RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 ANAPC11Q9NYG5 84 aa10.74□□□□□ -0.69
PDLIM7-205ENST00000393551 H3BRM9 83 aa10.73□□□□□ -0.69
PDLIM7-205ENST00000393551 ZNF22P17026 224 aaPredicted RBP10.73□□□□□ -0.69
PDLIM7-205ENST00000393551 TSPAN13O95857 204 aa10.72□□□□□ -0.69
PDLIM7-205ENST00000393551 LOC105371267A0A1B0GV96 52 aa10.71□□□□□ -0.69
PDLIM7-205ENST00000393551 ATP5LO75964 103 aa10.71□□□□□ -0.69
PDLIM7-205ENST00000393551 PFN2P35080 140 aa10.71□□□□□ -0.69
PDLIM7-205ENST00000393551 PMCHL1Q16048 86 aa10.71□□□□□ -0.69
PDLIM7-205ENST00000393551 HIST1H2BLQ99880 126 aa10.71□□□□□ -0.69
PDLIM7-205ENST00000393551 IGKV2-28A0A075B6P5 120 aa10.7□□□□□ -0.7
PDLIM7-205ENST00000393551 IGKV2D-28P01615 120 aa10.7□□□□□ -0.7
PDLIM7-205ENST00000393551 CRYGAP11844 174 aa10.7□□□□□ -0.7
PDLIM7-205ENST00000393551 KRTAP13-2Q52LG2 175 aa10.7□□□□□ -0.7
PDLIM7-205ENST00000393551 NKAPP1Q8N9T2 125 aa10.7□□□□□ -0.7
PDLIM7-205ENST00000393551 Q8NDZ9 215 aa10.7□□□□□ -0.7
PDLIM7-205ENST00000393551 HBDP02042 147 aa10.69□□□□□ -0.7
PDLIM7-205ENST00000393551 VPREB1P12018 145 aa10.69□□□□□ -0.7
PDLIM7-205ENST00000393551 SND1-IT1Q9HBX3 110 aa10.69□□□□□ -0.7
PDLIM7-205ENST00000393551 HSPB8Q9UJY1 196 aa10.69□□□□□ -0.7
PDLIM7-205ENST00000393551 FABP4P15090 132 aa10.68□□□□□ -0.7
PDLIM7-205ENST00000393551 TYMSOSQ8TAI1 123 aa10.68□□□□□ -0.7
PDLIM7-205ENST00000393551 ERG28Q9UKR5 140 aa10.68□□□□□ -0.7
PDLIM7-205ENST00000393551 C11orf86A6NJI1 115 aa10.67□□□□□ -0.7
PDLIM7-205ENST00000393551 LEPROTL1O95214 131 aa10.67□□□□□ -0.7
PDLIM7-205ENST00000393551 ZNF625Q96I27 306 aaPredicted RBP10.67□□□□□ -0.7
PDLIM7-205ENST00000393551 UBE2AP49459 152 aa10.66□□□□□ -0.7
PDLIM7-205ENST00000393551 FAM19A2Q8N3H0 131 aa10.66□□□□□ -0.7
PDLIM7-205ENST00000393551 TMEM238C9JI98 176 aa10.65□□□□□ -0.7
PDLIM7-205ENST00000393551 PRLHP81277 87 aa10.65□□□□□ -0.7
PDLIM7-205ENST00000393551 COX17Q14061 63 aa10.64□□□□□ -0.71
PDLIM7-205ENST00000393551 TMEM126AQ9H061 195 aa10.64□□□□□ -0.71
PDLIM7-205ENST00000393551 AKR1D1P51857 326 aa10.63□□□□□ -0.71
PDLIM7-205ENST00000393551 M0R378 163 aa10.62□□□□□ -0.71
PDLIM7-205ENST00000393551 FAM229BQ4G0N7 80 aa10.62□□□□□ -0.71
PDLIM7-205ENST00000393551 MAP1LC3CQ9BXW4 147 aa10.62□□□□□ -0.71
PDLIM7-205ENST00000393551 TMEM170BQ5T4T1 132 aa10.61□□□□□ -0.71
PDLIM7-205ENST00000393551 FAM19A1Q7Z5A9 133 aa10.6□□□□□ -0.71
PDLIM7-205ENST00000393551 IFI27L1Q96BM0 104 aa10.6□□□□□ -0.71
PDLIM7-205ENST00000393551 RPL24P83731 157 aaKnown RBP10.59□□□□□ -0.71
PDLIM7-205ENST00000393551 PET117Q6UWS5 81 aa10.59□□□□□ -0.71
PDLIM7-205ENST00000393551 MUC17Q685J3 4493 aa10.58□□□□□ -0.72
PDLIM7-205ENST00000393551 JOSD1Q15040 202 aaPredicted RBP10.58□□□□□ -0.72
PDLIM7-205ENST00000393551 RETNLBQ9BQ08 111 aa10.58□□□□□ -0.72
PDLIM7-205ENST00000393551 CHTOPQ9Y3Y2 248 aaKnown RBP10.58□□□□□ -0.72
PDLIM7-205ENST00000393551 TMEM223A0PJW6 202 aa10.57□□□□□ -0.72
PDLIM7-205ENST00000393551 C20orf202A1L168 122 aa10.57□□□□□ -0.72
PDLIM7-205ENST00000393551 C3orf79P0CE67 100 aa10.57□□□□□ -0.72
PDLIM7-205ENST00000393551 KRTDAPP60985 99 aa10.57□□□□□ -0.72
PDLIM7-205ENST00000393551 LINC00304Q8N9R0 145 aa10.57□□□□□ -0.72
PDLIM7-205ENST00000393551 PLEKHB2Q96CS7 222 aa10.57□□□□□ -0.72
PDLIM7-205ENST00000393551 SYS1-DBNDD2H3BUS1 97 aa10.56□□□□□ -0.72
PDLIM7-205ENST00000393551 SMIM6P0DI80 62 aa10.56□□□□□ -0.72
PDLIM7-205ENST00000393551 SFTA2Q6UW10 78 aa10.56□□□□□ -0.72
PDLIM7-205ENST00000393551 TRAV12-1A0A0B4J245 112 aa10.55□□□□□ -0.72
PDLIM7-205ENST00000393551 A0A0U1RRA0 63 aa10.55□□□□□ -0.72
PDLIM7-205ENST00000393551 LINC00158P58513 81 aa10.54□□□□□ -0.72
PDLIM7-205ENST00000393551 IGKV2D-26A0A0A0MRZ7 120 aa10.53□□□□□ -0.72
PDLIM7-205ENST00000393551 C3orf22Q8N5N4 141 aa10.53□□□□□ -0.72
PDLIM7-205ENST00000393551 SCGB1D1O95968 90 aa10.52□□□□□ -0.73
PDLIM7-205ENST00000393551 LINC01545Q5VT33 79 aa10.52□□□□□ -0.73
PDLIM7-205ENST00000393551 FAT4Q6V0I7 4981 aa10.51□□□□□ -0.73
PDLIM7-205ENST00000393551 SMIM13P0DJ93 91 aa10.51□□□□□ -0.73
PDLIM7-205ENST00000393551 PYY3Q5JQD4 70 aa10.51□□□□□ -0.73
PDLIM7-205ENST00000393551 HIGD2AQ9BW72 106 aa10.51□□□□□ -0.73
PDLIM7-205ENST00000393551 SPRR4Q96PI1 79 aa10.48□□□□□ -0.73
PDLIM7-205ENST00000393551 PLNP26678 52 aa10.47□□□□□ -0.73
PDLIM7-205ENST00000393551 S100A12P80511 92 aa10.47□□□□□ -0.73
PDLIM7-205ENST00000393551 LINC00518Q8N0U6 118 aa10.47□□□□□ -0.73
PDLIM7-205ENST00000393551 MIR7-3HGQ8N6C7 128 aa10.47□□□□□ -0.73
PDLIM7-205ENST00000393551 KRTAP4-16G5E9R7 235 aaPredicted RBP10.46□□□□□ -0.73
PDLIM7-205ENST00000393551 SPRR1AP35321 89 aa10.46□□□□□ -0.73
PDLIM7-205ENST00000393551 BOD1L2Q8IYS8 172 aa10.46□□□□□ -0.73
PDLIM7-205ENST00000393551 H0Y8G0 127 aa10.45□□□□□ -0.74
PDLIM7-205ENST00000393551 NCR3O14931 201 aa10.45□□□□□ -0.74
PDLIM7-205ENST00000393551 DPM2O94777 84 aa10.45□□□□□ -0.74
PDLIM7-205ENST00000393551 CTAG1AP78358 180 aa10.45□□□□□ -0.74
PDLIM7-205ENST00000393551 TPRXLQ17RH7 258 aa10.45□□□□□ -0.74
PDLIM7-205ENST00000393551 IGLV7-46A0A075B6I9 117 aa10.44□□□□□ -0.74
PDLIM7-205ENST00000393551 MEIG1Q5JSS6 88 aa10.44□□□□□ -0.74
PDLIM7-205ENST00000393551 C12orf57Q99622 126 aa10.44□□□□□ -0.74
PDLIM7-205ENST00000393551 KCNQ1DNQ9H478 68 aa10.44□□□□□ -0.74
PDLIM7-205ENST00000393551 NDUFA12Q9UI09 145 aa10.44□□□□□ -0.74
PDLIM7-205ENST00000393551 PRYO14603 147 aa10.43□□□□□ -0.74
PDLIM7-205ENST00000393551 IGKCP01834 107 aa10.43□□□□□ -0.74
PDLIM7-205ENST00000393551 TSPEAR-AS2P59090 65 aa10.43□□□□□ -0.74
PDLIM7-205ENST00000393551 HSBP1L1C9JCN9 74 aa10.42□□□□□ -0.74
PDLIM7-205ENST00000393551 HERV-K104P63124 156 aa10.42□□□□□ -0.74
PDLIM7-205ENST00000393551 LINC00337Q8N6G1 96 aa10.42□□□□□ -0.74
PDLIM7-205ENST00000393551 TRBV10-3A0A0K0K1G6 114 aa10.41□□□□□ -0.74
PDLIM7-205ENST00000393551 VAMP8Q9BV40 100 aa10.41□□□□□ -0.74
PDLIM7-205ENST00000393551 LCE2AQ5TA79 106 aaPredicted RBP10.4□□□□□ -0.74
PDLIM7-205ENST00000393551 SMCR5Q8TEV8 140 aa10.4□□□□□ -0.74
PDLIM7-205ENST00000393551 CDIP1Q9H305 208 aa10.4□□□□□ -0.74
PDLIM7-205ENST00000393551 DAND5Q8N907 189 aa10.39□□□□□ -0.75
PDLIM7-205ENST00000393551 LOC107984156A0A0G2JMH3 177 aa10.38□□□□□ -0.75
PDLIM7-205ENST00000393551 A0A0U1RQV1 116 aa10.38□□□□□ -0.75
PDLIM7-205ENST00000393551 MYMXA0A1B0GTQ4 84 aa10.38□□□□□ -0.75
PDLIM7-205ENST00000393551 SPAG11AQ6PDA7 123 aa10.38□□□□□ -0.75
PDLIM7-205ENST00000393551 ARL17AQ8IVW1 177 aa10.38□□□□□ -0.75
PDLIM7-205ENST00000393551 PPDPFQ9H3Y8 114 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms