RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 PLIN4Q96Q06 1357 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 MYH7P12883 1935 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 TET3O43151 1660 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 WIZO95785 1651 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 TNFSF15O95150 251 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 LEPROTL1O95214 131 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 PTMAP06454 111 aaKnown RBP-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 TRAPPC2P0DI81 140 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 TRAPPC2BP0DI82 140 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 SERPINB1P30740 379 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 MAGOHP61326 146 aaKnown RBP-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 MRPS10P82664 201 aaKnown RBP-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 TCTE3Q8IZS6 198 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 DYDC1Q8WWB3 177 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 ARL11Q969Q4 196 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 C9orf16Q9BUW7 83 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 CCDC32Q9BV29 185 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 VAMP8Q9BV40 100 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 BANF2Q9H503 90 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 MED31Q9Y3C7 131 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 CCDC144AA2RUR9 1427 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 UNC80Q8N2C7 3258 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 ATP10BO94823 1461 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 ZNF518AQ6AHZ1 1483 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 TEX14Q8IWB6 1497 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 DEPDC5O75140 1603 aa-1.18□□□□□ -2.6
TRAJ28-201ENST00000390509 MAP3K5Q99683 1374 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 KIF1BO60333 1816 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 C20orf202A1L168 122 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 NDUFC1O43677 76 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 MT-ND4LP03901 98 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 PAEPP09466 180 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 COX6CP09669 75 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 IGLC2P0DOY2 106 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 IGLC3P0DOY3 106 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 NCS1P62166 190 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 HIST1H1AQ02539 215 aaPredicted RBP-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 PRDM2Q13029 1718 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 SPA17Q15506 151 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 RGS21Q2M5E4 152 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 TMEM244Q5VVB8 128 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 PTRHD1Q6GMV3 140 aaKnown RBP-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 FAM24BQ8N5W8 94 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 MNS1Q8NEH6 495 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 OR9Q1Q8NGQ5 310 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 THEM6Q8WUY1 208 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 LLPHQ9BRT6 129 aaKnown RBP-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 TOGARAM1Q9Y4F4 1720 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 LRRC9Q6ZRR7 1453 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 MLH3Q9UHC1 1453 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 PARP14Q460N5 1801 aa-1.19□□□□□ -2.6
TRAJ28-201ENST00000390509 C4AP0C0L4 1744 aa-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 C4BP0C0L5 1744 aa-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 EEA1Q15075 1411 aa-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 ATG12O94817 140 aa-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 CCDC172P0C7W6 258 aa-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 RPS27P42677 84 aaKnown RBP-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 POLR2HP52434 150 aaKnown RBP-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 REEP5Q00765 189 aa-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 HSD52Q0P140 79 aa-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 KRTAP19-2Q3LHN2 52 aa-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 C12orf73Q69YU5 71 aa-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 RPS27LQ71UM5 84 aaKnown RBP-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 FAM9CQ8IZT9 166 aa-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 OR13C6PQ8NH95 151 aa-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 CCDC115Q96NT0 180 aa-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 C12orf57Q99622 126 aa-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 NKIRAS1Q9NYS0 192 aa-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 SS18L2Q9UHA2 77 aa-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 TMEM131LA2VDJ0 1609 aa-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 USP32Q8NFA0 1604 aa-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 EHBP1L1Q8N3D4 1523 aa-1.2□□□□□ -2.6
TRAJ28-201ENST00000390509 ROCK1Q13464 1354 aa-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 SAMD9Q5K651 1589 aa-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 N4BP2Q86UW6 1770 aaPredicted RBP-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 PIK3C2BO00750 1634 aa-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 PSME4Q14997 1843 aa-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 SMIM23A6NLE4 172 aa-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 M0R129 80 aa-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 PFDN1O60925 122 aa-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 RPP14O95059 124 aaKnown RBP-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 Q56UQ5 140 aa-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 CCDC42Q96M95 316 aa-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 GAFA1Q96PS6 74 aa-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 SPANXDQ9BXN6 97 aa-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 MANBALQ9NQG1 85 aa-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 PREX1Q8TCU6 1659 aa-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 KIAA1551Q9HCM1 1747 aa-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 MUC22E2RYF6 1773 aaPredicted RBP-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 RGPD8O14715 1765 aaPredicted RBP-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 RGPD5Q99666 1765 aa-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 SCN11AQ9UI33 1791 aa-1.21□□□□□ -2.6
TRAJ28-201ENST00000390509 MYOM1P52179 1685 aa-1.22□□□□□ -2.6
TRAJ28-201ENST00000390509 MYH6P13533 1939 aa-1.22□□□□□ -2.6
TRAJ28-201ENST00000390509 MED14O60244 1454 aa-1.22□□□□□ -2.6
TRAJ28-201ENST00000390509 ERVK-7P63135 1459 aa-1.22□□□□□ -2.6
TRAJ28-201ENST00000390509 NCOA2Q15596 1464 aa-1.22□□□□□ -2.6
TRAJ28-201ENST00000390509 F6UZH7 168 aa-1.22□□□□□ -2.6
TRAJ28-201ENST00000390509 TSTD3H0UI37 97 aa-1.22□□□□□ -2.6
TRAJ28-201ENST00000390509 DBIP07108 87 aaKnown RBP-1.22□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms