RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 Q8N814 137 aa11.03□□□□□ -0.64
CHMP1A-201ENST00000397901 LINC00482Q8N8I6 264 aa11.03□□□□□ -0.64
CHMP1A-201ENST00000397901 RMI2Q96E14 147 aa11.03□□□□□ -0.64
CHMP1A-201ENST00000397901 SNURFQ9Y675 71 aa11.03□□□□□ -0.64
CHMP1A-201ENST00000397901 TRBV7-6A0A0J9YX20 115 aa11.03□□□□□ -0.64
CHMP1A-201ENST00000397901 IGLV1-51P01701 117 aa11.03□□□□□ -0.64
CHMP1A-201ENST00000397901 V9GYY9 64 aa11.03□□□□□ -0.64
CHMP1A-201ENST00000397901 RBM3P98179 157 aaKnown RBP11.02□□□□□ -0.64
CHMP1A-201ENST00000397901 C1orf195Q5TG92 126 aa11.02□□□□□ -0.65
CHMP1A-201ENST00000397901 BRK1Q8WUW1 75 aa11.01□□□□□ -0.65
CHMP1A-201ENST00000397901 A0A096LPF7 62 aa11.01□□□□□ -0.65
CHMP1A-201ENST00000397901 GYPEP15421 78 aa11.01□□□□□ -0.65
CHMP1A-201ENST00000397901 SEC61GP60059 68 aa11□□□□□ -0.65
CHMP1A-201ENST00000397901 LINC00474Q9P2X8 69 aa11□□□□□ -0.65
CHMP1A-201ENST00000397901 NBEAL2Q6ZNJ1 2754 aa11□□□□□ -0.65
CHMP1A-201ENST00000397901 TRAV10A0A0B4J240 114 aa10.99□□□□□ -0.65
CHMP1A-201ENST00000397901 PRR3P79522 188 aaKnown RBP10.99□□□□□ -0.65
CHMP1A-201ENST00000397901 LINC01547P58512 204 aaPredicted RBP10.98□□□□□ -0.65
CHMP1A-201ENST00000397901 SMR3AQ99954 134 aa10.98□□□□□ -0.65
CHMP1A-201ENST00000397901 FLNBO75369 2602 aaKnown RBP10.98□□□□□ -0.65
CHMP1A-201ENST00000397901 HECTD1Q9ULT8 2610 aa10.97□□□□□ -0.65
CHMP1A-201ENST00000397901 Q6ZQT0 140 aa10.97□□□□□ -0.65
CHMP1A-201ENST00000397901 A0A0U1RQV1 116 aa10.96□□□□□ -0.66
CHMP1A-201ENST00000397901 HAMPP81172 84 aa10.95□□□□□ -0.66
CHMP1A-201ENST00000397901 Q8IZM0 81 aa10.95□□□□□ -0.66
CHMP1A-201ENST00000397901 LOC110117498A0A087WWA1 95 aa10.95□□□□□ -0.66
CHMP1A-201ENST00000397901 NANOS2P60321 138 aaKnown RBP10.94□□□□□ -0.66
CHMP1A-201ENST00000397901 CXCL6P80162 114 aa10.94□□□□□ -0.66
CHMP1A-201ENST00000397901 Q6ZVQ6 151 aa10.94□□□□□ -0.66
CHMP1A-201ENST00000397901 HIVEP2P31629 2446 aa10.93□□□□□ -0.66
CHMP1A-201ENST00000397901 OTOGQ6ZRI0 2925 aa10.93□□□□□ -0.66
CHMP1A-201ENST00000397901 IGLV10-54A0A075B6I4 117 aa10.93□□□□□ -0.66
CHMP1A-201ENST00000397901 MIFP14174 115 aa10.93□□□□□ -0.66
CHMP1A-201ENST00000397901 TRBV7-4A0A0J9YYF1 115 aa10.92□□□□□ -0.66
CHMP1A-201ENST00000397901 A0A1B0GUV1 79 aa10.92□□□□□ -0.66
CHMP1A-201ENST00000397901 KRTAP10-3P60369 221 aa10.92□□□□□ -0.66
CHMP1A-201ENST00000397901 C9orf116Q5BN46 136 aaPredicted RBP10.92□□□□□ -0.66
CHMP1A-201ENST00000397901 LINC00269Q8N2A0 174 aa10.92□□□□□ -0.66
CHMP1A-201ENST00000397901 Q8N3U1 123 aa10.92□□□□□ -0.66
CHMP1A-201ENST00000397901 ZNF561-AS1K7EIQ3 104 aa10.91□□□□□ -0.66
CHMP1A-201ENST00000397901 LINC00612Q8N6U2 182 aa10.9□□□□□ -0.67
CHMP1A-201ENST00000397901 TM2D3Q9BRN9 247 aa10.9□□□□□ -0.67
CHMP1A-201ENST00000397901 PRO0255Q9UI72 69 aa10.9□□□□□ -0.67
CHMP1A-201ENST00000397901 C6orf223Q8N319 242 aa10.89□□□□□ -0.67
CHMP1A-201ENST00000397901 NOTCH2Q04721 2471 aa10.89□□□□□ -0.67
CHMP1A-201ENST00000397901 KIAA0087Q14695 138 aa10.89□□□□□ -0.67
CHMP1A-201ENST00000397901 DEFB4AO15263 64 aa10.88□□□□□ -0.67
CHMP1A-201ENST00000397901 X6R8D5 127 aa10.88□□□□□ -0.67
CHMP1A-201ENST00000397901 CHCHD10Q8WYQ3 142 aaPredicted RBP10.87□□□□□ -0.67
CHMP1A-201ENST00000397901 BAHCC1Q9P281 2608 aa10.87□□□□□ -0.67
CHMP1A-201ENST00000397901 PDE6GP18545 87 aa10.87□□□□□ -0.67
CHMP1A-201ENST00000397901 LAMTOR3Q9UHA4 124 aa10.87□□□□□ -0.67
CHMP1A-201ENST00000397901 M0R2N4 97 aa10.86□□□□□ -0.67
CHMP1A-201ENST00000397901 ANGP03950 147 aaKnown RBP10.86□□□□□ -0.67
CHMP1A-201ENST00000397901 Q8NDZ9 215 aa10.86□□□□□ -0.67
CHMP1A-201ENST00000397901 ERC2-IT1O76042 136 aa10.86□□□□□ -0.67
CHMP1A-201ENST00000397901 CD164L2Q6UWJ8 174 aa10.86□□□□□ -0.67
CHMP1A-201ENST00000397901 LINC00575Q6W349 94 aa10.86□□□□□ -0.67
CHMP1A-201ENST00000397901 MPLKIPQ8TAP9 179 aa10.85□□□□□ -0.67
CHMP1A-201ENST00000397901 TMEM254Q8TBM7 123 aa10.85□□□□□ -0.67
CHMP1A-201ENST00000397901 NREPQ16612 68 aa10.85□□□□□ -0.67
CHMP1A-201ENST00000397901 FAM229BQ4G0N7 80 aa10.85□□□□□ -0.67
CHMP1A-201ENST00000397901 C6orf99Q4VX62 202 aa10.85□□□□□ -0.67
CHMP1A-201ENST00000397901 REG3AQ06141 175 aa10.84□□□□□ -0.67
CHMP1A-201ENST00000397901 C9orf66Q5T8R8 295 aa10.84□□□□□ -0.67
CHMP1A-201ENST00000397901 NSD1Q96L73 2696 aaPredicted RBP10.83□□□□□ -0.68
CHMP1A-201ENST00000397901 COX17Q14061 63 aa10.83□□□□□ -0.68
CHMP1A-201ENST00000397901 VWFP04275 2813 aa10.82□□□□□ -0.68
CHMP1A-201ENST00000397901 INAFM1C9JVW0 142 aa10.81□□□□□ -0.68
CHMP1A-201ENST00000397901 ESRGQ1W209 222 aa10.81□□□□□ -0.68
CHMP1A-201ENST00000397901 DEFB135Q30KP9 77 aa10.81□□□□□ -0.68
CHMP1A-201ENST00000397901 C10orf25Q5T742 122 aa10.81□□□□□ -0.68
CHMP1A-201ENST00000397901 H3BQ85 93 aa10.8□□□□□ -0.68
CHMP1A-201ENST00000397901 BPY2O14599 106 aa10.8□□□□□ -0.68
CHMP1A-201ENST00000397901 IGHV4-28A0A0C4DH34 117 aa10.79□□□□□ -0.68
CHMP1A-201ENST00000397901 UNQ6190/PRO20217Q6UXQ8 127 aa10.79□□□□□ -0.68
CHMP1A-201ENST00000397901 SPATA3Q8NHX4 192 aa10.79□□□□□ -0.68
CHMP1A-201ENST00000397901 PRYO14603 147 aa10.78□□□□□ -0.68
CHMP1A-201ENST00000397901 LYRM9A8MSI8 78 aa10.77□□□□□ -0.69
CHMP1A-201ENST00000397901 FUSP35637 526 aaKnown RBP eCLIP10.77□□□□□ -0.69
CHMP1A-201ENST00000397901 SPAG11BQ08648 103 aa10.77□□□□□ -0.69
CHMP1A-201ENST00000397901 SCXQ7RTU7 201 aa10.77□□□□□ -0.69
CHMP1A-201ENST00000397901 MUC7Q8TAX7 377 aa10.77□□□□□ -0.69
CHMP1A-201ENST00000397901 TENM1Q9UKZ4 2725 aa10.76□□□□□ -0.69
CHMP1A-201ENST00000397901 HIVEP1P15822 2718 aa10.76□□□□□ -0.69
CHMP1A-201ENST00000397901 HTN3P15516 51 aa10.76□□□□□ -0.69
CHMP1A-201ENST00000397901 DAD1P61803 113 aa10.76□□□□□ -0.69
CHMP1A-201ENST00000397901 PRR15Q8IV56 129 aa10.75□□□□□ -0.69
CHMP1A-201ENST00000397901 CELA1Q9UNI1 258 aa10.75□□□□□ -0.69
CHMP1A-201ENST00000397901 Q6ZTC4 211 aa10.74□□□□□ -0.69
CHMP1A-201ENST00000397901 CYSRT1A8MQ03 144 aa10.74□□□□□ -0.69
CHMP1A-201ENST00000397901 Q6ZQY7 126 aa10.73□□□□□ -0.69
CHMP1A-201ENST00000397901 PMAIP1Q13794 54 aa10.72□□□□□ -0.69
CHMP1A-201ENST00000397901 KLK12Q9UKR0 248 aa10.72□□□□□ -0.69
CHMP1A-201ENST00000397901 OCR1Q9BZK8 76 aa10.7□□□□□ -0.7
CHMP1A-201ENST00000397901 XAGE1AQ9HD64 81 aa10.69□□□□□ -0.7
CHMP1A-201ENST00000397901 IGLV6-57P01721 117 aa10.69□□□□□ -0.7
CHMP1A-201ENST00000397901 TRRAPQ9Y4A5 3859 aa10.69□□□□□ -0.7
CHMP1A-201ENST00000397901 Q6ZRU5 148 aa10.68□□□□□ -0.7
CHMP1A-201ENST00000397901 A0A0J9YWU9 116 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms