RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SS18L2Q9UHA2 77 aa4.03□□□□□ -1.76
PTPRD-206ENST00000397617 B9D2Q9BPU9 175 aa4.03□□□□□ -1.76
PTPRD-206ENST00000397617 NREPQ16612 68 aa4.02□□□□□ -1.77
PTPRD-206ENST00000397617 BRK1Q8WUW1 75 aa4.02□□□□□ -1.77
PTPRD-206ENST00000397617 UBE2AP49459 152 aa4.02□□□□□ -1.77
PTPRD-206ENST00000397617 IGHV3-73A0A0B4J1V6 119 aa4.02□□□□□ -1.77
PTPRD-206ENST00000397617 RBM3P98179 157 aaKnown RBP4.02□□□□□ -1.77
PTPRD-206ENST00000397617 CHCHD10Q8WYQ3 142 aaPredicted RBP4.01□□□□□ -1.77
PTPRD-206ENST00000397617 SERP1Q9Y6X1 66 aa4.01□□□□□ -1.77
PTPRD-206ENST00000397617 SMIM26A0A096LP01 95 aa4.01□□□□□ -1.77
PTPRD-206ENST00000397617 TMEM256-PLSCR3K7ERE1 68 aa4.01□□□□□ -1.77
PTPRD-206ENST00000397617 SDIM1Q6ZPB5 146 aa4.01□□□□□ -1.77
PTPRD-206ENST00000397617 SPAG11BQ08648 103 aa4.01□□□□□ -1.77
PTPRD-206ENST00000397617 C11orf45Q8TAV5 145 aa4.01□□□□□ -1.77
PTPRD-206ENST00000397617 HIGD2BQ4VC39 106 aa4.01□□□□□ -1.77
PTPRD-206ENST00000397617 LYPD5Q6UWN5 251 aa4.01□□□□□ -1.77
PTPRD-206ENST00000397617 ZNF706Q9Y5V0 76 aaPredicted RBP4.01□□□□□ -1.77
PTPRD-206ENST00000397617 RPL37AP8A6NKH3 93 aa4□□□□□ -1.77
PTPRD-206ENST00000397617 WFDC10AQ9H1F0 79 aa4□□□□□ -1.77
PTPRD-206ENST00000397617 LINC00167Q96N53 147 aa4□□□□□ -1.77
PTPRD-206ENST00000397617 IGLV5-37A0A075B6J1 123 aa4□□□□□ -1.77
PTPRD-206ENST00000397617 NTN5Q8WTR8 489 aaPredicted RBP4□□□□□ -1.77
PTPRD-206ENST00000397617 B5MCH6 92 aa4□□□□□ -1.77
PTPRD-206ENST00000397617 MIR7-3HGQ8N6C7 128 aa4□□□□□ -1.77
PTPRD-206ENST00000397617 SPTSSBQ8NFR3 76 aa4□□□□□ -1.77
PTPRD-206ENST00000397617 Q9UF83 564 aa3.99□□□□□ -1.77
PTPRD-206ENST00000397617 TRIAP1O43715 76 aa3.99□□□□□ -1.77
PTPRD-206ENST00000397617 IGLV4-60A0A075B6I1 120 aa3.99□□□□□ -1.77
PTPRD-206ENST00000397617 FAM236DA0A1B0GTK5 79 aa3.99□□□□□ -1.77
PTPRD-206ENST00000397617 FAM236CP0DP71 79 aa3.99□□□□□ -1.77
PTPRD-206ENST00000397617 ADAMTSL4-AS1Q5T5F5 129 aa3.99□□□□□ -1.77
PTPRD-206ENST00000397617 SMR3AQ99954 134 aa3.99□□□□□ -1.77
PTPRD-206ENST00000397617 TRBV10-3A0A0K0K1G6 114 aa3.99□□□□□ -1.77
PTPRD-206ENST00000397617 C7orf33Q8WU49 177 aa3.99□□□□□ -1.77
PTPRD-206ENST00000397617 SERP2Q8N6R1 65 aa3.99□□□□□ -1.77
PTPRD-206ENST00000397617 DEFB131BA0A096LNP1 70 aa3.98□□□□□ -1.77
PTPRD-206ENST00000397617 DIRC1Q969H9 104 aa3.98□□□□□ -1.77
PTPRD-206ENST00000397617 OBSCN-AS1Q96MR7 158 aa3.98□□□□□ -1.77
PTPRD-206ENST00000397617 TCL1BO95988 128 aa3.98□□□□□ -1.77
PTPRD-206ENST00000397617 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.98□□□□□ -1.77
PTPRD-206ENST00000397617 CASC2Q6XLA1 102 aa3.98□□□□□ -1.77
PTPRD-206ENST00000397617 IGLV6-57P01721 117 aa3.98□□□□□ -1.77
PTPRD-206ENST00000397617 BAALC-AS2P0C853 105 aa3.98□□□□□ -1.77
PTPRD-206ENST00000397617 XCL1P47992 114 aa3.98□□□□□ -1.77
PTPRD-206ENST00000397617 CEMP1Q6PRD7 247 aaPredicted RBP3.98□□□□□ -1.77
PTPRD-206ENST00000397617 LINC00474Q9P2X8 69 aa3.97□□□□□ -1.77
PTPRD-206ENST00000397617 COX7CP15954 63 aa3.97□□□□□ -1.77
PTPRD-206ENST00000397617 PRO0628Q9UI54 55 aa3.97□□□□□ -1.77
PTPRD-206ENST00000397617 RPL18AQ02543 176 aaKnown RBP3.97□□□□□ -1.77
PTPRD-206ENST00000397617 LINC00269Q8N2A0 174 aa3.97□□□□□ -1.77
PTPRD-206ENST00000397617 FBN3Q75N90 2809 aa3.97□□□□□ -1.77
PTPRD-206ENST00000397617 C1orf195Q5TG92 126 aa3.97□□□□□ -1.77
PTPRD-206ENST00000397617 NUPR2A6NF83 97 aa3.97□□□□□ -1.77
PTPRD-206ENST00000397617 CNBPP62633 177 aaKnown RBP3.97□□□□□ -1.77
PTPRD-206ENST00000397617 USP17L23D6RBM5 183 aa3.96□□□□□ -1.77
PTPRD-206ENST00000397617 K7ERJ3 54 aa3.96□□□□□ -1.78
PTPRD-206ENST00000397617 LINC00337Q8N6G1 96 aa3.96□□□□□ -1.78
PTPRD-206ENST00000397617 FAM236AA0A1B0GUQ0 79 aa3.96□□□□□ -1.78
PTPRD-206ENST00000397617 FAM236BA0A1B0GV22 79 aa3.96□□□□□ -1.78
PTPRD-206ENST00000397617 CXCL6P80162 114 aa3.96□□□□□ -1.78
PTPRD-206ENST00000397617 SOSTDC1Q6X4U4 206 aa3.96□□□□□ -1.78
PTPRD-206ENST00000397617 SYCNQ0VAF6 134 aa3.96□□□□□ -1.78
PTPRD-206ENST00000397617 KRTAP26-1Q6PEX3 210 aa3.96□□□□□ -1.78
PTPRD-206ENST00000397617 M0R378 163 aa3.95□□□□□ -1.78
PTPRD-206ENST00000397617 COX6A2Q02221 97 aa3.95□□□□□ -1.78
PTPRD-206ENST00000397617 C5orf38Q86SI9 138 aa3.95□□□□□ -1.78
PTPRD-206ENST00000397617 WFDC2Q14508 124 aa3.95□□□□□ -1.78
PTPRD-206ENST00000397617 Q9HAA7 133 aa3.95□□□□□ -1.78
PTPRD-206ENST00000397617 KLK12Q9UKR0 248 aa3.95□□□□□ -1.78
PTPRD-206ENST00000397617 FLG2Q5D862 2391 aaPredicted RBP3.95□□□□□ -1.78
PTPRD-206ENST00000397617 COX7BP24311 80 aa3.95□□□□□ -1.78
PTPRD-206ENST00000397617 LOC107984640A0A0U1RRK4 108 aa3.94□□□□□ -1.78
PTPRD-206ENST00000397617 H0Y9J4 135 aa3.94□□□□□ -1.78
PTPRD-206ENST00000397617 IGKV2-28A0A075B6P5 120 aa3.94□□□□□ -1.78
PTPRD-206ENST00000397617 CYSRT1A8MQ03 144 aa3.94□□□□□ -1.78
PTPRD-206ENST00000397617 IGKV2D-28P01615 120 aa3.94□□□□□ -1.78
PTPRD-206ENST00000397617 ENHOQ6UWT2 76 aa3.94□□□□□ -1.78
PTPRD-206ENST00000397617 Q6ZTC4 211 aa3.94□□□□□ -1.78
PTPRD-206ENST00000397617 LINC00526Q96FQ7 95 aa3.94□□□□□ -1.78
PTPRD-206ENST00000397617 C14orf132Q9NPU4 83 aa3.94□□□□□ -1.78
PTPRD-206ENST00000397617 RPL37AP61513 92 aaKnown RBP3.94□□□□□ -1.78
PTPRD-206ENST00000397617 TRBV7-7A0A0K0K1E9 115 aa3.94□□□□□ -1.78
PTPRD-206ENST00000397617 OXLD1Q5BKU9 147 aa3.94□□□□□ -1.78
PTPRD-206ENST00000397617 PRB4P10163 310 aaPredicted RBP3.94□□□□□ -1.78
PTPRD-206ENST00000397617 IGLV10-54A0A075B6I4 117 aa3.94□□□□□ -1.78
PTPRD-206ENST00000397617 SMCPP49901 116 aaPredicted RBP3.94□□□□□ -1.78
PTPRD-206ENST00000397617 DHRS4-AS1Q9P1J3 65 aa3.93□□□□□ -1.78
PTPRD-206ENST00000397617 KCNQ1DNQ9H478 68 aa3.93□□□□□ -1.78
PTPRD-206ENST00000397617 BPY2O14599 106 aa3.93□□□□□ -1.78
PTPRD-206ENST00000397617 PRYO14603 147 aa3.93□□□□□ -1.78
PTPRD-206ENST00000397617 SPRR1AP35321 89 aa3.93□□□□□ -1.78
PTPRD-206ENST00000397617 NAA38Q9BRA0 125 aaKnown RBP3.93□□□□□ -1.78
PTPRD-206ENST00000397617 LOC110117498A0A087WWA1 95 aa3.93□□□□□ -1.78
PTPRD-206ENST00000397617 EIF4EBP3O60516 100 aaPredicted RBP3.93□□□□□ -1.78
PTPRD-206ENST00000397617 Q6JHZ5 121 aa3.93□□□□□ -1.78
PTPRD-206ENST00000397617 TRAV7A0A075B6U4 112 aa3.92□□□□□ -1.78
PTPRD-206ENST00000397617 PRM2P04554 102 aa3.92□□□□□ -1.78
PTPRD-206ENST00000397617 K7EIL1 84 aa3.92□□□□□ -1.78
PTPRD-206ENST00000397617 CELA1Q9UNI1 258 aa3.92□□□□□ -1.78
PTPRD-206ENST00000397617 IGKV4-1P06312 121 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms