RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 PMCHL2Q9BQD1 86 aa5.24□□□□□ -1.57
BRCC3-205ENST00000399026 HSPB8Q9UJY1 196 aa5.24□□□□□ -1.57
BRCC3-205ENST00000399026 HNRNPA3P51991 378 aaKnown RBP5.23□□□□□ -1.57
BRCC3-205ENST00000399026 C9orf129Q5T035 196 aaKnown RBP5.23□□□□□ -1.57
BRCC3-205ENST00000399026 C7orf33Q8WU49 177 aa5.23□□□□□ -1.57
BRCC3-205ENST00000399026 XAGE1AQ9HD64 81 aa5.23□□□□□ -1.57
BRCC3-205ENST00000399026 TMEM223A0PJW6 202 aa5.22□□□□□ -1.57
BRCC3-205ENST00000399026 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
BRCC3-205ENST00000399026 PHF5AQ7RTV0 110 aaKnown RBP5.22□□□□□ -1.57
BRCC3-205ENST00000399026 ZNF625Q96I27 306 aaPredicted RBP5.22□□□□□ -1.57
BRCC3-205ENST00000399026 PRR3P79522 188 aaKnown RBP5.21□□□□□ -1.58
BRCC3-205ENST00000399026 KRTAP7-1Q8IUC3 87 aa5.21□□□□□ -1.58
BRCC3-205ENST00000399026 MAP1LC3CQ9BXW4 147 aa5.21□□□□□ -1.58
BRCC3-205ENST00000399026 FAT3Q8TDW7 4589 aa5.21□□□□□ -1.58
BRCC3-205ENST00000399026 FLG2Q5D862 2391 aaPredicted RBP5.21□□□□□ -1.58
BRCC3-205ENST00000399026 M0QXV9 152 aa5.2□□□□□ -1.58
BRCC3-205ENST00000399026 DPM2O94777 84 aa5.2□□□□□ -1.58
BRCC3-205ENST00000399026 PLNP26678 52 aa5.2□□□□□ -1.58
BRCC3-205ENST00000399026 PFN2P35080 140 aa5.2□□□□□ -1.58
BRCC3-205ENST00000399026 TSPEAR-AS2P59090 65 aa5.2□□□□□ -1.58
BRCC3-205ENST00000399026 SERTAD4-AS1Q5TG53 156 aa5.2□□□□□ -1.58
BRCC3-205ENST00000399026 SYS1-DBNDD2H3BUS1 97 aa5.19□□□□□ -1.58
BRCC3-205ENST00000399026 IGKCP01834 107 aa5.19□□□□□ -1.58
BRCC3-205ENST00000399026 COA6Q5JTJ3 125 aaKnown RBP5.19□□□□□ -1.58
BRCC3-205ENST00000399026 ERG28Q9UKR5 140 aa5.19□□□□□ -1.58
BRCC3-205ENST00000399026 LRP1Q07954 4544 aaKnown RBP5.19□□□□□ -1.58
BRCC3-205ENST00000399026 A0A0U1RRA0 63 aa5.18□□□□□ -1.58
BRCC3-205ENST00000399026 KRTAP11-1Q8IUC1 163 aa5.18□□□□□ -1.58
BRCC3-205ENST00000399026 C3orf79P0CE67 100 aa5.17□□□□□ -1.58
BRCC3-205ENST00000399026 KRTDAPP60985 99 aa5.17□□□□□ -1.58
BRCC3-205ENST00000399026 HERVK_113P61574 105 aa5.17□□□□□ -1.58
BRCC3-205ENST00000399026 UBE2BP63146 152 aa5.17□□□□□ -1.58
BRCC3-205ENST00000399026 NDUFA12Q9UI09 145 aa5.17□□□□□ -1.58
BRCC3-205ENST00000399026 PSORS1C2Q9UIG4 136 aa5.17□□□□□ -1.58
BRCC3-205ENST00000399026 LEPROTO15243 131 aa5.16□□□□□ -1.58
BRCC3-205ENST00000399026 MEIG1Q5JSS6 88 aa5.16□□□□□ -1.58
BRCC3-205ENST00000399026 C1orf137Q5JT78 98 aa5.16□□□□□ -1.58
BRCC3-205ENST00000399026 LINC01545Q5VT33 79 aa5.16□□□□□ -1.58
BRCC3-205ENST00000399026 SND1-IT1Q9HBX3 110 aa5.16□□□□□ -1.58
BRCC3-205ENST00000399026 J3QQQ9 107 aa5.15□□□□□ -1.59
BRCC3-205ENST00000399026 SMIM13P0DJ93 91 aa5.15□□□□□ -1.59
BRCC3-205ENST00000399026 LINC00158P58513 81 aa5.15□□□□□ -1.59
BRCC3-205ENST00000399026 SFTA2Q6UW10 78 aa5.15□□□□□ -1.59
BRCC3-205ENST00000399026 PET117Q6UWS5 81 aa5.15□□□□□ -1.59
BRCC3-205ENST00000399026 HIST3H2BBQ8N257 126 aa5.15□□□□□ -1.59
BRCC3-205ENST00000399026 Q8NDZ9 215 aa5.15□□□□□ -1.59
BRCC3-205ENST00000399026 PLEKHB2Q96CS7 222 aa5.15□□□□□ -1.59
BRCC3-205ENST00000399026 C22orf24Q9Y442 160 aa5.15□□□□□ -1.59
BRCC3-205ENST00000399026 GAGE10A6NGK3 116 aa5.14□□□□□ -1.59
BRCC3-205ENST00000399026 LGALS3P17931 250 aaKnown RBP5.14□□□□□ -1.59
BRCC3-205ENST00000399026 MRPL55Q7Z7F7 128 aaKnown RBP5.14□□□□□ -1.59
BRCC3-205ENST00000399026 ATOH7Q8N100 152 aa5.14□□□□□ -1.59
BRCC3-205ENST00000399026 NKAPP1Q8N9T2 125 aa5.14□□□□□ -1.59
BRCC3-205ENST00000399026 DMBT1Q9UGM3 2413 aaPredicted RBP5.14□□□□□ -1.59
BRCC3-205ENST00000399026 MYMXA0A1B0GTQ4 84 aa5.13□□□□□ -1.59
BRCC3-205ENST00000399026 E9PLD3 99 aa5.13□□□□□ -1.59
BRCC3-205ENST00000399026 HERV-K104P63124 156 aa5.13□□□□□ -1.59
BRCC3-205ENST00000399026 COX17Q14061 63 aa5.13□□□□□ -1.59
BRCC3-205ENST00000399026 DAND5Q8N907 189 aa5.13□□□□□ -1.59
BRCC3-205ENST00000399026 IGKV2D-26A0A0A0MRZ7 120 aa5.12□□□□□ -1.59
BRCC3-205ENST00000399026 C20orf202A1L168 122 aa5.12□□□□□ -1.59
BRCC3-205ENST00000399026 RPL37AP8A6NKH3 93 aa5.12□□□□□ -1.59
BRCC3-205ENST00000399026 S100A6P06703 90 aa5.12□□□□□ -1.59
BRCC3-205ENST00000399026 VPREB1P12018 145 aa5.12□□□□□ -1.59
BRCC3-205ENST00000399026 S100A2P29034 98 aa5.12□□□□□ -1.59
BRCC3-205ENST00000399026 MIR7-3HGQ8N6C7 128 aa5.12□□□□□ -1.59
BRCC3-205ENST00000399026 HIST1H2BLQ99880 126 aa5.12□□□□□ -1.59
BRCC3-205ENST00000399026 TP73-AS1Q9UF72 201 aa5.12□□□□□ -1.59
BRCC3-205ENST00000399026 HERC1Q15751 4861 aa5.12□□□□□ -1.59
BRCC3-205ENST00000399026 IGLV5-37A0A075B6J1 123 aa5.11□□□□□ -1.59
BRCC3-205ENST00000399026 IGKV2-28A0A075B6P5 120 aa5.11□□□□□ -1.59
BRCC3-205ENST00000399026 NCR3O14931 201 aa5.11□□□□□ -1.59
BRCC3-205ENST00000399026 IGKV2D-28P01615 120 aa5.11□□□□□ -1.59
BRCC3-205ENST00000399026 IGLV7-43P04211 117 aa5.11□□□□□ -1.59
BRCC3-205ENST00000399026 NMUP48645 174 aa5.11□□□□□ -1.59
BRCC3-205ENST00000399026 NPC2P61916 151 aa5.11□□□□□ -1.59
BRCC3-205ENST00000399026 SNRPEP62304 92 aaKnown RBP5.11□□□□□ -1.59
BRCC3-205ENST00000399026 LBHQ53QV2 105 aaPredicted RBP5.11□□□□□ -1.59
BRCC3-205ENST00000399026 LINC00167Q96N53 147 aa5.11□□□□□ -1.59
BRCC3-205ENST00000399026 TTTY13Q9BZ97 58 aa5.11□□□□□ -1.59
BRCC3-205ENST00000399026 A0A0J9YXY3 114 aa5.1□□□□□ -1.59
BRCC3-205ENST00000399026 KRTAP29-1A8MX34 341 aaPredicted RBP5.1□□□□□ -1.59
BRCC3-205ENST00000399026 BOD1L2Q8IYS8 172 aa5.1□□□□□ -1.59
BRCC3-205ENST00000399026 TNXBP22105 4242 aa5.09□□□□□ -1.59
BRCC3-205ENST00000399026 ZNF815PA8K554 130 aa5.09□□□□□ -1.59
BRCC3-205ENST00000399026 SRSF9Q13242 221 aaKnown RBP eCLIP5.09□□□□□ -1.59
BRCC3-205ENST00000399026 SPINK6Q6UWN8 80 aa5.09□□□□□ -1.59
BRCC3-205ENST00000399026 TMEM238C9JI98 176 aa5.08□□□□□ -1.6
BRCC3-205ENST00000399026 OXTP01178 125 aa5.08□□□□□ -1.6
BRCC3-205ENST00000399026 RPL24P83731 157 aaKnown RBP5.08□□□□□ -1.6
BRCC3-205ENST00000399026 C5orf52A6NGY3 159 aa5.07□□□□□ -1.6
BRCC3-205ENST00000399026 LINC00587B1AMM8 73 aa5.07□□□□□ -1.6
BRCC3-205ENST00000399026 BCE1O60756 84 aa5.07□□□□□ -1.6
BRCC3-205ENST00000399026 ADAMTSL4-AS1Q5T5F5 129 aa5.07□□□□□ -1.6
BRCC3-205ENST00000399026 SOSTDC1Q6X4U4 206 aa5.07□□□□□ -1.6
BRCC3-205ENST00000399026 IGLV1-50A0A075B6I6 118 aa5.06□□□□□ -1.6
BRCC3-205ENST00000399026 H0Y9J4 135 aa5.06□□□□□ -1.6
BRCC3-205ENST00000399026 MT1HL1P0DM35 61 aa5.06□□□□□ -1.6
BRCC3-205ENST00000399026 PRLHP81277 87 aa5.06□□□□□ -1.6
BRCC3-205ENST00000399026 REG3GQ6UW15 175 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms