RNA–Protein interactions for RNA: ENST00000401498.6

PKDCC-202, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 5

Gene PKDCC, Length 1,550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-202ENST00000401498 VAMP8Q9BV40 100 aa18.79■□□□□ 0.6
PKDCC-202ENST00000401498 RPL37AP61513 92 aaKnown RBP18.78■□□□□ 0.6
PKDCC-202ENST00000401498 A0A0U1RRA0 63 aa18.77■□□□□ 0.6
PKDCC-202ENST00000401498 LINC00158P58513 81 aa18.77■□□□□ 0.6
PKDCC-202ENST00000401498 SND1-IT1Q9HBX3 110 aa18.77■□□□□ 0.6
PKDCC-202ENST00000401498 PAM16Q9Y3D7 125 aa18.77■□□□□ 0.6
PKDCC-202ENST00000401498 SMIM13P0DJ93 91 aa18.76■□□□□ 0.59
PKDCC-202ENST00000401498 MEIG1Q5JSS6 88 aa18.76■□□□□ 0.59
PKDCC-202ENST00000401498 PCLOQ9Y6V0 5065 aa18.76■□□□□ 0.59
PKDCC-202ENST00000401498 PCP2Q8IVA1 136 aa18.75■□□□□ 0.59
PKDCC-202ENST00000401498 SMIM6P0DI80 62 aa18.74■□□□□ 0.59
PKDCC-202ENST00000401498 M0QXV9 152 aa18.73■□□□□ 0.59
PKDCC-202ENST00000401498 SPATA45Q537H7 98 aa18.73■□□□□ 0.59
PKDCC-202ENST00000401498 PLA2G2DQ9UNK4 145 aa18.72■□□□□ 0.59
PKDCC-202ENST00000401498 LINC00587B1AMM8 73 aa18.72■□□□□ 0.59
PKDCC-202ENST00000401498 ZNF815PA8K554 130 aa18.71■□□□□ 0.59
PKDCC-202ENST00000401498 C22orf24Q9Y442 160 aa18.71■□□□□ 0.59
PKDCC-202ENST00000401498 MIR7-3HGQ8N6C7 128 aa18.68■□□□□ 0.58
PKDCC-202ENST00000401498 TP73-AS1Q9UF72 201 aa18.68■□□□□ 0.58
PKDCC-202ENST00000401498 KRTAP11-1Q8IUC1 163 aa18.67■□□□□ 0.58
PKDCC-202ENST00000401498 A0A0J9YXY3 114 aa18.66■□□□□ 0.58
PKDCC-202ENST00000401498 PRR3P79522 188 aaKnown RBP18.66■□□□□ 0.58
PKDCC-202ENST00000401498 IGLV5-37A0A075B6J1 123 aa18.64■□□□□ 0.58
PKDCC-202ENST00000401498 COX8AP10176 69 aa18.64■□□□□ 0.58
PKDCC-202ENST00000401498 Q8NDZ9 215 aa18.64■□□□□ 0.58
PKDCC-202ENST00000401498 INAFM2P0DMQ5 153 aa18.64■□□□□ 0.57
PKDCC-202ENST00000401498 S100A12P80511 92 aa18.63■□□□□ 0.57
PKDCC-202ENST00000401498 DAND5Q8N907 189 aa18.63■□□□□ 0.57
PKDCC-202ENST00000401498 PSORS1C2Q9UIG4 136 aa18.63■□□□□ 0.57
PKDCC-202ENST00000401498 VPREB1P12018 145 aa18.62■□□□□ 0.57
PKDCC-202ENST00000401498 MRPL55Q7Z7F7 128 aaKnown RBP18.62■□□□□ 0.57
PKDCC-202ENST00000401498 BOD1L2Q8IYS8 172 aa18.62■□□□□ 0.57
PKDCC-202ENST00000401498 C14orf144Q96I85 54 aa18.61■□□□□ 0.57
PKDCC-202ENST00000401498 HNRNPA3P51991 378 aaKnown RBP18.6■□□□□ 0.57
PKDCC-202ENST00000401498 UBE2BP63146 152 aa18.6■□□□□ 0.57
PKDCC-202ENST00000401498 LBHQ53QV2 105 aaPredicted RBP18.6■□□□□ 0.57
PKDCC-202ENST00000401498 NKAPP1Q8N9T2 125 aa18.59■□□□□ 0.57
PKDCC-202ENST00000401498 ADAMTSL4-AS1Q5T5F5 129 aa18.59■□□□□ 0.57
PKDCC-202ENST00000401498 RPL24P83731 157 aaKnown RBP18.58■□□□□ 0.56
PKDCC-202ENST00000401498 LINC00167Q96N53 147 aa18.58■□□□□ 0.56
PKDCC-202ENST00000401498 LITAFQ99732 161 aa18.58■□□□□ 0.56
PKDCC-202ENST00000401498 DLEU1O43261 78 aa18.57■□□□□ 0.56
PKDCC-202ENST00000401498 SCGB1D4Q6XE38 83 aa18.57■□□□□ 0.56
PKDCC-202ENST00000401498 PKHD1L1Q86WI1 4243 aa18.57■□□□□ 0.56
PKDCC-202ENST00000401498 TIMM17BO60830 172 aa18.55■□□□□ 0.56
PKDCC-202ENST00000401498 GAGE10A6NGK3 116 aa18.55■□□□□ 0.56
PKDCC-202ENST00000401498 C12orf57Q99622 126 aa18.55■□□□□ 0.56
PKDCC-202ENST00000401498 LOC107984156A0A0G2JMH3 177 aa18.54■□□□□ 0.56
PKDCC-202ENST00000401498 ARL17AQ8IVW1 177 aa18.54■□□□□ 0.56
PKDCC-202ENST00000401498 FLG2Q5D862 2391 aaPredicted RBP18.53■□□□□ 0.56
PKDCC-202ENST00000401498 C1orf137Q5JT78 98 aa18.53■□□□□ 0.56
PKDCC-202ENST00000401498 SLC25A34Q6PIV7 304 aa18.53■□□□□ 0.56
PKDCC-202ENST00000401498 RPL37AP8A6NKH3 93 aa18.52■□□□□ 0.56
PKDCC-202ENST00000401498 MYCBP2O75592 4640 aa18.49■□□□□ 0.55
PKDCC-202ENST00000401498 LINC00518Q8N0U6 118 aa18.49■□□□□ 0.55
PKDCC-202ENST00000401498 TMEM238C9JI98 176 aa18.48■□□□□ 0.55
PKDCC-202ENST00000401498 EIF4EBP3O60516 100 aaPredicted RBP18.48■□□□□ 0.55
PKDCC-202ENST00000401498 SOSTDC1Q6X4U4 206 aa18.48■□□□□ 0.55
PKDCC-202ENST00000401498 NPC2P61916 151 aa18.47■□□□□ 0.55
PKDCC-202ENST00000401498 MIEN1Q9BRT3 115 aa18.47■□□□□ 0.55
PKDCC-202ENST00000401498 SRSF9Q13242 221 aaKnown RBP eCLIP18.46■□□□□ 0.55
PKDCC-202ENST00000401498 IGKV2-28A0A075B6P5 120 aa18.45■□□□□ 0.54
PKDCC-202ENST00000401498 IGKV2D-28P01615 120 aa18.45■□□□□ 0.54
PKDCC-202ENST00000401498 C2orf91Q6ZV80 131 aa18.45■□□□□ 0.54
PKDCC-202ENST00000401498 SPANXDQ9BXN6 97 aa18.45■□□□□ 0.54
PKDCC-202ENST00000401498 SPANXCQ9NY87 97 aa18.45■□□□□ 0.54
PKDCC-202ENST00000401498 IGLV1-50A0A075B6I6 118 aa18.44■□□□□ 0.54
PKDCC-202ENST00000401498 M0R378 163 aa18.44■□□□□ 0.54
PKDCC-202ENST00000401498 PRO1933Q9H354 126 aa18.44■□□□□ 0.54
PKDCC-202ENST00000401498 IGLV7-43P04211 117 aa18.43■□□□□ 0.54
PKDCC-202ENST00000401498 NCR3O14931 201 aa18.42■□□□□ 0.54
PKDCC-202ENST00000401498 LINC00308Q8TCZ7 52 aa18.42■□□□□ 0.54
PKDCC-202ENST00000401498 SPANXB1Q9NS25 103 aaPredicted RBP18.42■□□□□ 0.54
PKDCC-202ENST00000401498 UQCR10Q9UDW1 63 aa18.42■□□□□ 0.54
PKDCC-202ENST00000401498 HIGD1BQ9P298 99 aa18.42■□□□□ 0.54
PKDCC-202ENST00000401498 SPINK6Q6UWN8 80 aa18.39■□□□□ 0.53
PKDCC-202ENST00000401498 LRP1Q07954 4544 aaKnown RBP18.38■□□□□ 0.53
PKDCC-202ENST00000401498 NDUFC2O95298 119 aa18.38■□□□□ 0.53
PKDCC-202ENST00000401498 Q6ZVH6 145 aa18.38■□□□□ 0.53
PKDCC-202ENST00000401498 FAT3Q8TDW7 4589 aa18.34■□□□□ 0.53
PKDCC-202ENST00000401498 TRBV10-2A0A0K0K1G8 114 aa18.34■□□□□ 0.53
PKDCC-202ENST00000401498 BCE1O60756 84 aa18.34■□□□□ 0.53
PKDCC-202ENST00000401498 IFITM1P13164 125 aa18.33■□□□□ 0.52
PKDCC-202ENST00000401498 TMEM126AQ9H061 195 aa18.32■□□□□ 0.52
PKDCC-202ENST00000401498 TRBV10-3A0A0K0K1G6 114 aa18.31■□□□□ 0.52
PKDCC-202ENST00000401498 REG3GQ6UW15 175 aa18.31■□□□□ 0.52
PKDCC-202ENST00000401498 MUSTN1Q8IVN3 82 aa18.31■□□□□ 0.52
PKDCC-202ENST00000401498 PPDPFQ9H3Y8 114 aa18.31■□□□□ 0.52
PKDCC-202ENST00000401498 HIST1H4GQ99525 98 aa18.3■□□□□ 0.52
PKDCC-202ENST00000401498 TSTD3H0UI37 97 aa18.3■□□□□ 0.52
PKDCC-202ENST00000401498 ZNF861PO60384 105 aa18.29■□□□□ 0.52
PKDCC-202ENST00000401498 COPS9Q8WXC6 57 aa18.29■□□□□ 0.52
PKDCC-202ENST00000401498 KCNQ1DNQ9H478 68 aa18.26■□□□□ 0.51
PKDCC-202ENST00000401498 DDTP30046 118 aa18.25■□□□□ 0.51
PKDCC-202ENST00000401498 KRTAP29-1A8MX34 341 aaPredicted RBP18.25■□□□□ 0.51
PKDCC-202ENST00000401498 KRTAP13-1Q8IUC0 172 aa18.25■□□□□ 0.51
PKDCC-202ENST00000401498 DIRC1Q969H9 104 aa18.25■□□□□ 0.51
PKDCC-202ENST00000401498 PRYO14603 147 aa18.24■□□□□ 0.51
PKDCC-202ENST00000401498 IGLV6-57P01721 117 aa18.24■□□□□ 0.51
PKDCC-202ENST00000401498 TAL2Q16559 108 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms