTAP4-2Q9BYR5 136 aa6.43□□□□□ -1.38
SPTLC1P3-201ENST00000403408 NXT2Q9NPJ8 142 aaKnown RBP6.43□□□□□ -1.38
SPTLC1P3-201ENST00000403408 ZNF706Q9Y5V0 76 aaPredicted RBP6.43□□□□□ -1.38
SPTLC1P3-201ENST00000403408 A0A1B0GVG6 124 aa6.42□□□□□ -1.38
SPTLC1P3-201ENST00000403408 IGLV9-49A0A0B4J1Y8 123 aa6.41□□□□□ -1.38
SPTLC1P3-201ENST00000403408 SLC25A20O43772 301 aa6.41□□□□□ -1.38
SPTLC1P3-201ENST00000403408 KIAA1644Q3SXP7 199 aa6.41□□□□□ -1.38
SPTLC1P3-201ENST00000403408 GAGE2AQ6NT46 116 aa6.41□□□□□ -1.38
SPTLC1P3-201ENST00000403408 NDUFA12Q9UI09 145 aa6.41□□□□□ -1.38
SPTLC1P3-201ENST00000403408 ZNF22P17026 224 aaPredicted RBP6.4□□□□□ -1.38
SPTLC1P3-201ENST00000403408 M0R2T5 61 aa6.39□□□□□ -1.39
SPTLC1P3-201ENST00000403408 SSBP3-AS1Q7Z2R9 100 aa6.39□□□□□ -1.39
SPTLC1P3-201ENST00000403408 FAM19A2Q8N3H0 131 aa6.39□□□□□ -1.39
SPTLC1P3-201ENST00000403408 LINC01546A6NGU7 62 aa6.38□□□□□ -1.39
SPTLC1P3-201ENST00000403408 PRYO14603 147 aa6.38□□□□□ -1.39
SPTLC1P3-201ENST00000403408 IGLC3P0DOY3 106 aa6.38□□□□□ -1.39
SPTLC1P3-201ENST00000403408 COX17Q14061 63 aa6.38□□□□□ -1.39
SPTLC1P3-201ENST00000403408 PEA15Q15121 130 aa6.38□□□□□ -1.39
SPTLC1P3-201ENST00000403408 PMVKQ15126 192 aa6.38□□□□□ -1.39
SPTLC1P3-201ENST00000403408 AKAP14Q86UN6 197 aa6.38□□□□□ -1.39
SPTLC1P3-201ENST00000403408 KCNQ1DNQ9H478 68 aa6.38□□□□□ -1.39
SPTLC1P3-201ENST00000403408 C9orf92A6NGG3 77 aa6.37□□□□□ -1.39
SPTLC1P3-201ENST00000403408 A0A0U1RRA0 63 aa6.36□□□□□ -1.39
SPTLC1P3-201ENST00000403408 H3BRM9 83 aa6.36□□□□□ -1.39
SPTLC1P3-201ENST00000403408 LCE4AQ5TA78 99 aa6.36□□□□□ -1.39
SPTLC1P3-201ENST00000403408 Q9BRP9 147 aa6.36□□□□□ -1.39
SPTLC1P3-201ENST00000403408 B5MCH6 92 aa6.35□□□□□ -1.39
SPTLC1P3-201ENST00000403408 NCR3O14931 201 aa6.35□□□□□ -1.39
SPTLC1P3-201ENST00000403408 G0S2P27469 103 aa6.35□□□□□ -1.39
SPTLC1P3-201ENST00000403408 A0A096LNJ9 63 aa6.34□□□□□ -1.39
SPTLC1P3-201ENST00000403408 TRBV10-3A0A0K0K1G6 114 aa6.34□□□□□ -1.39
SPTLC1P3-201ENST00000403408 SYNE2Q8WXH0 6885 aaKnown RBP6.33□□□□□ -1.4
SPTLC1P3-201ENST00000403408 ETDCA0A1B0GVM5 59 aa6.33□□□□□ -1.4
SPTLC1P3-201ENST00000403408 LINC00158P58513 81 aa6.33□□□□□ -1.4
SPTLC1P3-201ENST00000403408 hCG_2014768A0A024R1R8 64 aa6.32□□□□□ -1.4
SPTLC1P3-201ENST00000403408 C11orf86A6NJI1 115 aa6.32□□□□□ -1.4
SPTLC1P3-201ENST00000403408 SMIM13P0DJ93 91 aa6.31□□□□□ -1.4
SPTLC1P3-201ENST00000403408 BOD1L2Q8IYS8 172 aa6.31□□□□□ -1.4
SPTLC1P3-201ENST00000403408 ANAPC16Q96DE5 110 aa6.3□□□□□ -1.4
SPTLC1P3-201ENST00000403408 KRTAP4-11Q9BYQ6 195 aa6.3□□□□□ -1.4
SPTLC1P3-201ENST00000403408 ST20-AS1Q8NBB2 130 aa6.29□□□□□ -1.4
SPTLC1P3-201ENST00000403408 URB1-AS1Q96HZ7 61 aa6.29□□□□□ -1.4
SPTLC1P3-201ENST00000403408 KRTAP9-8Q9BYQ0 159 aa6.29□□□□□ -1.4
SPTLC1P3-201ENST00000403408 MT-ND4LP03901 98 aa6.28□□□□□ -1.4
SPTLC1P3-201ENST00000403408 NDUFA6P56556 154 aa6.28□□□□□ -1.4
SPTLC1P3-201ENST00000403408 C9orf153Q5TBE3 101 aa6.28□□□□□ -1.4
SPTLC1P3-201ENST00000403408 COX6B2Q6YFQ2 88 aa6.28□□□□□ -1.4
SPTLC1P3-201ENST00000403408 HRCT1Q6UXD1 115 aa6.27□□□□□ -1.41
SPTLC1P3-201ENST00000403408 MIR7-3HGQ8N6C7 128 aa6.27□□□□□ -1.41
SPTLC1P3-201ENST00000403408 LINC01549A6NIU2 74 aa6.26□□□□□ -1.41
SPTLC1P3-201ENST00000403408 IGLV6-57P01721 117 aa6.26□□□□□ -1.41
SPTLC1P3-201ENST00000403408 TMEM170BQ5T4T1 132 aa6.26□□□□□ -1.41
SPTLC1P3-201ENST00000403408 Q6ZRX8 168 aa6.26□□□□□ -1.41
SPTLC1P3-201ENST00000403408 MACF1Q9UPN3 7388 aaKnown RBP6.25□□□□□ -1.41
SPTLC1P3-201ENST00000403408 TRAV9-1A0A075B6T8 112 aa6.25□□□□□ -1.41
SPTLC1P3-201ENST00000403408 TMEM223A0PJW6 202 aa6.24□□□□□ -1.41
SPTLC1P3-201ENST00000403408 EIF4EBP3O60516 100 aaPredicted RBP6.24□□□□□ -1.41
SPTLC1P3-201ENST00000403408 RPL37P61927 97 aaKnown RBP6.24□□□□□ -1.41
SPTLC1P3-201ENST00000403408 PMCHL1Q16048 86 aa6.24□□□□□ -1.41
SPTLC1P3-201ENST00000403408 KRTAP19-4Q3LI73 84 aa6.24□□□□□ -1.41
SPTLC1P3-201ENST00000403408 SFTA2Q6UW10 78 aa6.24□□□□□ -1.41
SPTLC1P3-201ENST00000403408 FA2HQ7L5A8 372 aa6.24□□□□□ -1.41
SPTLC1P3-201ENST00000403408 BAGE3Q86Y29 109 aa6.23□□□□□ -1.41
SPTLC1P3-201ENST00000403408 DDTP30046 118 aa6.22□□□□□ -1.41
SPTLC1P3-201ENST00000403408 CHTOPQ9Y3Y2 248 aaKnown RBP6.21□□□□□ -1.42
SPTLC1P3-201ENST00000403408 MEIG1Q5JSS6 88 aa6.2□□□□□ -1.42
SPTLC1P3-201ENST00000403408 SMCO4Q9NRQ5 59 aa6.2□□□□□ -1.42
SPTLC1P3-201ENST00000403408 LOC107984156A0A0G2JMH3 177 aa6.19□□□□□ -1.42
SPTLC1P3-201ENST00000403408 ARL17AQ8IVW1 177 aa6.19□□□□□ -1.42
SPTLC1P3-201ENST00000403408 LIMD2Q9BT23 127 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 250.3 ms