RNA–Protein interactions for RNA: ENST00000399892.6

SEH1L-202, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best) BASIC

Gene SEH1L, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-202ENST00000399892 HERC2O95714 4834 aa11.09□□□□□ -0.63
SEH1L-202ENST00000399892 UBE2BP63146 152 aa11.09□□□□□ -0.63
SEH1L-202ENST00000399892 RPL24P83731 157 aaKnown RBP11.09□□□□□ -0.63
SEH1L-202ENST00000399892 DAND5Q8N907 189 aa11.09□□□□□ -0.63
SEH1L-202ENST00000399892 MIEN1Q9BRT3 115 aa11.09□□□□□ -0.63
SEH1L-202ENST00000399892 JOSD1Q15040 202 aaPredicted RBP11.08□□□□□ -0.64
SEH1L-202ENST00000399892 KRTAP7-1Q8IUC3 87 aa11.08□□□□□ -0.64
SEH1L-202ENST00000399892 PLA2G2DQ9UNK4 145 aa11.08□□□□□ -0.64
SEH1L-202ENST00000399892 C22orf24Q9Y442 160 aa11.08□□□□□ -0.64
SEH1L-202ENST00000399892 KRTAP17-1Q9BYP8 105 aa11.07□□□□□ -0.64
SEH1L-202ENST00000399892 LBHQ53QV2 105 aaPredicted RBP11.07□□□□□ -0.64
SEH1L-202ENST00000399892 PCP2Q8IVA1 136 aa11.07□□□□□ -0.64
SEH1L-202ENST00000399892 BOD1L2Q8IYS8 172 aa11.06□□□□□ -0.64
SEH1L-202ENST00000399892 MRPL55Q7Z7F7 128 aaKnown RBP11.05□□□□□ -0.64
SEH1L-202ENST00000399892 TP73-AS1Q9UF72 201 aa11.05□□□□□ -0.64
SEH1L-202ENST00000399892 FAT1Q14517 4588 aa11.05□□□□□ -0.64
SEH1L-202ENST00000399892 TIMM17BO60830 172 aa11.04□□□□□ -0.64
SEH1L-202ENST00000399892 VAMP8Q9BV40 100 aa11.04□□□□□ -0.64
SEH1L-202ENST00000399892 NPC2P61916 151 aa11.03□□□□□ -0.64
SEH1L-202ENST00000399892 SRRM2Q9UQ35 2752 aaKnown RBP11.03□□□□□ -0.64
SEH1L-202ENST00000399892 IGLV5-37A0A075B6J1 123 aa11.02□□□□□ -0.64
SEH1L-202ENST00000399892 GAGE10A6NGK3 116 aa11.02□□□□□ -0.64
SEH1L-202ENST00000399892 TMEM238C9JI98 176 aa11.02□□□□□ -0.64
SEH1L-202ENST00000399892 VPREB1P12018 145 aa11.02□□□□□ -0.64
SEH1L-202ENST00000399892 ADAMTSL4-AS1Q5T5F5 129 aa11.02□□□□□ -0.64
SEH1L-202ENST00000399892 PAM16Q9Y3D7 125 aa11.02□□□□□ -0.64
SEH1L-202ENST00000399892 VPS13BQ7Z7G8 4022 aa11.02□□□□□ -0.65
SEH1L-202ENST00000399892 KRTAP4-5Q9BYR2 181 aa11.02□□□□□ -0.65
SEH1L-202ENST00000399892 LINC00167Q96N53 147 aa11.01□□□□□ -0.65
SEH1L-202ENST00000399892 PRR3P79522 188 aaKnown RBP11□□□□□ -0.65
SEH1L-202ENST00000399892 SPATA45Q537H7 98 aa11□□□□□ -0.65
SEH1L-202ENST00000399892 PYY3Q5JQD4 70 aa11□□□□□ -0.65
SEH1L-202ENST00000399892 PSORS1C2Q9UIG4 136 aa11□□□□□ -0.65
SEH1L-202ENST00000399892 RPL37AP8A6NKH3 93 aa11□□□□□ -0.65
SEH1L-202ENST00000399892 LITAFQ99732 161 aa11□□□□□ -0.65
SEH1L-202ENST00000399892 Q8NDZ9 215 aa10.99□□□□□ -0.65
SEH1L-202ENST00000399892 LOC107984156A0A0G2JMH3 177 aa10.98□□□□□ -0.65
SEH1L-202ENST00000399892 C1orf137Q5JT78 98 aa10.98□□□□□ -0.65
SEH1L-202ENST00000399892 ARL17AQ8IVW1 177 aa10.98□□□□□ -0.65
SEH1L-202ENST00000399892 NCR3O14931 201 aa10.98□□□□□ -0.65
SEH1L-202ENST00000399892 COPS9Q8WXC6 57 aa10.98□□□□□ -0.65
SEH1L-202ENST00000399892 IGKV2-28A0A075B6P5 120 aa10.97□□□□□ -0.65
SEH1L-202ENST00000399892 M0R378 163 aa10.97□□□□□ -0.65
SEH1L-202ENST00000399892 IGKV2D-28P01615 120 aa10.97□□□□□ -0.65
SEH1L-202ENST00000399892 COX8AP10176 69 aa10.97□□□□□ -0.65
SEH1L-202ENST00000399892 LINC00308Q8TCZ7 52 aa10.97□□□□□ -0.65
SEH1L-202ENST00000399892 KRTAP11-1Q8IUC1 163 aa10.96□□□□□ -0.65
SEH1L-202ENST00000399892 SPANXDQ9BXN6 97 aa10.96□□□□□ -0.65
SEH1L-202ENST00000399892 SPANXCQ9NY87 97 aa10.96□□□□□ -0.65
SEH1L-202ENST00000399892 KRTAP10-4P60372 401 aaPredicted RBP10.95□□□□□ -0.66
SEH1L-202ENST00000399892 SOSTDC1Q6X4U4 206 aa10.95□□□□□ -0.66
SEH1L-202ENST00000399892 INAFM2P0DMQ5 153 aa10.95□□□□□ -0.66
SEH1L-202ENST00000399892 Q6ZVH6 145 aa10.95□□□□□ -0.66
SEH1L-202ENST00000399892 C14orf144Q96I85 54 aa10.95□□□□□ -0.66
SEH1L-202ENST00000399892 NDUFC2O95298 119 aa10.94□□□□□ -0.66
SEH1L-202ENST00000399892 SRSF9Q13242 221 aaKnown RBP eCLIP10.94□□□□□ -0.66
SEH1L-202ENST00000399892 SPANXB1Q9NS25 103 aaPredicted RBP10.94□□□□□ -0.66
SEH1L-202ENST00000399892 EIF4EBP3O60516 100 aaPredicted RBP10.93□□□□□ -0.66
SEH1L-202ENST00000399892 IGLV1-50A0A075B6I6 118 aa10.93□□□□□ -0.66
SEH1L-202ENST00000399892 IFITM1P13164 125 aa10.93□□□□□ -0.66
SEH1L-202ENST00000399892 S100A12P80511 92 aa10.92□□□□□ -0.66
SEH1L-202ENST00000399892 SLC25A34Q6PIV7 304 aa10.91□□□□□ -0.66
SEH1L-202ENST00000399892 TRBV10-2A0A0K0K1G8 114 aa10.91□□□□□ -0.66
SEH1L-202ENST00000399892 DLEU1O43261 78 aa10.91□□□□□ -0.66
SEH1L-202ENST00000399892 S100A7L2Q5SY68 101 aa10.91□□□□□ -0.66
SEH1L-202ENST00000399892 IGLV7-43P04211 117 aa10.89□□□□□ -0.67
SEH1L-202ENST00000399892 MUSTN1Q8IVN3 82 aa10.89□□□□□ -0.67
SEH1L-202ENST00000399892 DDTP30046 118 aa10.88□□□□□ -0.67
SEH1L-202ENST00000399892 HNRNPA3P51991 378 aaKnown RBP10.88□□□□□ -0.67
SEH1L-202ENST00000399892 REG3GQ6UW15 175 aa10.88□□□□□ -0.67
SEH1L-202ENST00000399892 TRBV10-3A0A0K0K1G6 114 aa10.88□□□□□ -0.67
SEH1L-202ENST00000399892 BCE1O60756 84 aa10.88□□□□□ -0.67
SEH1L-202ENST00000399892 LINC00518Q8N0U6 118 aa10.87□□□□□ -0.67
SEH1L-202ENST00000399892 HIST1H4GQ99525 98 aa10.87□□□□□ -0.67
SEH1L-202ENST00000399892 TMEM126AQ9H061 195 aa10.87□□□□□ -0.67
SEH1L-202ENST00000399892 FLG2Q5D862 2391 aaPredicted RBP10.87□□□□□ -0.67
SEH1L-202ENST00000399892 ABCA13Q86UQ4 5058 aa10.87□□□□□ -0.67
SEH1L-202ENST00000399892 SPINK6Q6UWN8 80 aa10.86□□□□□ -0.67
SEH1L-202ENST00000399892 OR13C6PQ8NH95 151 aa10.86□□□□□ -0.67
SEH1L-202ENST00000399892 UBE2AP49459 152 aa10.86□□□□□ -0.67
SEH1L-202ENST00000399892 PPDPFQ9H3Y8 114 aa10.86□□□□□ -0.67
SEH1L-202ENST00000399892 PRYO14603 147 aa10.84□□□□□ -0.67
SEH1L-202ENST00000399892 RPL28P46779 137 aaKnown RBP10.84□□□□□ -0.67
SEH1L-202ENST00000399892 FAM19A1Q7Z5A9 133 aa10.84□□□□□ -0.67
SEH1L-202ENST00000399892 KCNQ1DNQ9H478 68 aa10.83□□□□□ -0.68
SEH1L-202ENST00000399892 HIGD1BQ9P298 99 aa10.83□□□□□ -0.68
SEH1L-202ENST00000399892 CBY1Q9Y3M2 126 aa10.83□□□□□ -0.68
SEH1L-202ENST00000399892 IGLV6-57P01721 117 aa10.82□□□□□ -0.68
SEH1L-202ENST00000399892 DIRC1Q969H9 104 aa10.82□□□□□ -0.68
SEH1L-202ENST00000399892 ZNF861PO60384 105 aa10.81□□□□□ -0.68
SEH1L-202ENST00000399892 SMIM6P0DI80 62 aa10.81□□□□□ -0.68
SEH1L-202ENST00000399892 PCLOQ9Y6V0 5065 aa10.81□□□□□ -0.68
SEH1L-202ENST00000399892 TRAV23DV6A0A075B6W5 121 aa10.8□□□□□ -0.68
SEH1L-202ENST00000399892 ETDCA0A1B0GVM5 59 aa10.8□□□□□ -0.68
SEH1L-202ENST00000399892 LOC105371267A0A1B0GV96 52 aa10.79□□□□□ -0.68
SEH1L-202ENST00000399892 A6NDN8 102 aa10.79□□□□□ -0.68
SEH1L-202ENST00000399892 LINC00337Q8N6G1 96 aa10.79□□□□□ -0.68
SEH1L-202ENST00000399892 PRLHP81277 87 aa10.79□□□□□ -0.68
SEH1L-202ENST00000399892 C2orf91Q6ZV80 131 aa10.79□□□□□ -0.68
SEH1L-202ENST00000399892 UQCR10Q9UDW1 63 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms