RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 SPATA3Q8NHX4 192 aa9.56□□□□□ -0.88
APOB-202ENST00000399256 TRBV10-3A0A0K0K1G6 114 aa9.55□□□□□ -0.88
APOB-202ENST00000399256 HAMPP81172 84 aa9.55□□□□□ -0.88
APOB-202ENST00000399256 COX17Q14061 63 aa9.55□□□□□ -0.88
APOB-202ENST00000399256 CD164L2Q6UWJ8 174 aa9.55□□□□□ -0.88
APOB-202ENST00000399256 NDUFC2-KCTD14E9PQ53 114 aa9.54□□□□□ -0.88
APOB-202ENST00000399256 ANGP03950 147 aaKnown RBP9.54□□□□□ -0.88
APOB-202ENST00000399256 FAM236DA0A1B0GTK5 79 aa9.53□□□□□ -0.88
APOB-202ENST00000399256 ZNF561-AS1K7EIQ3 104 aa9.53□□□□□ -0.88
APOB-202ENST00000399256 FAM236CP0DP71 79 aa9.53□□□□□ -0.88
APOB-202ENST00000399256 LINC01547P58512 204 aaPredicted RBP9.53□□□□□ -0.88
APOB-202ENST00000399256 C6orf223Q8N319 242 aa9.53□□□□□ -0.88
APOB-202ENST00000399256 NBEAL2Q6ZNJ1 2754 aa9.53□□□□□ -0.88
APOB-202ENST00000399256 C10orf25Q5T742 122 aa9.52□□□□□ -0.89
APOB-202ENST00000399256 TRAV10A0A0B4J240 114 aa9.52□□□□□ -0.89
APOB-202ENST00000399256 LINC01006Q8NI28 216 aa9.52□□□□□ -0.89
APOB-202ENST00000399256 REG3AQ06141 175 aa9.51□□□□□ -0.89
APOB-202ENST00000399256 Q6ZVQ6 151 aa9.51□□□□□ -0.89
APOB-202ENST00000399256 PRO0255Q9UI72 69 aa9.51□□□□□ -0.89
APOB-202ENST00000399256 MTORP42345 2549 aa9.51□□□□□ -0.89
APOB-202ENST00000399256 IGHV4-28A0A0C4DH34 117 aa9.51□□□□□ -0.89
APOB-202ENST00000399256 UNQ6190/PRO20217Q6UXQ8 127 aa9.51□□□□□ -0.89
APOB-202ENST00000399256 FLNBO75369 2602 aaKnown RBP9.51□□□□□ -0.89
APOB-202ENST00000399256 LOC110117498A0A087WWA1 95 aa9.51□□□□□ -0.89
APOB-202ENST00000399256 Q6ZQY7 126 aa9.51□□□□□ -0.89
APOB-202ENST00000399256 TRAV7A0A075B6U4 112 aa9.5□□□□□ -0.89
APOB-202ENST00000399256 SNURFQ9Y675 71 aa9.5□□□□□ -0.89
APOB-202ENST00000399256 HIVEP2P31629 2446 aa9.49□□□□□ -0.89
APOB-202ENST00000399256 H7BZZ5 65 aa9.49□□□□□ -0.89
APOB-202ENST00000399256 LINC00612Q8N6U2 182 aa9.49□□□□□ -0.89
APOB-202ENST00000399256 LINC00482Q8N8I6 264 aa9.49□□□□□ -0.89
APOB-202ENST00000399256 DEFB4AO15263 64 aa9.48□□□□□ -0.89
APOB-202ENST00000399256 SCXQ7RTU7 201 aa9.48□□□□□ -0.89
APOB-202ENST00000399256 HIVEP1P15822 2718 aa9.48□□□□□ -0.89
APOB-202ENST00000399256 SPAG11BQ08648 103 aa9.48□□□□□ -0.89
APOB-202ENST00000399256 RMI2Q96E14 147 aa9.47□□□□□ -0.89
APOB-202ENST00000399256 WIPF1O43516 503 aa9.47□□□□□ -0.89
APOB-202ENST00000399256 X6R8D5 127 aa9.47□□□□□ -0.89
APOB-202ENST00000399256 BAHCC1Q9P281 2608 aa9.46□□□□□ -0.9
APOB-202ENST00000399256 IGLV6-57P01721 117 aa9.45□□□□□ -0.9
APOB-202ENST00000399256 CYSRT1A8MQ03 144 aa9.45□□□□□ -0.9
APOB-202ENST00000399256 INAFM1C9JVW0 142 aa9.45□□□□□ -0.9
APOB-202ENST00000399256 MUC7Q8TAX7 377 aa9.44□□□□□ -0.9
APOB-202ENST00000399256 SERP1Q9Y6X1 66 aa9.44□□□□□ -0.9
APOB-202ENST00000399256 NSD1Q96L73 2696 aaPredicted RBP9.44□□□□□ -0.9
APOB-202ENST00000399256 XAGE1AQ9HD64 81 aa9.43□□□□□ -0.9
APOB-202ENST00000399256 F8WEM9 126 aa9.43□□□□□ -0.9
APOB-202ENST00000399256 BCE1O60756 84 aa9.43□□□□□ -0.9
APOB-202ENST00000399256 KLKP1Q107X0 134 aa9.43□□□□□ -0.9
APOB-202ENST00000399256 TM2D3Q9BRN9 247 aa9.42□□□□□ -0.9
APOB-202ENST00000399256 CXCL6P80162 114 aa9.42□□□□□ -0.9
APOB-202ENST00000399256 C9orf66Q5T8R8 295 aa9.42□□□□□ -0.9
APOB-202ENST00000399256 DIRC1Q969H9 104 aa9.41□□□□□ -0.9
APOB-202ENST00000399256 EPM2AB3EWF7 344 aa9.4□□□□□ -0.9
APOB-202ENST00000399256 PDE6GP18545 87 aa9.4□□□□□ -0.9
APOB-202ENST00000399256 A0A0J9YWU9 116 aa9.4□□□□□ -0.91
APOB-202ENST00000399256 IGHV4-30-4P0DP06 118 aa9.4□□□□□ -0.91
APOB-202ENST00000399256 C16orf95Q9H693 158 aa9.4□□□□□ -0.91
APOB-202ENST00000399256 KLK12Q9UKR0 248 aa9.39□□□□□ -0.91
APOB-202ENST00000399256 DEFB135Q30KP9 77 aa9.39□□□□□ -0.91
APOB-202ENST00000399256 HTN3P15516 51 aa9.38□□□□□ -0.91
APOB-202ENST00000399256 TRBV7-4A0A0J9YYF1 115 aa9.38□□□□□ -0.91
APOB-202ENST00000399256 ZNF73O43830 326 aaPredicted RBP9.38□□□□□ -0.91
APOB-202ENST00000399256 COX7BP24311 80 aa9.38□□□□□ -0.91
APOB-202ENST00000399256 C6orf48Q9UBA6 75 aa9.38□□□□□ -0.91
APOB-202ENST00000399256 LYRM9A8MSI8 78 aa9.37□□□□□ -0.91
APOB-202ENST00000399256 DAD1P61803 113 aa9.37□□□□□ -0.91
APOB-202ENST00000399256 F8P00451 2351 aa9.37□□□□□ -0.91
APOB-202ENST00000399256 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.36□□□□□ -0.91
APOB-202ENST00000399256 Q8N9L7 120 aa9.36□□□□□ -0.91
APOB-202ENST00000399256 CELA1Q9UNI1 258 aa9.36□□□□□ -0.91
APOB-202ENST00000399256 H3BQ85 93 aa9.35□□□□□ -0.91
APOB-202ENST00000399256 LINC00336Q6ZUF6 198 aa9.35□□□□□ -0.91
APOB-202ENST00000399256 NREPQ16612 68 aa9.34□□□□□ -0.91
APOB-202ENST00000399256 FP248Q71RG6 208 aaPredicted RBP9.34□□□□□ -0.91
APOB-202ENST00000399256 ELOF1P60002 83 aaKnown RBP9.34□□□□□ -0.91
APOB-202ENST00000399256 MIFP14174 115 aa9.33□□□□□ -0.92
APOB-202ENST00000399256 BPY2O14599 106 aa9.32□□□□□ -0.92
APOB-202ENST00000399256 KRTAP10-3P60369 221 aa9.32□□□□□ -0.92
APOB-202ENST00000399256 HIGD2BQ4VC39 106 aa9.32□□□□□ -0.92
APOB-202ENST00000399256 LINC00474Q9P2X8 69 aa9.32□□□□□ -0.92
APOB-202ENST00000399256 LELP1Q5T871 98 aa9.32□□□□□ -0.92
APOB-202ENST00000399256 SMIM26A0A096LP01 95 aa9.31□□□□□ -0.92
APOB-202ENST00000399256 TRBV7-6A0A0J9YX20 115 aa9.31□□□□□ -0.92
APOB-202ENST00000399256 GVQW2A0A096LPI5 108 aaPredicted RBP9.31□□□□□ -0.92
APOB-202ENST00000399256 PRR34Q9NV39 138 aa9.31□□□□□ -0.92
APOB-202ENST00000399256 TMEM254Q8TBM7 123 aa9.3□□□□□ -0.92
APOB-202ENST00000399256 NDUFC1O43677 76 aa9.29□□□□□ -0.92
APOB-202ENST00000399256 VPREB1P12018 145 aa9.29□□□□□ -0.92
APOB-202ENST00000399256 MRAPQ8TCY5 172 aa9.29□□□□□ -0.92
APOB-202ENST00000399256 VWFP04275 2813 aa9.29□□□□□ -0.92
APOB-202ENST00000399256 CAMK2N2Q96S95 79 aa9.28□□□□□ -0.92
APOB-202ENST00000399256 PRO0628Q9UI54 55 aa9.27□□□□□ -0.92
APOB-202ENST00000399256 C3orf84H3BNL1 204 aa9.27□□□□□ -0.93
APOB-202ENST00000399256 IGKV4-1P06312 121 aa9.27□□□□□ -0.93
APOB-202ENST00000399256 LINC00528Q8N1L1 170 aa9.26□□□□□ -0.93
APOB-202ENST00000399256 Q8NAQ8 132 aa9.25□□□□□ -0.93
APOB-202ENST00000399256 M0R378 163 aa9.25□□□□□ -0.93
APOB-202ENST00000399256 Q6ZRU5 148 aa9.25□□□□□ -0.93
APOB-202ENST00000399256 SPART-AS1P0CW21 52 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms