RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 LINC00588Q9Y4M8 146 aa9.85□□□□□ -0.83
PPARGC1B-203ENST00000394320 BRK1Q8WUW1 75 aa9.85□□□□□ -0.83
PPARGC1B-203ENST00000394320 LINC00208Q96KT6 92 aa9.85□□□□□ -0.83
PPARGC1B-203ENST00000394320 LINC01547P58512 204 aaPredicted RBP9.85□□□□□ -0.83
PPARGC1B-203ENST00000394320 MPLKIPQ8TAP9 179 aa9.84□□□□□ -0.83
PPARGC1B-203ENST00000394320 FLNBO75369 2602 aaKnown RBP9.84□□□□□ -0.83
PPARGC1B-203ENST00000394320 ELOF1P60002 83 aaKnown RBP9.84□□□□□ -0.83
PPARGC1B-203ENST00000394320 LINC00846Q9NV44 126 aa9.83□□□□□ -0.84
PPARGC1B-203ENST00000394320 C16orf90A8MZG2 172 aa9.82□□□□□ -0.84
PPARGC1B-203ENST00000394320 CCDC179H3BU77 68 aa9.82□□□□□ -0.84
PPARGC1B-203ENST00000394320 A0A087WVE0 104 aa9.82□□□□□ -0.84
PPARGC1B-203ENST00000394320 KIAA0087Q14695 138 aa9.82□□□□□ -0.84
PPARGC1B-203ENST00000394320 SOSTDC1Q6X4U4 206 aa9.82□□□□□ -0.84
PPARGC1B-203ENST00000394320 WWC2-AS2Q96NR7 200 aa9.81□□□□□ -0.84
PPARGC1B-203ENST00000394320 HCG22E2RYF7 251 aa9.81□□□□□ -0.84
PPARGC1B-203ENST00000394320 C19orf73Q9NVV2 129 aa9.81□□□□□ -0.84
PPARGC1B-203ENST00000394320 TRBV7-7A0A0K0K1E9 115 aa9.79□□□□□ -0.84
PPARGC1B-203ENST00000394320 SMIM26A0A096LP01 95 aa9.79□□□□□ -0.84
PPARGC1B-203ENST00000394320 Q6ZRX8 168 aa9.79□□□□□ -0.84
PPARGC1B-203ENST00000394320 SPATA3Q8NHX4 192 aa9.78□□□□□ -0.84
PPARGC1B-203ENST00000394320 BCE1O60756 84 aa9.78□□□□□ -0.84
PPARGC1B-203ENST00000394320 PRR4Q16378 134 aa9.77□□□□□ -0.84
PPARGC1B-203ENST00000394320 RTL8CO15255 209 aa9.77□□□□□ -0.85
PPARGC1B-203ENST00000394320 LINC00612Q8N6U2 182 aa9.77□□□□□ -0.85
PPARGC1B-203ENST00000394320 Q6ZRP5 223 aa9.76□□□□□ -0.85
PPARGC1B-203ENST00000394320 H0Y9P7 68 aa9.75□□□□□ -0.85
PPARGC1B-203ENST00000394320 hDV103S1A0JD37 113 aa9.74□□□□□ -0.85
PPARGC1B-203ENST00000394320 HECTD1Q9ULT8 2610 aa9.74□□□□□ -0.85
PPARGC1B-203ENST00000394320 LOC110117498A0A087WWA1 95 aa9.74□□□□□ -0.85
PPARGC1B-203ENST00000394320 KRTAP1-3Q8IUG1 177 aa9.73□□□□□ -0.85
PPARGC1B-203ENST00000394320 Q8NBF4 154 aa9.73□□□□□ -0.85
PPARGC1B-203ENST00000394320 TMEM254Q8TBM7 123 aa9.73□□□□□ -0.85
PPARGC1B-203ENST00000394320 K7EIL1 84 aa9.73□□□□□ -0.85
PPARGC1B-203ENST00000394320 TP53AIP1Q9HCN2 124 aa9.73□□□□□ -0.85
PPARGC1B-203ENST00000394320 PRR34Q9NV39 138 aa9.72□□□□□ -0.85
PPARGC1B-203ENST00000394320 LITAFQ99732 161 aa9.72□□□□□ -0.85
PPARGC1B-203ENST00000394320 A6NED7 52 aa9.72□□□□□ -0.85
PPARGC1B-203ENST00000394320 GOLGB1Q14789 3259 aaKnown RBP9.71□□□□□ -0.85
PPARGC1B-203ENST00000394320 FAM218AQ96MZ4 157 aa9.71□□□□□ -0.85
PPARGC1B-203ENST00000394320 CRYGAP11844 174 aa9.71□□□□□ -0.85
PPARGC1B-203ENST00000394320 PRO0461Q9UI25 63 aa9.71□□□□□ -0.85
PPARGC1B-203ENST00000394320 VPREB1P12018 145 aa9.71□□□□□ -0.86
PPARGC1B-203ENST00000394320 MOBPQ13875 183 aa9.71□□□□□ -0.86
PPARGC1B-203ENST00000394320 GIG44P09565 113 aaPredicted RBP9.71□□□□□ -0.86
PPARGC1B-203ENST00000394320 PHF5AQ7RTV0 110 aaKnown RBP9.7□□□□□ -0.86
PPARGC1B-203ENST00000394320 CDIP1Q9H305 208 aa9.7□□□□□ -0.86
PPARGC1B-203ENST00000394320 IGLV6-57P01721 117 aa9.7□□□□□ -0.86
PPARGC1B-203ENST00000394320 KRTAP10-11P60412 298 aa9.7□□□□□ -0.86
PPARGC1B-203ENST00000394320 SMCPP49901 116 aaPredicted RBP9.7□□□□□ -0.86
PPARGC1B-203ENST00000394320 FAM229AH3BQW9 127 aa9.69□□□□□ -0.86
PPARGC1B-203ENST00000394320 EPM2AB3EWF7 344 aa9.69□□□□□ -0.86
PPARGC1B-203ENST00000394320 DEFB116Q30KQ4 102 aa9.69□□□□□ -0.86
PPARGC1B-203ENST00000394320 Q6ZQT0 140 aa9.68□□□□□ -0.86
PPARGC1B-203ENST00000394320 KRTAP10-3P60369 221 aa9.67□□□□□ -0.86
PPARGC1B-203ENST00000394320 LINC00476Q8WZB0 136 aa9.67□□□□□ -0.86
PPARGC1B-203ENST00000394320 KRTAP1-1Q07627 177 aa9.67□□□□□ -0.86
PPARGC1B-203ENST00000394320 SVIPQ8NHG7 77 aa9.66□□□□□ -0.86
PPARGC1B-203ENST00000394320 TM2D3Q9BRN9 247 aa9.65□□□□□ -0.86
PPARGC1B-203ENST00000394320 PRRC2CQ9Y520 2896 aaKnown RBP9.65□□□□□ -0.87
PPARGC1B-203ENST00000394320 PCOTHQ58A44 107 aa9.64□□□□□ -0.87
PPARGC1B-203ENST00000394320 KCNQ1DNQ9H478 68 aa9.64□□□□□ -0.87
PPARGC1B-203ENST00000394320 H3BPC8 53 aa9.64□□□□□ -0.87
PPARGC1B-203ENST00000394320 C1orf64Q8NEQ6 169 aa9.64□□□□□ -0.87
PPARGC1B-203ENST00000394320 TRBV7-4A0A0J9YYF1 115 aa9.63□□□□□ -0.87
PPARGC1B-203ENST00000394320 SPACA4Q8TDM5 124 aa9.62□□□□□ -0.87
PPARGC1B-203ENST00000394320 IGLV1-50A0A075B6I6 118 aa9.61□□□□□ -0.87
PPARGC1B-203ENST00000394320 SMIM29Q86T20 159 aa9.61□□□□□ -0.87
PPARGC1B-203ENST00000394320 TLX1NBP0CAT3 122 aa9.6□□□□□ -0.87
PPARGC1B-203ENST00000394320 TYMSOSQ8TAI1 123 aa9.6□□□□□ -0.87
PPARGC1B-203ENST00000394320 CHTF8P0CG12 524 aa9.58□□□□□ -0.88
PPARGC1B-203ENST00000394320 PLA2G2DQ9UNK4 145 aa9.58□□□□□ -0.88
PPARGC1B-203ENST00000394320 ST20-AS1Q8NBB2 130 aa9.58□□□□□ -0.88
PPARGC1B-203ENST00000394320 MGAM2Q2M2H8 2515 aa9.57□□□□□ -0.88
PPARGC1B-203ENST00000394320 PLA2G1BP04054 148 aaKnown RBP9.57□□□□□ -0.88
PPARGC1B-203ENST00000394320 LINC00528Q8N1L1 170 aa9.57□□□□□ -0.88
PPARGC1B-203ENST00000394320 C15orf56Q8N910 161 aa9.57□□□□□ -0.88
PPARGC1B-203ENST00000394320 RETNLBQ9BQ08 111 aa9.57□□□□□ -0.88
PPARGC1B-203ENST00000394320 HELZ2Q9BYK8 2649 aaKnown RBP9.56□□□□□ -0.88
PPARGC1B-203ENST00000394320 SERTAD4-AS1Q5TG53 156 aa9.55□□□□□ -0.88
PPARGC1B-203ENST00000394320 FLNAP21333 2647 aaKnown RBP9.55□□□□□ -0.88
PPARGC1B-203ENST00000394320 C8orf87E5RJ46 101 aa9.55□□□□□ -0.88
PPARGC1B-203ENST00000394320 IGKV2D-30A0A075B6S6 120 aa9.54□□□□□ -0.88
PPARGC1B-203ENST00000394320 IGKV2-30P06310 120 aa9.54□□□□□ -0.88
PPARGC1B-203ENST00000394320 C9orf163Q8N9P6 203 aa9.54□□□□□ -0.88
PPARGC1B-203ENST00000394320 USP24Q9UPU5 2620 aa9.54□□□□□ -0.88
PPARGC1B-203ENST00000394320 DNAH12Q6ZR08 3092 aa9.54□□□□□ -0.88
PPARGC1B-203ENST00000394320 LINC00313P59037 77 aa9.53□□□□□ -0.88
PPARGC1B-203ENST00000394320 FAM168BA1KXE4 195 aa9.52□□□□□ -0.89
PPARGC1B-203ENST00000394320 RPL37AP61513 92 aaKnown RBP9.51□□□□□ -0.89
PPARGC1B-203ENST00000394320 A0A087WTM6 91 aa9.51□□□□□ -0.89
PPARGC1B-203ENST00000394320 A0A0U1RQV1 116 aa9.51□□□□□ -0.89
PPARGC1B-203ENST00000394320 TRAV22A0A0B4J277 110 aa9.51□□□□□ -0.89
PPARGC1B-203ENST00000394320 SSBP3-AS1Q7Z2R9 100 aa9.51□□□□□ -0.89
PPARGC1B-203ENST00000394320 ACYP2P14621 99 aa9.49□□□□□ -0.89
PPARGC1B-203ENST00000394320 A8MWP4 228 aa9.49□□□□□ -0.89
PPARGC1B-203ENST00000394320 WIPF1O43516 503 aa9.49□□□□□ -0.89
PPARGC1B-203ENST00000394320 ITPR3Q14573 2671 aa9.49□□□□□ -0.89
PPARGC1B-203ENST00000394320 SPINK1P00995 79 aa9.48□□□□□ -0.89
PPARGC1B-203ENST00000394320 APLNQ9ULZ1 77 aa9.48□□□□□ -0.89
PPARGC1B-203ENST00000394320 CNBPP62633 177 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms