RNA–Protein interactions for RNA: ENST00000397238.6

AGAP3-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-202ENST00000397238 Q6ZQY7 126 aa13.55□□□□□ -0.24
AGAP3-202ENST00000397238 REG3AQ06141 175 aa13.55□□□□□ -0.24
AGAP3-202ENST00000397238 LINC00575Q6W349 94 aa13.55□□□□□ -0.24
AGAP3-202ENST00000397238 ATP5EP2Q5VTU8 51 aa13.54□□□□□ -0.24
AGAP3-202ENST00000397238 TRAV10A0A0B4J240 114 aa13.54□□□□□ -0.24
AGAP3-202ENST00000397238 CMC4P56277 68 aaPredicted RBP13.54□□□□□ -0.24
AGAP3-202ENST00000397238 CD164L2Q6UWJ8 174 aa13.54□□□□□ -0.24
AGAP3-202ENST00000397238 J3QKU1 62 aa13.53□□□□□ -0.24
AGAP3-202ENST00000397238 HTN3P15516 51 aa13.53□□□□□ -0.24
AGAP3-202ENST00000397238 PRO0255Q9UI72 69 aa13.53□□□□□ -0.24
AGAP3-202ENST00000397238 A0A1B0GUV1 79 aa13.53□□□□□ -0.24
AGAP3-202ENST00000397238 Q6ZQT0 140 aa13.52□□□□□ -0.24
AGAP3-202ENST00000397238 XAGE1AQ9HD64 81 aa13.52□□□□□ -0.24
AGAP3-202ENST00000397238 LINC01547P58512 204 aaPredicted RBP13.52□□□□□ -0.25
AGAP3-202ENST00000397238 NDUFC2O95298 119 aa13.51□□□□□ -0.25
AGAP3-202ENST00000397238 FAM236DA0A1B0GTK5 79 aa13.51□□□□□ -0.25
AGAP3-202ENST00000397238 FAM236CP0DP71 79 aa13.51□□□□□ -0.25
AGAP3-202ENST00000397238 LINC00482Q8N8I6 264 aa13.51□□□□□ -0.25
AGAP3-202ENST00000397238 Q5XG85 94 aa13.5□□□□□ -0.25
AGAP3-202ENST00000397238 Q6ZVQ6 151 aa13.5□□□□□ -0.25
AGAP3-202ENST00000397238 RMI2Q96E14 147 aa13.49□□□□□ -0.25
AGAP3-202ENST00000397238 KRTAP1-1Q07627 177 aa13.49□□□□□ -0.25
AGAP3-202ENST00000397238 SPAG11BQ08648 103 aa13.49□□□□□ -0.25
AGAP3-202ENST00000397238 ZNF561-AS1K7EIQ3 104 aa13.48□□□□□ -0.25
AGAP3-202ENST00000397238 COX17Q14061 63 aa13.48□□□□□ -0.25
AGAP3-202ENST00000397238 LYPD5Q6UWN5 251 aa13.47□□□□□ -0.25
AGAP3-202ENST00000397238 CYSRT1A8MQ03 144 aa13.47□□□□□ -0.25
AGAP3-202ENST00000397238 VWFP04275 2813 aa13.46□□□□□ -0.26
AGAP3-202ENST00000397238 ATRQ13535 2644 aa13.46□□□□□ -0.26
AGAP3-202ENST00000397238 DEFB135Q30KP9 77 aa13.45□□□□□ -0.26
AGAP3-202ENST00000397238 TRBV10-3A0A0K0K1G6 114 aa13.44□□□□□ -0.26
AGAP3-202ENST00000397238 KLK12Q9UKR0 248 aa13.44□□□□□ -0.26
AGAP3-202ENST00000397238 X6R8D5 127 aa13.43□□□□□ -0.26
AGAP3-202ENST00000397238 OTOGQ6ZRI0 2925 aa13.43□□□□□ -0.26
AGAP3-202ENST00000397238 H7BZZ5 65 aa13.43□□□□□ -0.26
AGAP3-202ENST00000397238 TRAV7A0A075B6U4 112 aa13.42□□□□□ -0.26
AGAP3-202ENST00000397238 FLNBO75369 2602 aaKnown RBP13.42□□□□□ -0.26
AGAP3-202ENST00000397238 F8WEM9 126 aa13.41□□□□□ -0.26
AGAP3-202ENST00000397238 IGHV4-28A0A0C4DH34 117 aa13.4□□□□□ -0.26
AGAP3-202ENST00000397238 TM2D3Q9BRN9 247 aa13.4□□□□□ -0.26
AGAP3-202ENST00000397238 Q8N9L7 120 aa13.39□□□□□ -0.27
AGAP3-202ENST00000397238 MUC7Q8TAX7 377 aa13.39□□□□□ -0.27
AGAP3-202ENST00000397238 DAD1P61803 113 aa13.38□□□□□ -0.27
AGAP3-202ENST00000397238 LOC110117498A0A087WWA1 95 aa13.38□□□□□ -0.27
AGAP3-202ENST00000397238 NDUFC2-KCTD14E9PQ53 114 aa13.38□□□□□ -0.27
AGAP3-202ENST00000397238 DIRC1Q969H9 104 aa13.37□□□□□ -0.27
AGAP3-202ENST00000397238 ANK3Q12955 4377 aaKnown RBP13.36□□□□□ -0.27
AGAP3-202ENST00000397238 HIGD2BQ4VC39 106 aa13.36□□□□□ -0.27
AGAP3-202ENST00000397238 LINC00612Q8N6U2 182 aa13.35□□□□□ -0.27
AGAP3-202ENST00000397238 IGLV6-57P01721 117 aa13.35□□□□□ -0.27
AGAP3-202ENST00000397238 CELA1Q9UNI1 258 aa13.34□□□□□ -0.27
AGAP3-202ENST00000397238 TENM1Q9UKZ4 2725 aa13.33□□□□□ -0.28
AGAP3-202ENST00000397238 KMT2BQ9UMN6 2715 aaPredicted RBP13.32□□□□□ -0.28
AGAP3-202ENST00000397238 ZNF73O43830 326 aaPredicted RBP13.32□□□□□ -0.28
AGAP3-202ENST00000397238 SERP1Q9Y6X1 66 aa13.32□□□□□ -0.28
AGAP3-202ENST00000397238 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.32□□□□□ -0.28
AGAP3-202ENST00000397238 COX7BP24311 80 aa13.32□□□□□ -0.28
AGAP3-202ENST00000397238 C6orf48Q9UBA6 75 aa13.32□□□□□ -0.28
AGAP3-202ENST00000397238 INAFM1C9JVW0 142 aa13.3□□□□□ -0.28
AGAP3-202ENST00000397238 KRTAP10-3P60369 221 aa13.3□□□□□ -0.28
AGAP3-202ENST00000397238 HIVEP1P15822 2718 aa13.29□□□□□ -0.28
AGAP3-202ENST00000397238 C16orf95Q9H693 158 aa13.29□□□□□ -0.28
AGAP3-202ENST00000397238 LINC00474Q9P2X8 69 aa13.29□□□□□ -0.28
AGAP3-202ENST00000397238 KLKP1Q107X0 134 aa13.28□□□□□ -0.28
AGAP3-202ENST00000397238 LINC00336Q6ZUF6 198 aa13.28□□□□□ -0.28
AGAP3-202ENST00000397238 NSD1Q96L73 2696 aaPredicted RBP13.28□□□□□ -0.28
AGAP3-202ENST00000397238 DEFB105AQ8NG35 78 aa13.28□□□□□ -0.28
AGAP3-202ENST00000397238 CXCL6P80162 114 aa13.27□□□□□ -0.28
AGAP3-202ENST00000397238 A0A0J9YWU9 116 aa13.27□□□□□ -0.29
AGAP3-202ENST00000397238 LYRM9A8MSI8 78 aa13.27□□□□□ -0.29
AGAP3-202ENST00000397238 IGHV4-30-4P0DP06 118 aa13.27□□□□□ -0.29
AGAP3-202ENST00000397238 C3orf84H3BNL1 204 aa13.26□□□□□ -0.29
AGAP3-202ENST00000397238 PDE6GP18545 87 aa13.26□□□□□ -0.29
AGAP3-202ENST00000397238 NREPQ16612 68 aa13.26□□□□□ -0.29
AGAP3-202ENST00000397238 CAMK2N2Q96S95 79 aa13.25□□□□□ -0.29
AGAP3-202ENST00000397238 BPY2O14599 106 aa13.24□□□□□ -0.29
AGAP3-202ENST00000397238 WIPF1O43516 503 aa13.24□□□□□ -0.29
AGAP3-202ENST00000397238 MIFP14174 115 aa13.24□□□□□ -0.29
AGAP3-202ENST00000397238 TEP1Q99973 2627 aaKnown RBP13.24□□□□□ -0.29
AGAP3-202ENST00000397238 C9orf66Q5T8R8 295 aa13.24□□□□□ -0.29
AGAP3-202ENST00000397238 TRBV7-4A0A0J9YYF1 115 aa13.23□□□□□ -0.29
AGAP3-202ENST00000397238 F8P00451 2351 aa13.22□□□□□ -0.29
AGAP3-202ENST00000397238 FP248Q71RG6 208 aaPredicted RBP13.22□□□□□ -0.29
AGAP3-202ENST00000397238 TRBV7-6A0A0J9YX20 115 aa13.21□□□□□ -0.29
AGAP3-202ENST00000397238 LELP1Q5T871 98 aa13.21□□□□□ -0.29
AGAP3-202ENST00000397238 MPLKIPQ8TAP9 179 aa13.2□□□□□ -0.3
AGAP3-202ENST00000397238 ELOF1P60002 83 aaKnown RBP13.2□□□□□ -0.3
AGAP3-202ENST00000397238 TMEM254Q8TBM7 123 aa13.2□□□□□ -0.3
AGAP3-202ENST00000397238 BCE1O60756 84 aa13.18□□□□□ -0.3
AGAP3-202ENST00000397238 C1orf43Q9BWL3 253 aa13.18□□□□□ -0.3
AGAP3-202ENST00000397238 PKD1L1Q8TDX9 2849 aa13.18□□□□□ -0.3
AGAP3-202ENST00000397238 TRRAPQ9Y4A5 3859 aa13.18□□□□□ -0.3
AGAP3-202ENST00000397238 SMIM26A0A096LP01 95 aa13.17□□□□□ -0.3
AGAP3-202ENST00000397238 Q6ZRU5 148 aa13.17□□□□□ -0.3
AGAP3-202ENST00000397238 PKIGQ9Y2B9 76 aa13.16□□□□□ -0.3
AGAP3-202ENST00000397238 SPART-AS1P0CW21 52 aa13.15□□□□□ -0.3
AGAP3-202ENST00000397238 VPREB1P12018 145 aa13.15□□□□□ -0.3
AGAP3-202ENST00000397238 WFDC10BQ8IUB3 73 aa13.15□□□□□ -0.3
AGAP3-202ENST00000397238 PRR34Q9NV39 138 aa13.15□□□□□ -0.31
AGAP3-202ENST00000397238 EPM2AB3EWF7 344 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms