RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 CCL22O00626 93 aa-1.4□□□□□ -2.63
SNORA40.2-201ENST00000390847 GNGT2O14610 69 aa-1.4□□□□□ -2.63
SNORA40.2-201ENST00000390847 COL4A6Q14031 1691 aa-1.4□□□□□ -2.63
SNORA40.2-201ENST00000390847 SPTY2D1-AS1A0A0U1RR47 76 aa-1.41□□□□□ -2.64
SNORA40.2-201ENST00000390847 KNDC1Q76NI1 1749 aa-1.41□□□□□ -2.64
SNORA40.2-201ENST00000390847 SLIT1O75093 1534 aa-1.41□□□□□ -2.64
SNORA40.2-201ENST00000390847 SPTBN4Q9H254 2564 aa-1.43□□□□□ -2.64
SNORA40.2-201ENST00000390847 C20orf202A1L168 122 aa-1.43□□□□□ -2.64
SNORA40.2-201ENST00000390847 CDKN2A-AS1Q9UH64 79 aa-1.43□□□□□ -2.64
SNORA40.2-201ENST00000390847 KIAA1109Q2LD37 5005 aa-1.43□□□□□ -2.64
SNORA40.2-201ENST00000390847 LRRC37AA6NMS7 1700 aa-1.43□□□□□ -2.64
SNORA40.2-201ENST00000390847 UBR4Q5T4S7 5183 aa-1.43□□□□□ -2.64
SNORA40.2-201ENST00000390847 TOPAZ1Q8N9V7 1692 aa-1.44□□□□□ -2.64
SNORA40.2-201ENST00000390847 TRBV7-7A0A0K0K1E9 115 aa-1.44□□□□□ -2.64
SNORA40.2-201ENST00000390847 UQCRHP07919 91 aa-1.44□□□□□ -2.64
SNORA40.2-201ENST00000390847 MLH3Q9UHC1 1453 aa-1.44□□□□□ -2.64
SNORA40.2-201ENST00000390847 CHD1O14646 1710 aa-1.45□□□□□ -2.64
SNORA40.2-201ENST00000390847 SARNPP82979 210 aaKnown RBP-1.45□□□□□ -2.64
SNORA40.2-201ENST00000390847 TRGV9Q99603 122 aa-1.45□□□□□ -2.64
SNORA40.2-201ENST00000390847 TARBP1Q13395 1621 aaKnown RBP-1.45□□□□□ -2.64
SNORA40.2-201ENST00000390847 LELP1Q5T871 98 aa-1.46□□□□□ -2.64
SNORA40.2-201ENST00000390847 CLIP1P30622 1438 aa-1.47□□□□□ -2.64
SNORA40.2-201ENST00000390847 H0YGG7 62 aa-1.47□□□□□ -2.64
SNORA40.2-201ENST00000390847 STARD9Q9P2P6 4700 aa-1.47□□□□□ -2.64
SNORA40.2-201ENST00000390847 REV3LO60673 3130 aa-1.48□□□□□ -2.65
SNORA40.2-201ENST00000390847 H7BZZ5 65 aa-1.48□□□□□ -2.65
SNORA40.2-201ENST00000390847 MPC2O95563 127 aa-1.48□□□□□ -2.65
SNORA40.2-201ENST00000390847 WFDC13Q8IUB5 93 aa-1.48□□□□□ -2.65
SNORA40.2-201ENST00000390847 HIGD1BQ9P298 99 aa-1.48□□□□□ -2.65
SNORA40.2-201ENST00000390847 AKAP13Q12802 2813 aa-1.49□□□□□ -2.65
SNORA40.2-201ENST00000390847 PMCHL2Q9BQD1 86 aa-1.49□□□□□ -2.65
SNORA40.2-201ENST00000390847 AP4S1Q9Y587 144 aa-1.49□□□□□ -2.65
SNORA40.2-201ENST00000390847 FAM135AQ9P2D6 1515 aa-1.5□□□□□ -2.65
SNORA40.2-201ENST00000390847 NBASA2RRP1 2371 aa-1.5□□□□□ -2.65
SNORA40.2-201ENST00000390847 TMEM218A2RU14 115 aa-1.5□□□□□ -2.65
SNORA40.2-201ENST00000390847 NCOA3Q9Y6Q9 1424 aa-1.5□□□□□ -2.65
SNORA40.2-201ENST00000390847 EPPK1P58107 5090 aaKnown RBP-1.51□□□□□ -2.65
SNORA40.2-201ENST00000390847 KNL1Q8NG31 2342 aa-1.51□□□□□ -2.65
SNORA40.2-201ENST00000390847 SONP18583 2426 aaKnown RBP-1.51□□□□□ -2.65
SNORA40.2-201ENST00000390847 PSENENQ9NZ42 101 aa-1.51□□□□□ -2.65
SNORA40.2-201ENST00000390847 EPG5Q9HCE0 2579 aa-1.51□□□□□ -2.65
SNORA40.2-201ENST00000390847 PKD1P98161 4303 aa-1.51□□□□□ -2.65
SNORA40.2-201ENST00000390847 CUX1P39880 1505 aa-1.51□□□□□ -2.65
SNORA40.2-201ENST00000390847 SHPRHQ149N8 1683 aa-1.51□□□□□ -2.65
SNORA40.2-201ENST00000390847 KIAA1551Q9HCM1 1747 aa-1.52□□□□□ -2.65
SNORA40.2-201ENST00000390847 PRRC2CQ9Y520 2896 aaKnown RBP-1.52□□□□□ -2.65
SNORA40.2-201ENST00000390847 ANKRD36A6QL64 1941 aa-1.52□□□□□ -2.65
SNORA40.2-201ENST00000390847 ABCA3Q99758 1704 aa-1.52□□□□□ -2.65
SNORA40.2-201ENST00000390847 TRANK1O15050 2925 aa-1.53□□□□□ -2.65
SNORA40.2-201ENST00000390847 PRDM15P57071 1507 aaPredicted RBP-1.53□□□□□ -2.65
SNORA40.2-201ENST00000390847 SPG11Q96JI7 2443 aa-1.53□□□□□ -2.65
SNORA40.2-201ENST00000390847 HECTD1Q9ULT8 2610 aa-1.53□□□□□ -2.66
SNORA40.2-201ENST00000390847 ABCC2Q92887 1545 aa-1.54□□□□□ -2.66
SNORA40.2-201ENST00000390847 RAPGEF2Q9Y4G8 1499 aa-1.54□□□□□ -2.66
SNORA40.2-201ENST00000390847 ATOX1O00244 68 aa-1.54□□□□□ -2.66
SNORA40.2-201ENST00000390847 SERP2Q8N6R1 65 aa-1.54□□□□□ -2.66
SNORA40.2-201ENST00000390847 DNAH6Q9C0G6 4158 aa-1.54□□□□□ -2.66
SNORA40.2-201ENST00000390847 SAMD9Q5K651 1589 aa-1.55□□□□□ -2.66
SNORA40.2-201ENST00000390847 TACC2O95359 2948 aa-1.55□□□□□ -2.66
SNORA40.2-201ENST00000390847 MT-ATP8P03928 68 aa-1.55□□□□□ -2.66
SNORA40.2-201ENST00000390847 PTPN23Q9H3S7 1636 aa-1.55□□□□□ -2.66
SNORA40.2-201ENST00000390847 ADAMTS12P58397 1594 aa-1.55□□□□□ -2.66
SNORA40.2-201ENST00000390847 ANKRD36BQ8N2N9 1353 aa-1.56□□□□□ -2.66
SNORA40.2-201ENST00000390847 MON2Q7Z3U7 1717 aa-1.56□□□□□ -2.66
SNORA40.2-201ENST00000390847 USP9YO00507 2555 aaPredicted RBP-1.56□□□□□ -2.66
SNORA40.2-201ENST00000390847 D6R8Y8 96 aa-1.56□□□□□ -2.66
SNORA40.2-201ENST00000390847 IGLC2P0DOY2 106 aa-1.56□□□□□ -2.66
SNORA40.2-201ENST00000390847 IGLC3P0DOY3 106 aa-1.56□□□□□ -2.66
SNORA40.2-201ENST00000390847 MUSTN1Q8IVN3 82 aa-1.56□□□□□ -2.66
SNORA40.2-201ENST00000390847 ZFYVE16Q7Z3T8 1539 aa-1.56□□□□□ -2.66
SNORA40.2-201ENST00000390847 LEPROTL1O95214 131 aa-1.57□□□□□ -2.66
SNORA40.2-201ENST00000390847 HMGN3Q15651 99 aa-1.57□□□□□ -2.66
SNORA40.2-201ENST00000390847 ETDBQ3ZM63 59 aa-1.57□□□□□ -2.66
SNORA40.2-201ENST00000390847 COL14A1Q05707 1796 aaKnown RBP-1.57□□□□□ -2.66
SNORA40.2-201ENST00000390847 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.57□□□□□ -2.66
SNORA40.2-201ENST00000390847 C5P01031 1676 aa-1.58□□□□□ -2.66
SNORA40.2-201ENST00000390847 S100A10P60903 97 aa-1.58□□□□□ -2.66
SNORA40.2-201ENST00000390847 COL5A1-AS1Q5SY13 56 aa-1.58□□□□□ -2.66
SNORA40.2-201ENST00000390847 ALKAL2Q6UX46 152 aa-1.58□□□□□ -2.66
SNORA40.2-201ENST00000390847 ZNF720Q7Z2F6 126 aa-1.58□□□□□ -2.66
SNORA40.2-201ENST00000390847 NRXN1Q9ULB1 1477 aa-1.58□□□□□ -2.66
SNORA40.2-201ENST00000390847 NBPF19A0A087WUL8 3843 aa-1.59□□□□□ -2.66
SNORA40.2-201ENST00000390847 HTTP42858 3142 aa-1.6□□□□□ -2.67
SNORA40.2-201ENST00000390847 NMSQ5H8A3 153 aa-1.61□□□□□ -2.67
SNORA40.2-201ENST00000390847 TNRC18O15417 2968 aaPredicted RBP-1.62□□□□□ -2.67
SNORA40.2-201ENST00000390847 UQCRHLA0A096LP55 91 aa-1.62□□□□□ -2.67
SNORA40.2-201ENST00000390847 F8WEM9 126 aa-1.62□□□□□ -2.67
SNORA40.2-201ENST00000390847 CICQ96RK0 1608 aaPredicted RBP-1.62□□□□□ -2.67
SNORA40.2-201ENST00000390847 BIRC6Q9NR09 4857 aa-1.63□□□□□ -2.67
SNORA40.2-201ENST00000390847 S100PP25815 95 aa-1.63□□□□□ -2.67
SNORA40.2-201ENST00000390847 FAUP35544 74 aaKnown RBP-1.63□□□□□ -2.67
SNORA40.2-201ENST00000390847 BCORQ6W2J9 1755 aa-1.63□□□□□ -2.67
SNORA40.2-201ENST00000390847 LINC00032P0C843 101 aa-1.64□□□□□ -2.67
SNORA40.2-201ENST00000390847 SPRR2FQ96RM1 72 aa-1.64□□□□□ -2.67
SNORA40.2-201ENST00000390847 TROQ12816 1431 aaPredicted RBP-1.65□□□□□ -2.67
SNORA40.2-201ENST00000390847 ITPR3Q14573 2671 aa-1.65□□□□□ -2.67
SNORA40.2-201ENST00000390847 PDE4DIPQ5VU43 2346 aa-1.65□□□□□ -2.67
SNORA40.2-201ENST00000390847 RYR2Q92736 4967 aa-1.65□□□□□ -2.67
SNORA40.2-201ENST00000390847 KIF20BQ96Q89 1820 aa-1.66□□□□□ -2.67
SNORA40.2-201ENST00000390847 FAT3Q8TDW7 4589 aa-1.66□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms