RNA–Protein interactions for RNA: ENST00000393412.7

MDM2-209, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5 BASIC

Gene MDM2, Length 1,404 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-209ENST00000393412 HIST1H2BKO60814 126 aa9.6□□□□□ -0.87
MDM2-209ENST00000393412 HIST1H2BJP06899 126 aa9.6□□□□□ -0.87
MDM2-209ENST00000393412 HIST1H2BOP23527 126 aa9.6□□□□□ -0.87
MDM2-209ENST00000393412 HIST1H2BBP33778 126 aa9.6□□□□□ -0.87
MDM2-209ENST00000393412 HIST1H2BDP58876 126 aa9.6□□□□□ -0.87
MDM2-209ENST00000393412 HIST1H2BCP62807 126 aa9.6□□□□□ -0.87
MDM2-209ENST00000393412 HIST2H2BEQ16778 126 aa9.6□□□□□ -0.87
MDM2-209ENST00000393412 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.6□□□□□ -0.87
MDM2-209ENST00000393412 HIST1H2BHQ93079 126 aa9.6□□□□□ -0.87
MDM2-209ENST00000393412 HIST1H2BNQ99877 126 aa9.6□□□□□ -0.87
MDM2-209ENST00000393412 HIST1H2BMQ99879 126 aa9.6□□□□□ -0.87
MDM2-209ENST00000393412 RPL37AP8A6NKH3 93 aa9.59□□□□□ -0.87
MDM2-209ENST00000393412 RPL28P46779 137 aaKnown RBP9.59□□□□□ -0.87
MDM2-209ENST00000393412 FAM19A2Q8N3H0 131 aa9.59□□□□□ -0.87
MDM2-209ENST00000393412 GAGE10A6NGK3 116 aa9.57□□□□□ -0.88
MDM2-209ENST00000393412 PRR4Q16378 134 aa9.57□□□□□ -0.88
MDM2-209ENST00000393412 SERF1AO75920 110 aa9.56□□□□□ -0.88
MDM2-209ENST00000393412 VPREB1P12018 145 aa9.56□□□□□ -0.88
MDM2-209ENST00000393412 LINC00310P59036 64 aa9.56□□□□□ -0.88
MDM2-209ENST00000393412 RPL24P83731 157 aaKnown RBP9.56□□□□□ -0.88
MDM2-209ENST00000393412 XP32Q5T750 250 aa9.56□□□□□ -0.88
MDM2-209ENST00000393412 LEPROTL1O95214 131 aa9.56□□□□□ -0.88
MDM2-209ENST00000393412 KRTAP13-1Q8IUC0 172 aa9.54□□□□□ -0.88
MDM2-209ENST00000393412 LINC00158P58513 81 aa9.53□□□□□ -0.88
MDM2-209ENST00000393412 HSPB8Q9UJY1 196 aa9.53□□□□□ -0.88
MDM2-209ENST00000393412 IGKV2-28A0A075B6P5 120 aa9.52□□□□□ -0.89
MDM2-209ENST00000393412 IGKV2D-28P01615 120 aa9.52□□□□□ -0.89
MDM2-209ENST00000393412 HERV-K104P63124 156 aa9.52□□□□□ -0.89
MDM2-209ENST00000393412 PLNP26678 52 aa9.51□□□□□ -0.89
MDM2-209ENST00000393412 Q8NDZ9 215 aa9.51□□□□□ -0.89
MDM2-209ENST00000393412 LINC00587B1AMM8 73 aa9.5□□□□□ -0.89
MDM2-209ENST00000393412 H0Y8G0 127 aa9.49□□□□□ -0.89
MDM2-209ENST00000393412 TSPAN13O95857 204 aa9.49□□□□□ -0.89
MDM2-209ENST00000393412 UBE2AP49459 152 aa9.49□□□□□ -0.89
MDM2-209ENST00000393412 COA6Q5JTJ3 125 aaKnown RBP9.49□□□□□ -0.89
MDM2-209ENST00000393412 NDUFA12Q9UI09 145 aa9.49□□□□□ -0.89
MDM2-209ENST00000393412 S100A6P06703 90 aa9.48□□□□□ -0.89
MDM2-209ENST00000393412 SMIM13P0DJ93 91 aa9.48□□□□□ -0.89
MDM2-209ENST00000393412 CRYGAP11844 174 aa9.48□□□□□ -0.89
MDM2-209ENST00000393412 TMEM126AQ9H061 195 aa9.48□□□□□ -0.89
MDM2-209ENST00000393412 TMA7Q9Y2S6 64 aaKnown RBP9.48□□□□□ -0.89
MDM2-209ENST00000393412 A0A0U1RRA0 63 aa9.48□□□□□ -0.89
MDM2-209ENST00000393412 MYMXA0A1B0GTQ4 84 aa9.48□□□□□ -0.89
MDM2-209ENST00000393412 FABP4P15090 132 aa9.48□□□□□ -0.89
MDM2-209ENST00000393412 TMEM238C9JI98 176 aa9.47□□□□□ -0.89
MDM2-209ENST00000393412 M0R378 163 aa9.47□□□□□ -0.89
MDM2-209ENST00000393412 LEPROTO15243 131 aa9.47□□□□□ -0.89
MDM2-209ENST00000393412 DPM2O94777 84 aa9.47□□□□□ -0.89
MDM2-209ENST00000393412 MEIG1Q5JSS6 88 aa9.47□□□□□ -0.89
MDM2-209ENST00000393412 TYMSOSQ8TAI1 123 aa9.47□□□□□ -0.89
MDM2-209ENST00000393412 PLEKHB2Q96CS7 222 aa9.47□□□□□ -0.89
MDM2-209ENST00000393412 LPAP08519 4548 aa9.46□□□□□ -0.89
MDM2-209ENST00000393412 A0A087X002 238 aa9.45□□□□□ -0.9
MDM2-209ENST00000393412 SNRPEP62304 92 aaKnown RBP9.45□□□□□ -0.9
MDM2-209ENST00000393412 MIR7-3HGQ8N6C7 128 aa9.45□□□□□ -0.9
MDM2-209ENST00000393412 MAP1LC3CQ9BXW4 147 aa9.45□□□□□ -0.9
MDM2-209ENST00000393412 IGKCP01834 107 aa9.44□□□□□ -0.9
MDM2-209ENST00000393412 TSPEAR-AS2P59090 65 aa9.44□□□□□ -0.9
MDM2-209ENST00000393412 HERVK_113P61574 105 aa9.44□□□□□ -0.9
MDM2-209ENST00000393412 FAM229BQ4G0N7 80 aa9.44□□□□□ -0.9
MDM2-209ENST00000393412 FAM19A1Q7Z5A9 133 aa9.44□□□□□ -0.9
MDM2-209ENST00000393412 BOD1L2Q8IYS8 172 aa9.44□□□□□ -0.9
MDM2-209ENST00000393412 IGKV2D-26A0A0A0MRZ7 120 aa9.43□□□□□ -0.9
MDM2-209ENST00000393412 J3QQQ9 107 aa9.43□□□□□ -0.9
MDM2-209ENST00000393412 NMUP48645 174 aa9.43□□□□□ -0.9
MDM2-209ENST00000393412 PRLHP81277 87 aa9.43□□□□□ -0.9
MDM2-209ENST00000393412 LOC107984156A0A0G2JMH3 177 aa9.42□□□□□ -0.9
MDM2-209ENST00000393412 ARL17AQ8IVW1 177 aa9.42□□□□□ -0.9
MDM2-209ENST00000393412 KRTAP4-8Q9BYQ9 185 aa9.42□□□□□ -0.9
MDM2-209ENST00000393412 C5orf52A6NGY3 159 aa9.41□□□□□ -0.9
MDM2-209ENST00000393412 PMCHL2Q9BQD1 86 aa9.41□□□□□ -0.9
MDM2-209ENST00000393412 HIST3H2BBQ8N257 126 aa9.4□□□□□ -0.9
MDM2-209ENST00000393412 ANAPC11Q9NYG5 84 aa9.4□□□□□ -0.9
MDM2-209ENST00000393412 A0A0U1RQV1 116 aa9.39□□□□□ -0.91
MDM2-209ENST00000393412 PRYO14603 147 aa9.39□□□□□ -0.91
MDM2-209ENST00000393412 S100A2P29034 98 aa9.39□□□□□ -0.91
MDM2-209ENST00000393412 KCNQ1DNQ9H478 68 aa9.39□□□□□ -0.91
MDM2-209ENST00000393412 LGALS3P17931 250 aaKnown RBP9.39□□□□□ -0.91
MDM2-209ENST00000393412 KRTAP13-2Q52LG2 175 aa9.39□□□□□ -0.91
MDM2-209ENST00000393412 SYS1-DBNDD2H3BUS1 97 aa9.38□□□□□ -0.91
MDM2-209ENST00000393412 SPRR1AP35321 89 aa9.38□□□□□ -0.91
MDM2-209ENST00000393412 E9PLD3 99 aa9.37□□□□□ -0.91
MDM2-209ENST00000393412 NCR3O14931 201 aa9.37□□□□□ -0.91
MDM2-209ENST00000393412 LINC00337Q8N6G1 96 aa9.37□□□□□ -0.91
MDM2-209ENST00000393412 HIST1H2BLQ99880 126 aa9.37□□□□□ -0.91
MDM2-209ENST00000393412 TRBV10-2A0A0K0K1G8 114 aa9.36□□□□□ -0.91
MDM2-209ENST00000393412 DAND5Q8N907 189 aa9.36□□□□□ -0.91
MDM2-209ENST00000393412 TRBV10-3A0A0K0K1G6 114 aa9.35□□□□□ -0.91
MDM2-209ENST00000393412 KRTAP4-16G5E9R7 235 aaPredicted RBP9.35□□□□□ -0.91
MDM2-209ENST00000393412 LINC00304Q8N9R0 145 aa9.35□□□□□ -0.91
MDM2-209ENST00000393412 HIGD2AQ9BW72 106 aa9.35□□□□□ -0.91
MDM2-209ENST00000393412 LINC01545Q5VT33 79 aa9.34□□□□□ -0.91
MDM2-209ENST00000393412 S100A12P80511 92 aa9.33□□□□□ -0.92
MDM2-209ENST00000393412 PET117Q6UWS5 81 aa9.33□□□□□ -0.92
MDM2-209ENST00000393412 A0A0J9YXY3 114 aa9.32□□□□□ -0.92
MDM2-209ENST00000393412 NDUFC2O95298 119 aa9.32□□□□□ -0.92
MDM2-209ENST00000393412 KRTDAPP60985 99 aa9.32□□□□□ -0.92
MDM2-209ENST00000393412 CTAG1AP78358 180 aa9.32□□□□□ -0.92
MDM2-209ENST00000393412 MIEN1Q9BRT3 115 aa9.32□□□□□ -0.92
MDM2-209ENST00000393412 SPANXB1Q9NS25 103 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms