RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CXCL5P42830 114 aa9.11□□□□□ -0.95
GTF2F1-201ENST00000394456 C6orf99Q4VX62 202 aa9.11□□□□□ -0.95
GTF2F1-201ENST00000394456 OBSCN-AS1Q96MR7 158 aa9.11□□□□□ -0.95
GTF2F1-201ENST00000394456 KLK5Q9Y337 293 aaPredicted RBP9.11□□□□□ -0.95
GTF2F1-201ENST00000394456 A0A087WVE0 104 aa9.11□□□□□ -0.95
GTF2F1-201ENST00000394456 SPAG11BQ08648 103 aa9.1□□□□□ -0.95
GTF2F1-201ENST00000394456 ENHOQ6UWT2 76 aa9.09□□□□□ -0.95
GTF2F1-201ENST00000394456 Q8N814 137 aa9.09□□□□□ -0.95
GTF2F1-201ENST00000394456 ORMDL1Q9P0S3 153 aa9.09□□□□□ -0.95
GTF2F1-201ENST00000394456 XAGE1AQ9HD64 81 aa9.08□□□□□ -0.96
GTF2F1-201ENST00000394456 EGFEM1PQ0D2K5 195 aa9.08□□□□□ -0.96
GTF2F1-201ENST00000394456 RPL18AQ02543 176 aaKnown RBP9.07□□□□□ -0.96
GTF2F1-201ENST00000394456 LINC01561Q8N1V8 128 aa9.07□□□□□ -0.96
GTF2F1-201ENST00000394456 IMUPQ9GZP8 106 aa9.06□□□□□ -0.96
GTF2F1-201ENST00000394456 PRB2P02812 416 aaPredicted RBP9.05□□□□□ -0.96
GTF2F1-201ENST00000394456 TMEM126AQ9H061 195 aa9.05□□□□□ -0.96
GTF2F1-201ENST00000394456 HIGD2BQ4VC39 106 aa9.05□□□□□ -0.96
GTF2F1-201ENST00000394456 S100A7L2Q5SY68 101 aa9.05□□□□□ -0.96
GTF2F1-201ENST00000394456 LELP1Q5T871 98 aa9.05□□□□□ -0.96
GTF2F1-201ENST00000394456 WFDC10BQ8IUB3 73 aa9.05□□□□□ -0.96
GTF2F1-201ENST00000394456 M0R2N4 97 aa9.04□□□□□ -0.96
GTF2F1-201ENST00000394456 LINC00167Q96N53 147 aa9.04□□□□□ -0.96
GTF2F1-201ENST00000394456 NDUFC2O95298 119 aa9.04□□□□□ -0.96
GTF2F1-201ENST00000394456 Q6ZTC4 211 aa9.04□□□□□ -0.96
GTF2F1-201ENST00000394456 COX17Q14061 63 aa9.03□□□□□ -0.96
GTF2F1-201ENST00000394456 LYPD5Q6UWN5 251 aa9.03□□□□□ -0.96
GTF2F1-201ENST00000394456 C6orf48Q9UBA6 75 aa9.03□□□□□ -0.96
GTF2F1-201ENST00000394456 MGAM2Q2M2H8 2515 aa9.03□□□□□ -0.96
GTF2F1-201ENST00000394456 PRR34Q9NV39 138 aa9.03□□□□□ -0.96
GTF2F1-201ENST00000394456 DNAH3Q8TD57 4116 aa9.02□□□□□ -0.96
GTF2F1-201ENST00000394456 CYSTM1Q9H1C7 97 aa9.02□□□□□ -0.97
GTF2F1-201ENST00000394456 A0A0J9YWU9 116 aa9.02□□□□□ -0.97
GTF2F1-201ENST00000394456 CCKP06307 115 aa9.02□□□□□ -0.97
GTF2F1-201ENST00000394456 KPRPQ5T749 579 aaPredicted RBP9.01□□□□□ -0.97
GTF2F1-201ENST00000394456 LINC00575Q6W349 94 aa9.01□□□□□ -0.97
GTF2F1-201ENST00000394456 SMIM20Q8N5G0 67 aa9.01□□□□□ -0.97
GTF2F1-201ENST00000394456 TRBV10-3A0A0K0K1G6 114 aa9□□□□□ -0.97
GTF2F1-201ENST00000394456 C2orf48Q96LS8 159 aa9□□□□□ -0.97
GTF2F1-201ENST00000394456 C9orf153Q5TBE3 101 aa8.99□□□□□ -0.97
GTF2F1-201ENST00000394456 HIST1H4AP62805 103 aaKnown RBP8.99□□□□□ -0.97
GTF2F1-201ENST00000394456 C3orf22Q8N5N4 141 aa8.99□□□□□ -0.97
GTF2F1-201ENST00000394456 Q6JHZ5 121 aa8.98□□□□□ -0.97
GTF2F1-201ENST00000394456 FAM19A1Q7Z5A9 133 aa8.98□□□□□ -0.97
GTF2F1-201ENST00000394456 TMEM256-PLSCR3K7ERE1 68 aa8.97□□□□□ -0.97
GTF2F1-201ENST00000394456 IGLV6-57P01721 117 aa8.97□□□□□ -0.97
GTF2F1-201ENST00000394456 Q6ZQY7 126 aa8.97□□□□□ -0.97
GTF2F1-201ENST00000394456 hADV29S1A0JD25 119 aa8.96□□□□□ -0.97
GTF2F1-201ENST00000394456 A0A1B0GX51 115 aa8.96□□□□□ -0.98
GTF2F1-201ENST00000394456 MRAPQ8TCY5 172 aa8.96□□□□□ -0.98
GTF2F1-201ENST00000394456 KRTAP26-1Q6PEX3 210 aa8.95□□□□□ -0.98
GTF2F1-201ENST00000394456 C11orf45Q8TAV5 145 aa8.95□□□□□ -0.98
GTF2F1-201ENST00000394456 Q6ZRU5 148 aa8.95□□□□□ -0.98
GTF2F1-201ENST00000394456 LAMTOR3Q9UHA4 124 aa8.95□□□□□ -0.98
GTF2F1-201ENST00000394456 DEFB131BA0A096LNP1 70 aa8.94□□□□□ -0.98
GTF2F1-201ENST00000394456 ESRGQ1W209 222 aa8.94□□□□□ -0.98
GTF2F1-201ENST00000394456 JMJD7-PLA2G4BH0Y9G9 81 aa8.94□□□□□ -0.98
GTF2F1-201ENST00000394456 UQCRQO14949 82 aa8.94□□□□□ -0.98
GTF2F1-201ENST00000394456 COX7CP15954 63 aa8.93□□□□□ -0.98
GTF2F1-201ENST00000394456 CAMK2N2Q96S95 79 aa8.93□□□□□ -0.98
GTF2F1-201ENST00000394456 USP17L23D6RBM5 183 aa8.93□□□□□ -0.98
GTF2F1-201ENST00000394456 C15orf56Q8N910 161 aa8.93□□□□□ -0.98
GTF2F1-201ENST00000394456 TRAV23DV6A0A075B6W5 121 aa8.92□□□□□ -0.98
GTF2F1-201ENST00000394456 Q6ZQT0 140 aa8.92□□□□□ -0.98
GTF2F1-201ENST00000394456 H3BNG1 76 aa8.92□□□□□ -0.98
GTF2F1-201ENST00000394456 ZNF561-AS1K7EIQ3 104 aa8.91□□□□□ -0.98
GTF2F1-201ENST00000394456 RBM3P98179 157 aaKnown RBP8.91□□□□□ -0.98
GTF2F1-201ENST00000394456 K7EIL1 84 aa8.9□□□□□ -0.98
GTF2F1-201ENST00000394456 GVQW2A0A096LPI5 108 aaPredicted RBP8.9□□□□□ -0.98
GTF2F1-201ENST00000394456 ATOX1O00244 68 aa8.9□□□□□ -0.98
GTF2F1-201ENST00000394456 VPREB1P12018 145 aa8.9□□□□□ -0.98
GTF2F1-201ENST00000394456 ZNF73O43830 326 aaPredicted RBP8.89□□□□□ -0.99
GTF2F1-201ENST00000394456 COL7A1Q02388 2944 aa8.89□□□□□ -0.99
GTF2F1-201ENST00000394456 DIRC1Q969H9 104 aa8.89□□□□□ -0.99
GTF2F1-201ENST00000394456 HUWE1Q7Z6Z7 4374 aaKnown RBP8.88□□□□□ -0.99
GTF2F1-201ENST00000394456 Q6ZRP5 223 aa8.88□□□□□ -0.99
GTF2F1-201ENST00000394456 STAB2Q8WWQ8 2551 aa8.88□□□□□ -0.99
GTF2F1-201ENST00000394456 IGKV2D-24A0A075B6R9 120 aa8.87□□□□□ -0.99
GTF2F1-201ENST00000394456 LOC107984640A0A0U1RRK4 108 aa8.87□□□□□ -0.99
GTF2F1-201ENST00000394456 SCXQ7RTU7 201 aa8.87□□□□□ -0.99
GTF2F1-201ENST00000394456 COX7BP24311 80 aa8.86□□□□□ -0.99
GTF2F1-201ENST00000394456 UPK3BQ9BT76 320 aa8.86□□□□□ -0.99
GTF2F1-201ENST00000394456 CASC10Q5T4H9 136 aa8.85□□□□□ -0.99
GTF2F1-201ENST00000394456 TM2D3Q9BRN9 247 aa8.85□□□□□ -0.99
GTF2F1-201ENST00000394456 UBL5Q9BZL1 73 aa8.85□□□□□ -0.99
GTF2F1-201ENST00000394456 HAMPP81172 84 aa8.85□□□□□ -0.99
GTF2F1-201ENST00000394456 CRYGAP11844 174 aa8.84□□□□□ -0.99
GTF2F1-201ENST00000394456 SERP2Q8N6R1 65 aa8.84□□□□□ -0.99
GTF2F1-201ENST00000394456 GHRHP01286 108 aa8.84□□□□□ -0.99
GTF2F1-201ENST00000394456 ELOF1P60002 83 aaKnown RBP8.84□□□□□ -0.99
GTF2F1-201ENST00000394456 Q6ZVQ6 151 aa8.84□□□□□ -0.99
GTF2F1-201ENST00000394456 SERTAD4-AS1Q5TG53 156 aa8.83□□□□□ -1
GTF2F1-201ENST00000394456 DSCR8Q96T75 97 aa8.83□□□□□ -1
GTF2F1-201ENST00000394456 LOC110117498A0A087WWA1 95 aa8.83□□□□□ -1
GTF2F1-201ENST00000394456 MUC7Q8TAX7 377 aa8.83□□□□□ -1
GTF2F1-201ENST00000394456 MDFIQ99750 246 aa8.83□□□□□ -1
GTF2F1-201ENST00000394456 C1orf43Q9BWL3 253 aa8.83□□□□□ -1
GTF2F1-201ENST00000394456 NDUFC2-KCTD14E9PQ53 114 aa8.82□□□□□ -1
GTF2F1-201ENST00000394456 TRAV10A0A0B4J240 114 aa8.82□□□□□ -1
GTF2F1-201ENST00000394456 LINC01547P58512 204 aaPredicted RBP8.82□□□□□ -1
GTF2F1-201ENST00000394456 LINC01556Q5JQF7 62 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms