RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 CD164Q04900 197 aa11.13□□□□□ -0.63
SHANK1-204ENST00000391814 LINC00167Q96N53 147 aa11.12□□□□□ -0.63
SHANK1-204ENST00000391814 ST20-AS1Q8NBB2 130 aa11.11□□□□□ -0.63
SHANK1-204ENST00000391814 KRTAP10-9P60411 292 aa11.11□□□□□ -0.63
SHANK1-204ENST00000391814 CSPG4Q6UVK1 2322 aa11.11□□□□□ -0.63
SHANK1-204ENST00000391814 C1orf134Q5TEV5 83 aa11.11□□□□□ -0.63
SHANK1-204ENST00000391814 PTPRBP23467 1997 aa11.1□□□□□ -0.63
SHANK1-204ENST00000391814 TRAV22A0A0B4J277 110 aa11.1□□□□□ -0.63
SHANK1-204ENST00000391814 MOBPQ13875 183 aa11.09□□□□□ -0.63
SHANK1-204ENST00000391814 ERC2-IT1O76042 136 aa11.08□□□□□ -0.64
SHANK1-204ENST00000391814 Q8NBF4 154 aa11.08□□□□□ -0.64
SHANK1-204ENST00000391814 ACACBO00763 2458 aa11.07□□□□□ -0.64
SHANK1-204ENST00000391814 K7EQZ3 153 aa11.07□□□□□ -0.64
SHANK1-204ENST00000391814 CYP4F30PQ9H0H9 118 aa11.07□□□□□ -0.64
SHANK1-204ENST00000391814 SONP18583 2426 aaKnown RBP11.06□□□□□ -0.64
SHANK1-204ENST00000391814 A0A1B0GW54 56 aa11.05□□□□□ -0.64
SHANK1-204ENST00000391814 KTN1-AS1Q86SY8 53 aa11.05□□□□□ -0.64
SHANK1-204ENST00000391814 NAV3Q8IVL0 2385 aa11.05□□□□□ -0.64
SHANK1-204ENST00000391814 TRBV7-4A0A0J9YYF1 115 aa11.04□□□□□ -0.64
SHANK1-204ENST00000391814 Q6ZRX8 168 aa11.04□□□□□ -0.64
SHANK1-204ENST00000391814 MUC4Q99102 2169 aa11.04□□□□□ -0.64
SHANK1-204ENST00000391814 H7BZZ5 65 aa11.01□□□□□ -0.65
SHANK1-204ENST00000391814 C16orf95Q9H693 158 aa11.01□□□□□ -0.65
SHANK1-204ENST00000391814 J3QL48 77 aa11□□□□□ -0.65
SHANK1-204ENST00000391814 COL27A1Q8IZC6 1860 aaPredicted RBP11□□□□□ -0.65
SHANK1-204ENST00000391814 HIVEP3Q5T1R4 2406 aa11□□□□□ -0.65
SHANK1-204ENST00000391814 KLKP1Q107X0 134 aa10.99□□□□□ -0.65
SHANK1-204ENST00000391814 A0A1W2PPR1 153 aa10.99□□□□□ -0.65
SHANK1-204ENST00000391814 CHTF8P0CG12 524 aa10.99□□□□□ -0.65
SHANK1-204ENST00000391814 PHF5AQ7RTV0 110 aaKnown RBP10.99□□□□□ -0.65
SHANK1-204ENST00000391814 C10orf142B7Z368 130 aa10.97□□□□□ -0.65
SHANK1-204ENST00000391814 LINC00313P59037 77 aa10.97□□□□□ -0.65
SHANK1-204ENST00000391814 LOC101927531A0A1B0GV80 90 aa10.97□□□□□ -0.65
SHANK1-204ENST00000391814 EIF4EBP3O60516 100 aaPredicted RBP10.97□□□□□ -0.65
SHANK1-204ENST00000391814 ANKHD1Q8IWZ3 2542 aaKnown RBP10.96□□□□□ -0.65
SHANK1-204ENST00000391814 APLNQ9ULZ1 77 aa10.96□□□□□ -0.65
SHANK1-204ENST00000391814 IGLV6-57P01721 117 aa10.95□□□□□ -0.66
SHANK1-204ENST00000391814 LCA10Q71F78 164 aa10.95□□□□□ -0.66
SHANK1-204ENST00000391814 A8MWP4 228 aa10.95□□□□□ -0.66
SHANK1-204ENST00000391814 LINC01600Q96MT4 127 aa10.94□□□□□ -0.66
SHANK1-204ENST00000391814 EPM2AB3EWF7 344 aa10.94□□□□□ -0.66
SHANK1-204ENST00000391814 COX6B2Q6YFQ2 88 aa10.93□□□□□ -0.66
SHANK1-204ENST00000391814 MIR22HGQ0VDD5 57 aa10.93□□□□□ -0.66
SHANK1-204ENST00000391814 PRR15Q8IV56 129 aa10.93□□□□□ -0.66
SHANK1-204ENST00000391814 FAM168BA1KXE4 195 aa10.91□□□□□ -0.66
SHANK1-204ENST00000391814 Q96NJ1 140 aa10.91□□□□□ -0.66
SHANK1-204ENST00000391814 UQCR11O14957 56 aa10.9□□□□□ -0.66
SHANK1-204ENST00000391814 C9orf129Q5T035 196 aaKnown RBP10.9□□□□□ -0.67
SHANK1-204ENST00000391814 DOPEY1Q5JWR5 2465 aa10.89□□□□□ -0.67
SHANK1-204ENST00000391814 Q6ZRP5 223 aa10.89□□□□□ -0.67
SHANK1-204ENST00000391814 FAM229AH3BQW9 127 aa10.87□□□□□ -0.67
SHANK1-204ENST00000391814 CACNA1AO00555 2505 aa10.86□□□□□ -0.67
SHANK1-204ENST00000391814 MRPL34Q9BQ48 92 aaKnown RBP10.85□□□□□ -0.67
SHANK1-204ENST00000391814 C2CD3Q4AC94 2353 aa10.83□□□□□ -0.68
SHANK1-204ENST00000391814 WIPF1O43516 503 aa10.83□□□□□ -0.68
SHANK1-204ENST00000391814 ABCA2Q9BZC7 2435 aa10.83□□□□□ -0.68
SHANK1-204ENST00000391814 CCDC168Q8NDH2 2452 aa10.82□□□□□ -0.68
SHANK1-204ENST00000391814 GVQW2A0A096LPI5 108 aaPredicted RBP10.82□□□□□ -0.68
SHANK1-204ENST00000391814 TYMSOSQ8TAI1 123 aa10.82□□□□□ -0.68
SHANK1-204ENST00000391814 CRIPTQ9P021 101 aa10.82□□□□□ -0.68
SHANK1-204ENST00000391814 IGFL1Q6UW32 110 aa10.81□□□□□ -0.68
SHANK1-204ENST00000391814 NCOR2Q9Y618 2525 aa10.8□□□□□ -0.68
SHANK1-204ENST00000391814 C16orf90A8MZG2 172 aa10.8□□□□□ -0.68
SHANK1-204ENST00000391814 A0A0G2JQZ4 141 aa10.79□□□□□ -0.68
SHANK1-204ENST00000391814 A0A1W2PNN7 141 aa10.79□□□□□ -0.68
SHANK1-204ENST00000391814 NAV2Q8IVL1 2488 aa10.78□□□□□ -0.68
SHANK1-204ENST00000391814 PIEZO2Q9H5I5 2752 aa10.77□□□□□ -0.68
SHANK1-204ENST00000391814 CDC42SE1Q9NRR8 79 aa10.77□□□□□ -0.69
SHANK1-204ENST00000391814 IGLV1-50A0A075B6I6 118 aa10.77□□□□□ -0.69
SHANK1-204ENST00000391814 IGF2RP11717 2491 aa10.76□□□□□ -0.69
SHANK1-204ENST00000391814 DSCR10P59022 87 aa10.75□□□□□ -0.69
SHANK1-204ENST00000391814 LINC00528Q8N1L1 170 aa10.75□□□□□ -0.69
SHANK1-204ENST00000391814 C8orf17Q9NRJ1 99 aa10.74□□□□□ -0.69
SHANK1-204ENST00000391814 RTL8CO15255 209 aa10.74□□□□□ -0.69
SHANK1-204ENST00000391814 MYO18BQ8IUG5 2567 aa10.73□□□□□ -0.69
SHANK1-204ENST00000391814 Q8N377 158 aa10.73□□□□□ -0.69
SHANK1-204ENST00000391814 KCNQ1DNQ9H478 68 aa10.73□□□□□ -0.69
SHANK1-204ENST00000391814 Q5XG85 94 aa10.71□□□□□ -0.69
SHANK1-204ENST00000391814 Q1T7F1 81 aa10.71□□□□□ -0.69
SHANK1-204ENST00000391814 H3BNG1 76 aa10.71□□□□□ -0.7
SHANK1-204ENST00000391814 RBM12B-AS1Q9P1G2 102 aa10.71□□□□□ -0.7
SHANK1-204ENST00000391814 LINC01554Q52M75 96 aa10.7□□□□□ -0.7
SHANK1-204ENST00000391814 A0A0D9SG42 100 aa10.7□□□□□ -0.7
SHANK1-204ENST00000391814 C9orf92A6NGG3 77 aa10.69□□□□□ -0.7
SHANK1-204ENST00000391814 FAM229BQ4G0N7 80 aa10.68□□□□□ -0.7
SHANK1-204ENST00000391814 COL4A2P08572 1712 aa10.68□□□□□ -0.7
SHANK1-204ENST00000391814 LINC00588Q9Y4M8 146 aa10.67□□□□□ -0.7
SHANK1-204ENST00000391814 Q8NAQ8 132 aa10.66□□□□□ -0.7
SHANK1-204ENST00000391814 A0A1B0GVX0 72 aa10.65□□□□□ -0.7
SHANK1-204ENST00000391814 OBSCN-AS1Q96MR7 158 aa10.65□□□□□ -0.7
SHANK1-204ENST00000391814 PCSK5Q92824 1860 aa10.65□□□□□ -0.7
SHANK1-204ENST00000391814 SPANXA2-OT1Q8N9U9 137 aa10.64□□□□□ -0.71
SHANK1-204ENST00000391814 H3BS24 57 aa10.63□□□□□ -0.71
SHANK1-204ENST00000391814 C15orf56Q8N910 161 aa10.6□□□□□ -0.71
SHANK1-204ENST00000391814 KLK9Q2XQG4 91 aa10.6□□□□□ -0.71
SHANK1-204ENST00000391814 CYSTM1Q9H1C7 97 aa10.59□□□□□ -0.71
SHANK1-204ENST00000391814 PIEZO1Q92508 2521 aa10.57□□□□□ -0.72
SHANK1-204ENST00000391814 NBDYA0A0U1RRE5 68 aa10.56□□□□□ -0.72
SHANK1-204ENST00000391814 OCR1Q9BZK8 76 aa10.56□□□□□ -0.72
SHANK1-204ENST00000391814 EP400Q96L91 3159 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms