RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 IGLV5-39A0A0G2JS06 123 aa3.81□□□□□ -1.8
VPS13C-204ENST00000395898 X6R8D5 127 aa3.81□□□□□ -1.8
VPS13C-204ENST00000395898 BRCA2P51587 3418 aa3.81□□□□□ -1.8
VPS13C-204ENST00000395898 A8MTW9 85 aa3.81□□□□□ -1.8
VPS13C-204ENST00000395898 PRLHP81277 87 aa3.81□□□□□ -1.8
VPS13C-204ENST00000395898 LINC00846Q9NV44 126 aa3.81□□□□□ -1.8
VPS13C-204ENST00000395898 TMEM254Q8TBM7 123 aa3.8□□□□□ -1.8
VPS13C-204ENST00000395898 A0A087WVE0 104 aa3.8□□□□□ -1.8
VPS13C-204ENST00000395898 SBSPONQ8IVN8 264 aa3.8□□□□□ -1.8
VPS13C-204ENST00000395898 SMCR5Q8TEV8 140 aa3.8□□□□□ -1.8
VPS13C-204ENST00000395898 IGLV5-45A0A087WSX0 123 aa3.8□□□□□ -1.8
VPS13C-204ENST00000395898 BCE1O60756 84 aa3.79□□□□□ -1.8
VPS13C-204ENST00000395898 DEFB116Q30KQ4 102 aa3.79□□□□□ -1.8
VPS13C-204ENST00000395898 MDFIQ99750 246 aa3.79□□□□□ -1.8
VPS13C-204ENST00000395898 KIAA0087Q14695 138 aa3.79□□□□□ -1.8
VPS13C-204ENST00000395898 SOSTDC1Q6X4U4 206 aa3.79□□□□□ -1.8
VPS13C-204ENST00000395898 ACYP2P14621 99 aa3.78□□□□□ -1.8
VPS13C-204ENST00000395898 PCOTHQ58A44 107 aa3.78□□□□□ -1.8
VPS13C-204ENST00000395898 ELOF1P60002 83 aaKnown RBP3.78□□□□□ -1.8
VPS13C-204ENST00000395898 C1orf64Q8NEQ6 169 aa3.78□□□□□ -1.8
VPS13C-204ENST00000395898 LINC00315P59091 139 aa3.78□□□□□ -1.8
VPS13C-204ENST00000395898 C7orf65Q6ZTY9 151 aa3.77□□□□□ -1.81
VPS13C-204ENST00000395898 LINC00167Q96N53 147 aa3.77□□□□□ -1.81
VPS13C-204ENST00000395898 PSPHP1O15172 72 aa3.77□□□□□ -1.81
VPS13C-204ENST00000395898 C16orf90A8MZG2 172 aa3.77□□□□□ -1.81
VPS13C-204ENST00000395898 C6orf48Q9UBA6 75 aa3.77□□□□□ -1.81
VPS13C-204ENST00000395898 H3BPC8 53 aa3.77□□□□□ -1.81
VPS13C-204ENST00000395898 SPATA3Q8NHX4 192 aa3.77□□□□□ -1.81
VPS13C-204ENST00000395898 ZNF462Q96JM2 2506 aa3.77□□□□□ -1.81
VPS13C-204ENST00000395898 CHD8Q9HCK8 2581 aa3.76□□□□□ -1.81
VPS13C-204ENST00000395898 MOBPQ13875 183 aa3.76□□□□□ -1.81
VPS13C-204ENST00000395898 A0A0C4DFX4 3053 aa3.76□□□□□ -1.81
VPS13C-204ENST00000395898 LINC00313P59037 77 aa3.76□□□□□ -1.81
VPS13C-204ENST00000395898 CRYGAP11844 174 aa3.76□□□□□ -1.81
VPS13C-204ENST00000395898 MTORP42345 2549 aa3.76□□□□□ -1.81
VPS13C-204ENST00000395898 SPINK1P00995 79 aa3.76□□□□□ -1.81
VPS13C-204ENST00000395898 A0A1B0GU69 56 aa3.75□□□□□ -1.81
VPS13C-204ENST00000395898 FAM229AH3BQW9 127 aa3.75□□□□□ -1.81
VPS13C-204ENST00000395898 RETNLBQ9BQ08 111 aa3.75□□□□□ -1.81
VPS13C-204ENST00000395898 CEP295Q9C0D2 2601 aa3.75□□□□□ -1.81
VPS13C-204ENST00000395898 IGKV2D-30A0A075B6S6 120 aa3.75□□□□□ -1.81
VPS13C-204ENST00000395898 LOC110117498A0A087WWA1 95 aa3.75□□□□□ -1.81
VPS13C-204ENST00000395898 IGKV2-30P06310 120 aa3.75□□□□□ -1.81
VPS13C-204ENST00000395898 Q6ZRX8 168 aa3.75□□□□□ -1.81
VPS13C-204ENST00000395898 LAMA3Q16787 3333 aa3.75□□□□□ -1.81
VPS13C-204ENST00000395898 ACANP16112 2415 aa3.75□□□□□ -1.81
VPS13C-204ENST00000395898 SMIM29Q86T20 159 aa3.75□□□□□ -1.81
VPS13C-204ENST00000395898 CFAP54Q96N23 3096 aa3.75□□□□□ -1.81
VPS13C-204ENST00000395898 CDIP1Q9H305 208 aa3.75□□□□□ -1.81
VPS13C-204ENST00000395898 GVQW2A0A096LPI5 108 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-204ENST00000395898 Q6ZRP5 223 aa3.74□□□□□ -1.81
VPS13C-204ENST00000395898 SPACA4Q8TDM5 124 aa3.74□□□□□ -1.81
VPS13C-204ENST00000395898 Q6ZQT0 140 aa3.74□□□□□ -1.81
VPS13C-204ENST00000395898 Q8NAQ8 132 aa3.74□□□□□ -1.81
VPS13C-204ENST00000395898 LINC00476Q8WZB0 136 aa3.74□□□□□ -1.81
VPS13C-204ENST00000395898 Q8NBF4 154 aa3.73□□□□□ -1.81
VPS13C-204ENST00000395898 TRAV22A0A0B4J277 110 aa3.73□□□□□ -1.81
VPS13C-204ENST00000395898 RPS28P62857 69 aaKnown RBP3.73□□□□□ -1.81
VPS13C-204ENST00000395898 TYMSOSQ8TAI1 123 aa3.73□□□□□ -1.81
VPS13C-204ENST00000395898 DNAH10OSP0CZ25 163 aa3.73□□□□□ -1.81
VPS13C-204ENST00000395898 KLK9Q2XQG4 91 aa3.73□□□□□ -1.81
VPS13C-204ENST00000395898 NBDYA0A0U1RRE5 68 aa3.72□□□□□ -1.81
VPS13C-204ENST00000395898 TRBV7-4A0A0J9YYF1 115 aa3.72□□□□□ -1.81
VPS13C-204ENST00000395898 RTL8CO15255 209 aa3.72□□□□□ -1.81
VPS13C-204ENST00000395898 DNAH14Q0VDD8 3507 aa3.72□□□□□ -1.81
VPS13C-204ENST00000395898 FASNP49327 2511 aaKnown RBP3.72□□□□□ -1.81
VPS13C-204ENST00000395898 PHF5AQ7RTV0 110 aaKnown RBP3.72□□□□□ -1.81
VPS13C-204ENST00000395898 CELSR3Q9NYQ7 3312 aa3.72□□□□□ -1.81
VPS13C-204ENST00000395898 IGLV6-57P01721 117 aa3.71□□□□□ -1.81
VPS13C-204ENST00000395898 EPM2AB3EWF7 344 aa3.71□□□□□ -1.82
VPS13C-204ENST00000395898 POLQO75417 2590 aa3.71□□□□□ -1.82
VPS13C-204ENST00000395898 LINC00588Q9Y4M8 146 aa3.71□□□□□ -1.82
VPS13C-204ENST00000395898 CDH23Q9H251 3354 aa3.71□□□□□ -1.82
VPS13C-204ENST00000395898 SPAG11AQ6PDA7 123 aa3.71□□□□□ -1.82
VPS13C-204ENST00000395898 FAM218AQ96MZ4 157 aa3.7□□□□□ -1.82
VPS13C-204ENST00000395898 PRO0628Q9UI54 55 aa3.7□□□□□ -1.82
VPS13C-204ENST00000395898 SMCPP49901 116 aaPredicted RBP3.7□□□□□ -1.82
VPS13C-204ENST00000395898 C8orf87E5RJ46 101 aa3.69□□□□□ -1.82
VPS13C-204ENST00000395898 CHD7Q9P2D1 2997 aa3.69□□□□□ -1.82
VPS13C-204ENST00000395898 KRTAP24-1Q3LI83 254 aa3.69□□□□□ -1.82
VPS13C-204ENST00000395898 Q9UF83 564 aa3.69□□□□□ -1.82
VPS13C-204ENST00000395898 PRO0461Q9UI25 63 aa3.69□□□□□ -1.82
VPS13C-204ENST00000395898 A8MWP4 228 aa3.69□□□□□ -1.82
VPS13C-204ENST00000395898 TRIOO75962 3097 aa3.69□□□□□ -1.82
VPS13C-204ENST00000395898 LOC101927531A0A1B0GV80 90 aa3.69□□□□□ -1.82
VPS13C-204ENST00000395898 PRUNE2Q8WUY3 3088 aa3.69□□□□□ -1.82
VPS13C-204ENST00000395898 PLA2G1BP04054 148 aaKnown RBP3.68□□□□□ -1.82
VPS13C-204ENST00000395898 CHTF8P0CG12 524 aa3.68□□□□□ -1.82
VPS13C-204ENST00000395898 WWC2-AS2Q96NR7 200 aa3.68□□□□□ -1.82
VPS13C-204ENST00000395898 ATP11AUNQ6ZP68 121 aa3.68□□□□□ -1.82
VPS13C-204ENST00000395898 CR1P17927 2039 aa3.68□□□□□ -1.82
VPS13C-204ENST00000395898 CSNK1G2-AS1Q8NCQ2 148 aa3.68□□□□□ -1.82
VPS13C-204ENST00000395898 ERC2-IT1O76042 136 aa3.67□□□□□ -1.82
VPS13C-204ENST00000395898 VPREB1P12018 145 aa3.67□□□□□ -1.82
VPS13C-204ENST00000395898 REV3LO60673 3130 aa3.67□□□□□ -1.82
VPS13C-204ENST00000395898 USP24Q9UPU5 2620 aa3.67□□□□□ -1.82
VPS13C-204ENST00000395898 Q96NJ1 140 aa3.66□□□□□ -1.82
VPS13C-204ENST00000395898 KCNQ1DNQ9H478 68 aa3.66□□□□□ -1.82
VPS13C-204ENST00000395898 TM2D3Q9BRN9 247 aa3.66□□□□□ -1.82
VPS13C-204ENST00000395898 RANBP2P49792 3224 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms