RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 ANGP03950 147 aaKnown RBP9.41□□□□□ -0.9
NUP98-204ENST00000397004 DSCR8Q96T75 97 aa9.4□□□□□ -0.9
NUP98-204ENST00000397004 SMR3AQ99954 134 aa9.4□□□□□ -0.9
NUP98-204ENST00000397004 CELA1Q9UNI1 258 aa9.4□□□□□ -0.9
NUP98-204ENST00000397004 TMEM256-PLSCR3K7ERE1 68 aa9.4□□□□□ -0.9
NUP98-204ENST00000397004 DPH3Q96FX2 82 aa9.4□□□□□ -0.9
NUP98-204ENST00000397004 COX17Q14061 63 aa9.39□□□□□ -0.91
NUP98-204ENST00000397004 Q6ZQT0 140 aa9.39□□□□□ -0.91
NUP98-204ENST00000397004 JMJD7-PLA2G4BH0Y9G9 81 aa9.38□□□□□ -0.91
NUP98-204ENST00000397004 FASNP49327 2511 aaKnown RBP9.38□□□□□ -0.91
NUP98-204ENST00000397004 DEFB135Q30KP9 77 aa9.37□□□□□ -0.91
NUP98-204ENST00000397004 J3KT08 172 aa9.37□□□□□ -0.91
NUP98-204ENST00000397004 CYSRT1A8MQ03 144 aa9.36□□□□□ -0.91
NUP98-204ENST00000397004 GHRHP01286 108 aa9.36□□□□□ -0.91
NUP98-204ENST00000397004 IGLV6-57P01721 117 aa9.36□□□□□ -0.91
NUP98-204ENST00000397004 TEP1Q99973 2627 aaKnown RBP9.34□□□□□ -0.91
NUP98-204ENST00000397004 RPS28P62857 69 aaKnown RBP9.34□□□□□ -0.91
NUP98-204ENST00000397004 XAGE1AQ9HD64 81 aa9.33□□□□□ -0.92
NUP98-204ENST00000397004 S100A7L2Q5SY68 101 aa9.33□□□□□ -0.92
NUP98-204ENST00000397004 Q6ZQY7 126 aa9.33□□□□□ -0.92
NUP98-204ENST00000397004 A0A0J9YWU9 116 aa9.32□□□□□ -0.92
NUP98-204ENST00000397004 IGHV4-30-4P0DP06 118 aa9.32□□□□□ -0.92
NUP98-204ENST00000397004 TMEM258P61165 79 aa9.32□□□□□ -0.92
NUP98-204ENST00000397004 SPAG11BQ08648 103 aa9.32□□□□□ -0.92
NUP98-204ENST00000397004 TRAV10A0A0B4J240 114 aa9.32□□□□□ -0.92
NUP98-204ENST00000397004 ATRQ13535 2644 aa9.32□□□□□ -0.92
NUP98-204ENST00000397004 HECTD1Q9ULT8 2610 aa9.32□□□□□ -0.92
NUP98-204ENST00000397004 TRBV10-3A0A0K0K1G6 114 aa9.32□□□□□ -0.92
NUP98-204ENST00000397004 C6orf48Q9UBA6 75 aa9.32□□□□□ -0.92
NUP98-204ENST00000397004 LINC01547P58512 204 aaPredicted RBP9.31□□□□□ -0.92
NUP98-204ENST00000397004 RBM3P98179 157 aaKnown RBP9.31□□□□□ -0.92
NUP98-204ENST00000397004 LOC110117498A0A087WWA1 95 aa9.31□□□□□ -0.92
NUP98-204ENST00000397004 Q8NAQ8 132 aa9.31□□□□□ -0.92
NUP98-204ENST00000397004 SMIM9A6NGZ8 99 aa9.3□□□□□ -0.92
NUP98-204ENST00000397004 PRR34Q9NV39 138 aa9.3□□□□□ -0.92
NUP98-204ENST00000397004 KLK12Q9UKR0 248 aa9.3□□□□□ -0.92
NUP98-204ENST00000397004 LYRM9A8MSI8 78 aa9.3□□□□□ -0.92
NUP98-204ENST00000397004 ZNF561-AS1K7EIQ3 104 aa9.3□□□□□ -0.92
NUP98-204ENST00000397004 Q6ZVQ6 151 aa9.3□□□□□ -0.92
NUP98-204ENST00000397004 ATP5EP2Q5VTU8 51 aa9.29□□□□□ -0.92
NUP98-204ENST00000397004 Q5XG85 94 aa9.29□□□□□ -0.92
NUP98-204ENST00000397004 C20orf197Q8N268 126 aa9.29□□□□□ -0.92
NUP98-204ENST00000397004 TENM3Q9P273 2699 aa9.29□□□□□ -0.92
NUP98-204ENST00000397004 UBL5Q9BZL1 73 aa9.29□□□□□ -0.92
NUP98-204ENST00000397004 NSD1Q96L73 2696 aaPredicted RBP9.29□□□□□ -0.92
NUP98-204ENST00000397004 NOTCH2Q04721 2471 aa9.28□□□□□ -0.92
NUP98-204ENST00000397004 LAMTOR3Q9UHA4 124 aa9.28□□□□□ -0.92
NUP98-204ENST00000397004 HTN3P15516 51 aa9.27□□□□□ -0.93
NUP98-204ENST00000397004 C4orf26Q17RF5 130 aa9.27□□□□□ -0.93
NUP98-204ENST00000397004 DAD1P61803 113 aa9.26□□□□□ -0.93
NUP98-204ENST00000397004 H7BZZ5 65 aa9.25□□□□□ -0.93
NUP98-204ENST00000397004 SCXQ7RTU7 201 aa9.25□□□□□ -0.93
NUP98-204ENST00000397004 C9orf66Q5T8R8 295 aa9.25□□□□□ -0.93
NUP98-204ENST00000397004 MUC7Q8TAX7 377 aa9.25□□□□□ -0.93
NUP98-204ENST00000397004 HAMPP81172 84 aa9.24□□□□□ -0.93
NUP98-204ENST00000397004 TRBV7-4A0A0J9YYF1 115 aa9.24□□□□□ -0.93
NUP98-204ENST00000397004 LELP1Q5T871 98 aa9.24□□□□□ -0.93
NUP98-204ENST00000397004 INAFM1C9JVW0 142 aa9.24□□□□□ -0.93
NUP98-204ENST00000397004 KRTAP26-1Q6PEX3 210 aa9.24□□□□□ -0.93
NUP98-204ENST00000397004 HIGD2BQ4VC39 106 aa9.23□□□□□ -0.93
NUP98-204ENST00000397004 GVQW2A0A096LPI5 108 aaPredicted RBP9.23□□□□□ -0.93
NUP98-204ENST00000397004 ZNF73O43830 326 aaPredicted RBP9.22□□□□□ -0.93
NUP98-204ENST00000397004 VPREB1P12018 145 aa9.22□□□□□ -0.93
NUP98-204ENST00000397004 WFDC10BQ8IUB3 73 aa9.21□□□□□ -0.94
NUP98-204ENST00000397004 SNURFQ9Y675 71 aa9.21□□□□□ -0.94
NUP98-204ENST00000397004 ELOF1P60002 83 aaKnown RBP9.21□□□□□ -0.94
NUP98-204ENST00000397004 RMI2Q96E14 147 aa9.2□□□□□ -0.94
NUP98-204ENST00000397004 TM2D3Q9BRN9 247 aa9.2□□□□□ -0.94
NUP98-204ENST00000397004 EPM2AB3EWF7 344 aa9.19□□□□□ -0.94
NUP98-204ENST00000397004 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.19□□□□□ -0.94
NUP98-204ENST00000397004 Q8N9L7 120 aa9.19□□□□□ -0.94
NUP98-204ENST00000397004 DIRC1Q969H9 104 aa9.19□□□□□ -0.94
NUP98-204ENST00000397004 Q6ZRU5 148 aa9.18□□□□□ -0.94
NUP98-204ENST00000397004 TRAV7A0A075B6U4 112 aa9.18□□□□□ -0.94
NUP98-204ENST00000397004 C15orf56Q8N910 161 aa9.18□□□□□ -0.94
NUP98-204ENST00000397004 CMYA5Q8N3K9 4069 aa9.17□□□□□ -0.94
NUP98-204ENST00000397004 C5orf47Q569G3 176 aa9.17□□□□□ -0.94
NUP98-204ENST00000397004 HRCT1Q6UXD1 115 aa9.17□□□□□ -0.94
NUP98-204ENST00000397004 DNAH1Q9P2D7 4330 aa9.17□□□□□ -0.94
NUP98-204ENST00000397004 COX7BP24311 80 aa9.16□□□□□ -0.94
NUP98-204ENST00000397004 CXCL6P80162 114 aa9.16□□□□□ -0.94
NUP98-204ENST00000397004 KLKP1Q107X0 134 aa9.16□□□□□ -0.94
NUP98-204ENST00000397004 LINC00528Q8N1L1 170 aa9.16□□□□□ -0.94
NUP98-204ENST00000397004 MIFP14174 115 aa9.16□□□□□ -0.94
NUP98-204ENST00000397004 TRBV7-6A0A0J9YX20 115 aa9.15□□□□□ -0.94
NUP98-204ENST00000397004 SPART-AS1P0CW21 52 aa9.15□□□□□ -0.94
NUP98-204ENST00000397004 NDUFC2-KCTD14E9PQ53 114 aa9.15□□□□□ -0.94
NUP98-204ENST00000397004 Q6ZRP5 223 aa9.15□□□□□ -0.94
NUP98-204ENST00000397004 APOC4P55056 127 aa9.14□□□□□ -0.95
NUP98-204ENST00000397004 RETNQ9HD89 108 aa9.14□□□□□ -0.95
NUP98-204ENST00000397004 LYSTQ99698 3801 aa9.14□□□□□ -0.95
NUP98-204ENST00000397004 FAM236DA0A1B0GTK5 79 aa9.13□□□□□ -0.95
NUP98-204ENST00000397004 FAM236CP0DP71 79 aa9.13□□□□□ -0.95
NUP98-204ENST00000397004 CAMK2N2Q96S95 79 aa9.12□□□□□ -0.95
NUP98-204ENST00000397004 BCE1O60756 84 aa9.11□□□□□ -0.95
NUP98-204ENST00000397004 F8WEM9 126 aa9.1□□□□□ -0.95
NUP98-204ENST00000397004 BPY2O14599 106 aa9.1□□□□□ -0.95
NUP98-204ENST00000397004 PDE6GP18545 87 aa9.1□□□□□ -0.95
NUP98-204ENST00000397004 SERTAD4-AS1Q5TG53 156 aa9.1□□□□□ -0.95
NUP98-204ENST00000397004 FP248Q71RG6 208 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms