RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 CXCL5P42830 114 aa9.09□□□□□ -0.95
SNCA-205ENST00000394991 FAM229BQ4G0N7 80 aa9.09□□□□□ -0.95
SNCA-205ENST00000394991 HSBP1O75506 76 aa9.07□□□□□ -0.96
SNCA-205ENST00000394991 ZNF22P17026 224 aaPredicted RBP9.07□□□□□ -0.96
SNCA-205ENST00000394991 PPDPFQ9H3Y8 114 aa9.07□□□□□ -0.96
SNCA-205ENST00000394991 GAGE10A6NGK3 116 aa9.06□□□□□ -0.96
SNCA-205ENST00000394991 FAM19A2Q8N3H0 131 aa9.06□□□□□ -0.96
SNCA-205ENST00000394991 KRTAP4-1Q9BYQ7 146 aa9.06□□□□□ -0.96
SNCA-205ENST00000394991 CHTOPQ9Y3Y2 248 aaKnown RBP9.06□□□□□ -0.96
SNCA-205ENST00000394991 LINC01547P58512 204 aaPredicted RBP9.05□□□□□ -0.96
SNCA-205ENST00000394991 TMEM170BQ5T4T1 132 aa9.05□□□□□ -0.96
SNCA-205ENST00000394991 IFI27L1Q96BM0 104 aa9.05□□□□□ -0.96
SNCA-205ENST00000394991 C11orf86A6NJI1 115 aa9.04□□□□□ -0.96
SNCA-205ENST00000394991 COLCA2A8K830 154 aa9.04□□□□□ -0.96
SNCA-205ENST00000394991 UBE2AP49459 152 aa9.04□□□□□ -0.96
SNCA-205ENST00000394991 IGKV2D-26A0A0A0MRZ7 120 aa9.03□□□□□ -0.96
SNCA-205ENST00000394991 CTAG1AP78358 180 aa9.03□□□□□ -0.96
SNCA-205ENST00000394991 IGLV5-39A0A0G2JS06 123 aa9.02□□□□□ -0.97
SNCA-205ENST00000394991 LOC100996750A0A140TA64 210 aa9.02□□□□□ -0.97
SNCA-205ENST00000394991 KRTAP4-6Q9BYQ5 205 aa9.02□□□□□ -0.97
SNCA-205ENST00000394991 IGLV5-37A0A075B6J1 123 aa9.01□□□□□ -0.97
SNCA-205ENST00000394991 TRAV12-1A0A0B4J245 112 aa9.01□□□□□ -0.97
SNCA-205ENST00000394991 SCO1O75880 301 aa9.01□□□□□ -0.97
SNCA-205ENST00000394991 SERF1AO75920 110 aa9.01□□□□□ -0.97
SNCA-205ENST00000394991 H0Y8G0 127 aa9□□□□□ -0.97
SNCA-205ENST00000394991 ASB16-AS1Q495Z4 193 aa9□□□□□ -0.97
SNCA-205ENST00000394991 C3orf22Q8N5N4 141 aa9□□□□□ -0.97
SNCA-205ENST00000394991 PFN2P35080 140 aa8.99□□□□□ -0.97
SNCA-205ENST00000394991 LINC00310P59036 64 aa8.99□□□□□ -0.97
SNCA-205ENST00000394991 PRLHP81277 87 aa8.99□□□□□ -0.97
SNCA-205ENST00000394991 ZNF625Q96I27 306 aaPredicted RBP8.99□□□□□ -0.97
SNCA-205ENST00000394991 LEPROTL1O95214 131 aa8.98□□□□□ -0.97
SNCA-205ENST00000394991 KRTAP13-3Q3SY46 172 aa8.98□□□□□ -0.97
SNCA-205ENST00000394991 IGKV2-28A0A075B6P5 120 aa8.97□□□□□ -0.97
SNCA-205ENST00000394991 TMEM223A0PJW6 202 aa8.97□□□□□ -0.97
SNCA-205ENST00000394991 IGKV2D-28P01615 120 aa8.97□□□□□ -0.97
SNCA-205ENST00000394991 FABP4P15090 132 aa8.97□□□□□ -0.97
SNCA-205ENST00000394991 FP248Q71RG6 208 aaPredicted RBP8.96□□□□□ -0.98
SNCA-205ENST00000394991 NKAPP1Q8N9T2 125 aa8.96□□□□□ -0.98
SNCA-205ENST00000394991 ERG28Q9UKR5 140 aa8.96□□□□□ -0.98
SNCA-205ENST00000394991 HSPB8Q9UJY1 196 aa8.95□□□□□ -0.98
SNCA-205ENST00000394991 LORP23490 312 aaPredicted RBP8.94□□□□□ -0.98
SNCA-205ENST00000394991 SFTA2Q6UW10 78 aa8.94□□□□□ -0.98
SNCA-205ENST00000394991 LINC00337Q8N6G1 96 aa8.94□□□□□ -0.98
SNCA-205ENST00000394991 TMEM238C9JI98 176 aa8.93□□□□□ -0.98
SNCA-205ENST00000394991 FAM19A1Q7Z5A9 133 aa8.93□□□□□ -0.98
SNCA-205ENST00000394991 PLEKHB2Q96CS7 222 aa8.93□□□□□ -0.98
SNCA-205ENST00000394991 COX17Q14061 63 aa8.92□□□□□ -0.98
SNCA-205ENST00000394991 SPAG11AQ6PDA7 123 aa8.92□□□□□ -0.98
SNCA-205ENST00000394991 TMEM126AQ9H061 195 aa8.92□□□□□ -0.98
SNCA-205ENST00000394991 SND1-IT1Q9HBX3 110 aa8.92□□□□□ -0.98
SNCA-205ENST00000394991 A0A0U1RRA0 63 aa8.91□□□□□ -0.98
SNCA-205ENST00000394991 LINC00158P58513 81 aa8.91□□□□□ -0.98
SNCA-205ENST00000394991 PMCHL2Q9BQD1 86 aa8.91□□□□□ -0.98
SNCA-205ENST00000394991 HIST1H2BKO60814 126 aa8.9□□□□□ -0.98
SNCA-205ENST00000394991 HIST1H2BJP06899 126 aa8.9□□□□□ -0.98
SNCA-205ENST00000394991 HIST1H2BOP23527 126 aa8.9□□□□□ -0.98
SNCA-205ENST00000394991 HIST1H2BBP33778 126 aa8.9□□□□□ -0.98
SNCA-205ENST00000394991 HIST1H2BDP58876 126 aa8.9□□□□□ -0.98
SNCA-205ENST00000394991 HIST1H2BCP62807 126 aa8.9□□□□□ -0.98
SNCA-205ENST00000394991 HIST2H2BEQ16778 126 aa8.9□□□□□ -0.98
SNCA-205ENST00000394991 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.9□□□□□ -0.98
SNCA-205ENST00000394991 HIST1H2BHQ93079 126 aa8.9□□□□□ -0.98
SNCA-205ENST00000394991 HIST1H2BNQ99877 126 aa8.9□□□□□ -0.98
SNCA-205ENST00000394991 HIST1H2BMQ99879 126 aa8.9□□□□□ -0.98
SNCA-205ENST00000394991 M0R378 163 aa8.89□□□□□ -0.99
SNCA-205ENST00000394991 VPREB1P12018 145 aa8.89□□□□□ -0.99
SNCA-205ENST00000394991 PLNP26678 52 aa8.89□□□□□ -0.99
SNCA-205ENST00000394991 SEC61BP60468 96 aaKnown RBP8.89□□□□□ -0.99
SNCA-205ENST00000394991 MAP1LC3CQ9BXW4 147 aa8.89□□□□□ -0.99
SNCA-205ENST00000394991 ATP6V1G1O75348 118 aa8.88□□□□□ -0.99
SNCA-205ENST00000394991 DPM2O94777 84 aa8.88□□□□□ -0.99
SNCA-205ENST00000394991 MEIG1Q5JSS6 88 aa8.88□□□□□ -0.99
SNCA-205ENST00000394991 IGKCP01834 107 aa8.87□□□□□ -0.99
SNCA-205ENST00000394991 SMIM13P0DJ93 91 aa8.87□□□□□ -0.99
SNCA-205ENST00000394991 RPL24P83731 157 aaKnown RBP8.87□□□□□ -0.99
SNCA-205ENST00000394991 NDUFA12Q9UI09 145 aa8.87□□□□□ -0.99
SNCA-205ENST00000394991 LEPROTO15243 131 aa8.86□□□□□ -0.99
SNCA-205ENST00000394991 HERVK_113P61574 105 aa8.86□□□□□ -0.99
SNCA-205ENST00000394991 HERV-K104P63124 156 aa8.86□□□□□ -0.99
SNCA-205ENST00000394991 DAND5Q8N907 189 aa8.86□□□□□ -0.99
SNCA-205ENST00000394991 SPRR4Q96PI1 79 aa8.86□□□□□ -0.99
SNCA-205ENST00000394991 HIGD2AQ9BW72 106 aa8.86□□□□□ -0.99
SNCA-205ENST00000394991 MYMXA0A1B0GTQ4 84 aa8.85□□□□□ -0.99
SNCA-205ENST00000394991 Q8NBF4 154 aa8.85□□□□□ -0.99
SNCA-205ENST00000394991 Q8NDZ9 215 aa8.85□□□□□ -0.99
SNCA-205ENST00000394991 TSPEAR-AS2P59090 65 aa8.84□□□□□ -0.99
SNCA-205ENST00000394991 KRTAP19-2Q3LHN2 52 aa8.84□□□□□ -0.99
SNCA-205ENST00000394991 LINC00587B1AMM8 73 aa8.82□□□□□ -1
SNCA-205ENST00000394991 SYS1-DBNDD2H3BUS1 97 aa8.82□□□□□ -1
SNCA-205ENST00000394991 J3QQQ9 107 aa8.82□□□□□ -1
SNCA-205ENST00000394991 LGALS3P17931 250 aaKnown RBP8.82□□□□□ -1
SNCA-205ENST00000394991 MIR7-3HGQ8N6C7 128 aa8.82□□□□□ -1
SNCA-205ENST00000394991 MT1HP80294 61 aa8.81□□□□□ -1
SNCA-205ENST00000394991 BOD1L2Q8IYS8 172 aa8.8□□□□□ -1
SNCA-205ENST00000394991 XP32Q5T750 250 aa8.79□□□□□ -1
SNCA-205ENST00000394991 NCR3O14931 201 aa8.78□□□□□ -1
SNCA-205ENST00000394991 SPINK1P00995 79 aa8.78□□□□□ -1
SNCA-205ENST00000394991 NMUP48645 174 aa8.78□□□□□ -1
SNCA-205ENST00000394991 PET117Q6UWS5 81 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms