RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 XAGE1AQ9HD64 81 aa11.64□□□□□ -0.55
UPK3B-203ENST00000394849 TMEM223A0PJW6 202 aa11.63□□□□□ -0.55
UPK3B-203ENST00000394849 ATP6V1G1O75348 118 aa11.61□□□□□ -0.55
UPK3B-203ENST00000394849 CRYGAP11844 174 aa11.61□□□□□ -0.55
UPK3B-203ENST00000394849 SFTA2Q6UW10 78 aa11.61□□□□□ -0.55
UPK3B-203ENST00000394849 MAP1LC3CQ9BXW4 147 aa11.61□□□□□ -0.55
UPK3B-203ENST00000394849 PFN2P35080 140 aa11.6□□□□□ -0.55
UPK3B-203ENST00000394849 TYMSOSQ8TAI1 123 aa11.6□□□□□ -0.55
UPK3B-203ENST00000394849 PLNP26678 52 aa11.59□□□□□ -0.55
UPK3B-203ENST00000394849 LBHQ53QV2 105 aaPredicted RBP11.59□□□□□ -0.55
UPK3B-203ENST00000394849 ZNF625Q96I27 306 aaPredicted RBP11.59□□□□□ -0.55
UPK3B-203ENST00000394849 RPL28P46779 137 aaKnown RBP11.58□□□□□ -0.56
UPK3B-203ENST00000394849 ERG28Q9UKR5 140 aa11.58□□□□□ -0.56
UPK3B-203ENST00000394849 DPM2O94777 84 aa11.57□□□□□ -0.56
UPK3B-203ENST00000394849 PMCHL2Q9BQD1 86 aa11.57□□□□□ -0.56
UPK3B-203ENST00000394849 A0A087X002 238 aa11.56□□□□□ -0.56
UPK3B-203ENST00000394849 CDIP1Q9H305 208 aa11.56□□□□□ -0.56
UPK3B-203ENST00000394849 IGKCP01834 107 aa11.55□□□□□ -0.56
UPK3B-203ENST00000394849 HERVK_113P61574 105 aa11.55□□□□□ -0.56
UPK3B-203ENST00000394849 COX17Q14061 63 aa11.55□□□□□ -0.56
UPK3B-203ENST00000394849 TPRXLQ17RH7 258 aa11.55□□□□□ -0.56
UPK3B-203ENST00000394849 C22orf24Q9Y442 160 aa11.55□□□□□ -0.56
UPK3B-203ENST00000394849 SYS1-DBNDD2H3BUS1 97 aa11.52□□□□□ -0.57
UPK3B-203ENST00000394849 BCE1O60756 84 aa11.52□□□□□ -0.57
UPK3B-203ENST00000394849 LINC00158P58513 81 aa11.52□□□□□ -0.57
UPK3B-203ENST00000394849 CTAG1AP78358 180 aa11.52□□□□□ -0.57
UPK3B-203ENST00000394849 COA6Q5JTJ3 125 aaKnown RBP11.52□□□□□ -0.57
UPK3B-203ENST00000394849 TP73-AS1Q9UF72 201 aa11.52□□□□□ -0.57
UPK3B-203ENST00000394849 MEIG1Q5JSS6 88 aa11.51□□□□□ -0.57
UPK3B-203ENST00000394849 MRPL55Q7Z7F7 128 aaKnown RBP11.51□□□□□ -0.57
UPK3B-203ENST00000394849 PLEKHB2Q96CS7 222 aa11.51□□□□□ -0.57
UPK3B-203ENST00000394849 SND1-IT1Q9HBX3 110 aa11.51□□□□□ -0.57
UPK3B-203ENST00000394849 NDUFA12Q9UI09 145 aa11.51□□□□□ -0.57
UPK3B-203ENST00000394849 A0A0U1RRA0 63 aa11.5□□□□□ -0.57
UPK3B-203ENST00000394849 LEPROTO15243 131 aa11.5□□□□□ -0.57
UPK3B-203ENST00000394849 HERV-K104P63124 156 aa11.5□□□□□ -0.57
UPK3B-203ENST00000394849 NKAPP1Q8N9T2 125 aa11.5□□□□□ -0.57
UPK3B-203ENST00000394849 MYMXA0A1B0GTQ4 84 aa11.49□□□□□ -0.57
UPK3B-203ENST00000394849 PET117Q6UWS5 81 aa11.48□□□□□ -0.57
UPK3B-203ENST00000394849 LGALS3P17931 250 aaKnown RBP11.47□□□□□ -0.57
UPK3B-203ENST00000394849 FAM229BQ4G0N7 80 aa11.47□□□□□ -0.57
UPK3B-203ENST00000394849 LINC00304Q8N9R0 145 aa11.47□□□□□ -0.57
UPK3B-203ENST00000394849 IGLV7-46A0A075B6I9 117 aa11.46□□□□□ -0.57
UPK3B-203ENST00000394849 IGLV5-37A0A075B6J1 123 aa11.46□□□□□ -0.57
UPK3B-203ENST00000394849 GAGE10A6NGK3 116 aa11.46□□□□□ -0.57
UPK3B-203ENST00000394849 LINC00587B1AMM8 73 aa11.46□□□□□ -0.57
UPK3B-203ENST00000394849 J3QQQ9 107 aa11.46□□□□□ -0.57
UPK3B-203ENST00000394849 SMIM13P0DJ93 91 aa11.46□□□□□ -0.57
UPK3B-203ENST00000394849 TSPEAR-AS2P59090 65 aa11.46□□□□□ -0.57
UPK3B-203ENST00000394849 RPL24P83731 157 aaKnown RBP11.46□□□□□ -0.57
UPK3B-203ENST00000394849 RETNLBQ9BQ08 111 aa11.46□□□□□ -0.57
UPK3B-203ENST00000394849 C3orf79P0CE67 100 aa11.45□□□□□ -0.58
UPK3B-203ENST00000394849 KRTDAPP60985 99 aa11.45□□□□□ -0.58
UPK3B-203ENST00000394849 LINC01545Q5VT33 79 aa11.45□□□□□ -0.58
UPK3B-203ENST00000394849 LINC00167Q96N53 147 aa11.45□□□□□ -0.58
UPK3B-203ENST00000394849 MUC17Q685J3 4493 aa11.43□□□□□ -0.58
UPK3B-203ENST00000394849 RPL37AP8A6NKH3 93 aa11.43□□□□□ -0.58
UPK3B-203ENST00000394849 NMUP48645 174 aa11.43□□□□□ -0.58
UPK3B-203ENST00000394849 E9PLD3 99 aa11.42□□□□□ -0.58
UPK3B-203ENST00000394849 VPREB1P12018 145 aa11.42□□□□□ -0.58
UPK3B-203ENST00000394849 KRTAP13-2Q52LG2 175 aa11.42□□□□□ -0.58
UPK3B-203ENST00000394849 MIR7-3HGQ8N6C7 128 aa11.42□□□□□ -0.58
UPK3B-203ENST00000394849 C20orf202A1L168 122 aa11.41□□□□□ -0.58
UPK3B-203ENST00000394849 LCE2DQ5TA82 110 aaPredicted RBP11.41□□□□□ -0.58
UPK3B-203ENST00000394849 ANAPC11Q9NYG5 84 aa11.4□□□□□ -0.58
UPK3B-203ENST00000394849 IGKV2D-26A0A0A0MRZ7 120 aa11.39□□□□□ -0.59
UPK3B-203ENST00000394849 S100A2P29034 98 aa11.39□□□□□ -0.59
UPK3B-203ENST00000394849 IGKV2-28A0A075B6P5 120 aa11.38□□□□□ -0.59
UPK3B-203ENST00000394849 IGKV2D-28P01615 120 aa11.38□□□□□ -0.59
UPK3B-203ENST00000394849 S100A6P06703 90 aa11.38□□□□□ -0.59
UPK3B-203ENST00000394849 UBE2AP49459 152 aa11.38□□□□□ -0.59
UPK3B-203ENST00000394849 BOD1L2Q8IYS8 172 aa11.38□□□□□ -0.59
UPK3B-203ENST00000394849 LINC01547P58512 204 aaPredicted RBP11.37□□□□□ -0.59
UPK3B-203ENST00000394849 Q8NDZ9 215 aa11.37□□□□□ -0.59
UPK3B-203ENST00000394849 PPDPFQ9H3Y8 114 aa11.37□□□□□ -0.59
UPK3B-203ENST00000394849 KRTAP13-1Q8IUC0 172 aa11.36□□□□□ -0.59
UPK3B-203ENST00000394849 HIST3H2BBQ8N257 126 aa11.35□□□□□ -0.59
UPK3B-203ENST00000394849 DAND5Q8N907 189 aa11.35□□□□□ -0.59
UPK3B-203ENST00000394849 MIEN1Q9BRT3 115 aa11.34□□□□□ -0.59
UPK3B-203ENST00000394849 M0R378 163 aa11.33□□□□□ -0.6
UPK3B-203ENST00000394849 CRCT1Q9UGL9 99 aa11.33□□□□□ -0.6
UPK3B-203ENST00000394849 A0A0J9YXY3 114 aa11.32□□□□□ -0.6
UPK3B-203ENST00000394849 AKR1D1P51857 326 aa11.32□□□□□ -0.6
UPK3B-203ENST00000394849 NCR3O14931 201 aa11.31□□□□□ -0.6
UPK3B-203ENST00000394849 SPAG11AQ6PDA7 123 aa11.31□□□□□ -0.6
UPK3B-203ENST00000394849 FP248Q71RG6 208 aaPredicted RBP11.31□□□□□ -0.6
UPK3B-203ENST00000394849 ATOH7Q8N100 152 aa11.31□□□□□ -0.6
UPK3B-203ENST00000394849 HIST1H2BLQ99880 126 aa11.31□□□□□ -0.6
UPK3B-203ENST00000394849 ZNF815PA8K554 130 aa11.3□□□□□ -0.6
UPK3B-203ENST00000394849 TMEM238C9JI98 176 aa11.29□□□□□ -0.6
UPK3B-203ENST00000394849 LINC00337Q8N6G1 96 aa11.29□□□□□ -0.6
UPK3B-203ENST00000394849 TMEM126AQ9H061 195 aa11.29□□□□□ -0.6
UPK3B-203ENST00000394849 NPC2P61916 151 aa11.28□□□□□ -0.6
UPK3B-203ENST00000394849 FAM19A1Q7Z5A9 133 aa11.28□□□□□ -0.6
UPK3B-203ENST00000394849 LOC107984156A0A0G2JMH3 177 aa11.27□□□□□ -0.61
UPK3B-203ENST00000394849 SNRPEP62304 92 aaKnown RBP11.27□□□□□ -0.61
UPK3B-203ENST00000394849 ASB16-AS1Q495Z4 193 aa11.27□□□□□ -0.61
UPK3B-203ENST00000394849 ARL17AQ8IVW1 177 aa11.27□□□□□ -0.61
UPK3B-203ENST00000394849 TTTY13Q9BZ97 58 aa11.27□□□□□ -0.61
UPK3B-203ENST00000394849 FSIP2Q5CZC0 6907 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms