RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 CDH23Q9H251 3354 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 DMBT1Q9UGM3 2413 aaPredicted RBP0.29□□□□□ -2.36
CD47-203ENST00000398258 MAP1AP78559 2803 aaPredicted RBP0.29□□□□□ -2.36
CD47-203ENST00000398258 ZANQ9Y493 2812 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 CADP27708 2225 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 TRBV10-3A0A0K0K1G6 114 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 OOSP1A8MZH6 123 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 HCG22E2RYF7 251 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 ATP6V1G2-DDX39BF2Z307 99 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 APOC4-APOC2K7ER74 178 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 M0R1W7 72 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 NMBP08949 121 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 HTN3P15516 51 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 GCHFRP30047 84 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 PKIAP61925 76 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 SNRPFP62306 86 aaKnown RBP0.29□□□□□ -2.36
CD47-203ENST00000398258 CCL8P80075 99 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 PLGLAQ15195 96 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 DEFB135Q30KP9 77 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 DEFB110Q30KQ9 67 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 MINOS1Q5TGZ0 78 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 RPL13AP3Q6NVV1 102 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 SPINK6Q6UWN8 80 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 DEFB108BQ8NET1 73 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 SNRNP25Q9BV90 132 aaKnown RBP0.29□□□□□ -2.36
CD47-203ENST00000398258 RERGLQ9H628 205 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 PROK2Q9HC23 129 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 SERP1Q9Y6X1 66 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 WNK1Q9H4A3 2382 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 CSMD2Q7Z408 3487 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 HTTP42858 3142 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 ACANP16112 2415 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 PSME4Q14997 1843 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 SPEF2Q9C093 1822 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 RELNP78509 3460 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 FSIP2Q5CZC0 6907 aa0.29□□□□□ -2.36
CD47-203ENST00000398258 UTP20O75691 2785 aaKnown RBP0.28□□□□□ -2.36
CD47-203ENST00000398258 MXRA5Q9NR99 2828 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 DCHS1Q96JQ0 3298 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 DSPP15924 2871 aaKnown RBP0.28□□□□□ -2.36
CD47-203ENST00000398258 LRBAP50851 2863 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 URB1O60287 2271 aaKnown RBP0.28□□□□□ -2.36
CD47-203ENST00000398258 TRAV13-2A0A0B4J235 113 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 TMEM14DPA8MWL7 114 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 IQCF6A8MYZ5 107 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 PHGR1C9JFL3 82 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 H3BUA1 57 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 CYB5AP00167 134 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 TPPP2P59282 170 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 UBE2D3P61077 147 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 SARNPP82979 210 aaKnown RBP0.28□□□□□ -2.36
CD47-203ENST00000398258 C10orf128Q5T292 105 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 Q8N8P6 123 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 USMG5Q96IX5 58 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 LINC01600Q96MT4 127 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 WFDC6Q9BQY6 131 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 XIRP2A4UGR9 3374 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 KIF20BQ96Q89 1820 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 SPTBN1Q01082 2364 aaKnown RBP0.28□□□□□ -2.36
CD47-203ENST00000398258 ASPMQ8IZT6 3477 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 PDCD11Q14690 1871 aaKnown RBP0.28□□□□□ -2.36
CD47-203ENST00000398258 ZZEF1O43149 2961 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 ATG2AQ2TAZ0 1938 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 DMXL1Q9Y485 3027 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 ADGRG4Q8IZF6 3080 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 COL12A1Q99715 3063 aa0.28□□□□□ -2.36
CD47-203ENST00000398258 CENPEQ02224 2701 aa0.28□□□□□ -2.37
CD47-203ENST00000398258 AKAP13Q12802 2813 aa0.28□□□□□ -2.37
CD47-203ENST00000398258 PRRC2CQ9Y520 2896 aaKnown RBP0.27□□□□□ -2.37
CD47-203ENST00000398258 DOPEY2Q9Y3R5 2298 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 CRYBG3Q68DQ2 2970 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 APC2O95996 2303 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 ACACAQ13085 2346 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 FREM2Q5SZK8 3169 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 ITPR2Q14571 2701 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 PKD1L1Q8TDX9 2849 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 NBEAQ8NFP9 2946 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 TRAV1-2A0A0B4J238 106 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 A0A1B0GV90 55 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 C20orf202A1L168 122 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 FAM223BA6NKX1 122 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 MIF4GDA9UHW6 222 aaKnown RBP0.27□□□□□ -2.37
CD47-203ENST00000398258 H3BNG1 76 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 SIX6O95475 246 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 PPP1R17O96001 155 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 SFTA3P0C7M3 94 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 AKAIN1P0CW23 69 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 SMIM6P0DI80 62 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 BTG2P78543 158 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 Q0VG73 95 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 Q6AWC8 147 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 SPAG11AQ6PDA7 123 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 FAM223AQ8IWN6 122 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 TTC9CQ8N5M4 171 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 TMEM203Q969S6 136 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 TTTY10Q9BZA0 68 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 NAA60Q9H7X0 242 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 SCP2D1Q9UJQ7 156 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 APLNQ9ULZ1 77 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 FRYQ5TBA9 3013 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms