RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 IGLV10-54A0A075B6I4 117 aa6.04□□□□□ -1.44
NDE1-202ENST00000396355 PF4P02776 101 aa6.04□□□□□ -1.44
NDE1-202ENST00000396355 IGHV4-38-2P0DP08 117 aa6.04□□□□□ -1.44
NDE1-202ENST00000396355 COX6A2Q02221 97 aa6.04□□□□□ -1.44
NDE1-202ENST00000396355 FAM229BQ4G0N7 80 aa6.04□□□□□ -1.44
NDE1-202ENST00000396355 LYPD5Q6UWN5 251 aa6.04□□□□□ -1.44
NDE1-202ENST00000396355 LINC00269Q8N2A0 174 aa6.04□□□□□ -1.44
NDE1-202ENST00000396355 DEFB131AP59861 70 aa6.04□□□□□ -1.44
NDE1-202ENST00000396355 ZNF469Q96JG9 3925 aaPredicted RBP6.04□□□□□ -1.44
NDE1-202ENST00000396355 Q6ZQY7 126 aa6.04□□□□□ -1.44
NDE1-202ENST00000396355 Q6ZVQ6 151 aa6.04□□□□□ -1.44
NDE1-202ENST00000396355 AVPP01185 164 aa6.03□□□□□ -1.44
NDE1-202ENST00000396355 CCL18P55774 89 aa6.03□□□□□ -1.44
NDE1-202ENST00000396355 HIGD2BQ4VC39 106 aa6.03□□□□□ -1.44
NDE1-202ENST00000396355 NTM-AS1Q6ZSK4 140 aa6.03□□□□□ -1.44
NDE1-202ENST00000396355 MSMBP08118 114 aa6.03□□□□□ -1.44
NDE1-202ENST00000396355 MP68P56378 58 aa6.02□□□□□ -1.45
NDE1-202ENST00000396355 LENEPQ9Y5L5 61 aa6.02□□□□□ -1.45
NDE1-202ENST00000396355 HCG22E2RYF7 251 aa6.02□□□□□ -1.45
NDE1-202ENST00000396355 LINC01546A6NGU7 62 aa6.01□□□□□ -1.45
NDE1-202ENST00000396355 LYRM9A8MSI8 78 aa6.01□□□□□ -1.45
NDE1-202ENST00000396355 IGHV4-59P01825 116 aa6.01□□□□□ -1.45
NDE1-202ENST00000396355 C11orf72Q8NBR9 251 aa6.01□□□□□ -1.45
NDE1-202ENST00000396355 LMO4P61968 165 aa6.01□□□□□ -1.45
NDE1-202ENST00000396355 DEFB116Q30KQ4 102 aa6.01□□□□□ -1.45
NDE1-202ENST00000396355 KLK9Q2XQG4 91 aa6□□□□□ -1.45
NDE1-202ENST00000396355 DEFB136Q30KP8 78 aa6□□□□□ -1.45
NDE1-202ENST00000396355 LITAFQ99732 161 aa6□□□□□ -1.45
NDE1-202ENST00000396355 C1orf158Q8N1D5 194 aa5.99□□□□□ -1.45
NDE1-202ENST00000396355 C6orf223Q8N319 242 aa5.99□□□□□ -1.45
NDE1-202ENST00000396355 KRTAP1-1Q07627 177 aa5.99□□□□□ -1.45
NDE1-202ENST00000396355 C5orf56Q8N8D9 126 aa5.99□□□□□ -1.45
NDE1-202ENST00000396355 ZNF73O43830 326 aaPredicted RBP5.99□□□□□ -1.45
NDE1-202ENST00000396355 WFDC13Q8IUB5 93 aa5.99□□□□□ -1.45
NDE1-202ENST00000396355 DEFB130BP0DP73 79 aa5.98□□□□□ -1.45
NDE1-202ENST00000396355 DEFB130AP0DP74 79 aa5.98□□□□□ -1.45
NDE1-202ENST00000396355 HTN3P15516 51 aa5.98□□□□□ -1.45
NDE1-202ENST00000396355 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.98□□□□□ -1.45
NDE1-202ENST00000396355 KTN1-AS1Q86SY8 53 aa5.98□□□□□ -1.45
NDE1-202ENST00000396355 WFDC10BQ8IUB3 73 aa5.98□□□□□ -1.45
NDE1-202ENST00000396355 DEFB112Q30KQ8 113 aa5.98□□□□□ -1.45
NDE1-202ENST00000396355 DIRC1Q969H9 104 aa5.98□□□□□ -1.45
NDE1-202ENST00000396355 USMG5Q96IX5 58 aa5.98□□□□□ -1.45
NDE1-202ENST00000396355 VPREB1P12018 145 aa5.98□□□□□ -1.45
NDE1-202ENST00000396355 LINC00242Q5T6M2 205 aa5.98□□□□□ -1.45
NDE1-202ENST00000396355 APRG1Q8IVJ8 170 aa5.98□□□□□ -1.45
NDE1-202ENST00000396355 TRAV22A0A0B4J277 110 aa5.97□□□□□ -1.45
NDE1-202ENST00000396355 KLKP1Q107X0 134 aa5.97□□□□□ -1.45
NDE1-202ENST00000396355 NKAPP1Q8N9T2 125 aa5.97□□□□□ -1.45
NDE1-202ENST00000396355 Q8N814 137 aa5.97□□□□□ -1.45
NDE1-202ENST00000396355 NDUFS5O43920 106 aa5.97□□□□□ -1.45
NDE1-202ENST00000396355 SMIM1B2RUZ4 78 aa5.96□□□□□ -1.45
NDE1-202ENST00000396355 LINC00208Q96KT6 92 aa5.96□□□□□ -1.45
NDE1-202ENST00000396355 FBN1P35555 2871 aaKnown RBP5.96□□□□□ -1.46
NDE1-202ENST00000396355 NDUFA4O00483 81 aa5.95□□□□□ -1.46
NDE1-202ENST00000396355 OXLD1Q5BKU9 147 aa5.95□□□□□ -1.46
NDE1-202ENST00000396355 MED14OSP0DP75 135 aa5.95□□□□□ -1.46
NDE1-202ENST00000396355 C10orf99Q6UWK7 81 aa5.95□□□□□ -1.46
NDE1-202ENST00000396355 PRR15Q8IV56 129 aa5.95□□□□□ -1.46
NDE1-202ENST00000396355 C1orf64Q8NEQ6 169 aa5.95□□□□□ -1.46
NDE1-202ENST00000396355 LINC01006Q8NI28 216 aa5.94□□□□□ -1.46
NDE1-202ENST00000396355 XAGE1AQ9HD64 81 aa5.94□□□□□ -1.46
NDE1-202ENST00000396355 CCL24O00175 119 aa5.93□□□□□ -1.46
NDE1-202ENST00000396355 PDE6GP18545 87 aa5.93□□□□□ -1.46
NDE1-202ENST00000396355 NOP10Q9NPE3 64 aaKnown RBP5.93□□□□□ -1.46
NDE1-202ENST00000396355 C9orf116Q5BN46 136 aaPredicted RBP5.93□□□□□ -1.46
NDE1-202ENST00000396355 C16orf95Q9H693 158 aa5.93□□□□□ -1.46
NDE1-202ENST00000396355 ANGP03950 147 aaKnown RBP5.92□□□□□ -1.46
NDE1-202ENST00000396355 SLURP1P55000 103 aa5.92□□□□□ -1.46
NDE1-202ENST00000396355 LINC00315P59091 139 aa5.92□□□□□ -1.46
NDE1-202ENST00000396355 SMIM29Q86T20 159 aa5.92□□□□□ -1.46
NDE1-202ENST00000396355 TGP01266 2768 aa5.92□□□□□ -1.46
NDE1-202ENST00000396355 TRBV10-3A0A0K0K1G6 114 aa5.92□□□□□ -1.46
NDE1-202ENST00000396355 ESM1Q9NQ30 184 aa5.92□□□□□ -1.46
NDE1-202ENST00000396355 SPAG11BQ08648 103 aa5.91□□□□□ -1.46
NDE1-202ENST00000396355 LINC00575Q6W349 94 aa5.91□□□□□ -1.46
NDE1-202ENST00000396355 KIF25-AS1Q9Y6Z4 181 aa5.91□□□□□ -1.46
NDE1-202ENST00000396355 M0R378 163 aa5.91□□□□□ -1.46
NDE1-202ENST00000396355 KLK12Q9UKR0 248 aa5.91□□□□□ -1.46
NDE1-202ENST00000396355 IBA57-AS1B1ANH7 110 aa5.9□□□□□ -1.46
NDE1-202ENST00000396355 M0R2N4 97 aa5.9□□□□□ -1.46
NDE1-202ENST00000396355 WFDC10AQ9H1F0 79 aa5.9□□□□□ -1.46
NDE1-202ENST00000396355 ZNF706Q9Y5V0 76 aaPredicted RBP5.9□□□□□ -1.46
NDE1-202ENST00000396355 TRBV6-4A0A1B0GX49 114 aa5.9□□□□□ -1.47
NDE1-202ENST00000396355 FSHBP01225 129 aa5.9□□□□□ -1.47
NDE1-202ENST00000396355 Q6ZSN1 163 aa5.9□□□□□ -1.47
NDE1-202ENST00000396355 PKD1L1Q8TDX9 2849 aa5.9□□□□□ -1.47
NDE1-202ENST00000396355 SPAG11AQ6PDA7 123 aa5.9□□□□□ -1.47
NDE1-202ENST00000396355 PRAC1Q96KF2 57 aa5.9□□□□□ -1.47
NDE1-202ENST00000396355 IGKV2-28A0A075B6P5 120 aa5.89□□□□□ -1.47
NDE1-202ENST00000396355 A8MU10 97 aa5.89□□□□□ -1.47
NDE1-202ENST00000396355 IGKV2D-28P01615 120 aa5.89□□□□□ -1.47
NDE1-202ENST00000396355 CHCHD7Q9BUK0 85 aa5.89□□□□□ -1.47
NDE1-202ENST00000396355 SYCNQ0VAF6 134 aa5.89□□□□□ -1.47
NDE1-202ENST00000396355 MUC7Q8TAX7 377 aa5.89□□□□□ -1.47
NDE1-202ENST00000396355 K7EMT4 169 aa5.89□□□□□ -1.47
NDE1-202ENST00000396355 DNHD1Q96M86 4753 aa5.88□□□□□ -1.47
NDE1-202ENST00000396355 PCOTHQ58A44 107 aa5.88□□□□□ -1.47
NDE1-202ENST00000396355 A6NDX4 124 aa5.88□□□□□ -1.47
NDE1-202ENST00000396355 COX7BP24311 80 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms