RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 NDUFA2O43678 99 aa-1.55□□□□□ -2.66
RNU6-541P-201ENST00000384709 LRRK2Q5S007 2527 aa-1.55□□□□□ -2.66
RNU6-541P-201ENST00000384709 DNAH1Q9P2D7 4330 aa-1.55□□□□□ -2.66
RNU6-541P-201ENST00000384709 PKD1L3Q7Z443 1732 aa-1.55□□□□□ -2.66
RNU6-541P-201ENST00000384709 NRKQ7Z2Y5 1582 aa-1.55□□□□□ -2.66
RNU6-541P-201ENST00000384709 MYOM2P54296 1465 aa-1.56□□□□□ -2.66
RNU6-541P-201ENST00000384709 TROQ12816 1431 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-541P-201ENST00000384709 C4AP0C0L4 1744 aa-1.56□□□□□ -2.66
RNU6-541P-201ENST00000384709 C4BP0C0L5 1744 aa-1.56□□□□□ -2.66
RNU6-541P-201ENST00000384709 A0A1B0GU69 56 aa-1.56□□□□□ -2.66
RNU6-541P-201ENST00000384709 C9orf153Q5TBE3 101 aa-1.56□□□□□ -2.66
RNU6-541P-201ENST00000384709 MAPKBP1O60336 1514 aa-1.56□□□□□ -2.66
RNU6-541P-201ENST00000384709 RGPD3A6NKT7 1758 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-541P-201ENST00000384709 RGPD4Q7Z3J3 1758 aa-1.57□□□□□ -2.66
RNU6-541P-201ENST00000384709 I3L3M4 83 aa-1.57□□□□□ -2.66
RNU6-541P-201ENST00000384709 GNG11P61952 73 aa-1.57□□□□□ -2.66
RNU6-541P-201ENST00000384709 PP6455Q8WZ26 134 aa-1.57□□□□□ -2.66
RNU6-541P-201ENST00000384709 PRO1854Q9UHT4 67 aa-1.57□□□□□ -2.66
RNU6-541P-201ENST00000384709 CRYBG1Q9Y4K1 1723 aa-1.57□□□□□ -2.66
RNU6-541P-201ENST00000384709 MTORP42345 2549 aa-1.58□□□□□ -2.66
RNU6-541P-201ENST00000384709 RYR1P21817 5038 aa-1.58□□□□□ -2.66
RNU6-541P-201ENST00000384709 UBR3Q6ZT12 1888 aa-1.58□□□□□ -2.66
RNU6-541P-201ENST00000384709 K7EP13 123 aa-1.58□□□□□ -2.66
RNU6-541P-201ENST00000384709 MRPL34Q9BQ48 92 aaKnown RBP-1.58□□□□□ -2.66
RNU6-541P-201ENST00000384709 TIAM2Q8IVF5 1701 aa-1.58□□□□□ -2.66
RNU6-541P-201ENST00000384709 RYR3Q15413 4870 aa-1.58□□□□□ -2.66
RNU6-541P-201ENST00000384709 PLECQ15149 4684 aaKnown RBP-1.58□□□□□ -2.66
RNU6-541P-201ENST00000384709 CCDC168Q8NDH2 2452 aa-1.59□□□□□ -2.66
RNU6-541P-201ENST00000384709 CUX1P39880 1505 aa-1.59□□□□□ -2.66
RNU6-541P-201ENST00000384709 TRAPPC2P0DI81 140 aa-1.59□□□□□ -2.66
RNU6-541P-201ENST00000384709 TRAPPC2BP0DI82 140 aa-1.59□□□□□ -2.66
RNU6-541P-201ENST00000384709 MANBALQ9NQG1 85 aa-1.59□□□□□ -2.66
RNU6-541P-201ENST00000384709 GCN1Q92616 2671 aaKnown RBP-1.59□□□□□ -2.66
RNU6-541P-201ENST00000384709 LAMA2P24043 3122 aaKnown RBP-1.6□□□□□ -2.66
RNU6-541P-201ENST00000384709 NBEAQ8NFP9 2946 aa-1.6□□□□□ -2.66
RNU6-541P-201ENST00000384709 CCL22O00626 93 aa-1.6□□□□□ -2.67
RNU6-541P-201ENST00000384709 LELP1Q5T871 98 aa-1.6□□□□□ -2.67
RNU6-541P-201ENST00000384709 C6orf201Q7Z4U5 140 aa-1.6□□□□□ -2.67
RNU6-541P-201ENST00000384709 C1orf54Q8WWF1 131 aa-1.6□□□□□ -2.67
RNU6-541P-201ENST00000384709 ARHGAP5Q13017 1502 aa-1.61□□□□□ -2.67
RNU6-541P-201ENST00000384709 PREX1Q8TCU6 1659 aa-1.61□□□□□ -2.67
RNU6-541P-201ENST00000384709 SACSQ9NZJ4 4579 aa-1.61□□□□□ -2.67
RNU6-541P-201ENST00000384709 RGPD8O14715 1765 aaPredicted RBP-1.61□□□□□ -2.67
RNU6-541P-201ENST00000384709 RGPD5Q99666 1765 aa-1.61□□□□□ -2.67
RNU6-541P-201ENST00000384709 A0A087WVE0 104 aa-1.61□□□□□ -2.67
RNU6-541P-201ENST00000384709 AKAIN1P0CW23 69 aa-1.61□□□□□ -2.67
RNU6-541P-201ENST00000384709 C12orf57Q99622 126 aa-1.61□□□□□ -2.67
RNU6-541P-201ENST00000384709 NIPBLQ6KC79 2804 aaeCLIP-1.62□□□□□ -2.67
RNU6-541P-201ENST00000384709 NEBP20929 6669 aa-1.62□□□□□ -2.67
RNU6-541P-201ENST00000384709 TEX15Q9BXT5 2789 aa-1.62□□□□□ -2.67
RNU6-541P-201ENST00000384709 NAP1L6A6NFF2 107 aa-1.62□□□□□ -2.67
RNU6-541P-201ENST00000384709 H0YGG7 62 aa-1.62□□□□□ -2.67
RNU6-541P-201ENST00000384709 SFTA2Q6UW10 78 aa-1.62□□□□□ -2.67
RNU6-541P-201ENST00000384709 MGAM2Q2M2H8 2515 aa-1.62□□□□□ -2.67
RNU6-541P-201ENST00000384709 NBEAL2Q6ZNJ1 2754 aa-1.62□□□□□ -2.67
RNU6-541P-201ENST00000384709 FAM24AA6NFZ4 105 aa-1.63□□□□□ -2.67
RNU6-541P-201ENST00000384709 CCDC58Q4VC31 144 aa-1.63□□□□□ -2.67
RNU6-541P-201ENST00000384709 RELNP78509 3460 aa-1.64□□□□□ -2.67
RNU6-541P-201ENST00000384709 CDKN2A-AS1Q9UH64 79 aa-1.64□□□□□ -2.67
RNU6-541P-201ENST00000384709 IER3IP1Q9Y5U9 82 aa-1.64□□□□□ -2.67
RNU6-541P-201ENST00000384709 LAMA3Q16787 3333 aa-1.65□□□□□ -2.67
RNU6-541P-201ENST00000384709 CLIP1P30622 1438 aa-1.65□□□□□ -2.67
RNU6-541P-201ENST00000384709 H3BQ15 152 aa-1.65□□□□□ -2.67
RNU6-541P-201ENST00000384709 WFDC13Q8IUB5 93 aa-1.65□□□□□ -2.67
RNU6-541P-201ENST00000384709 HIGD1BQ9P298 99 aa-1.65□□□□□ -2.67
RNU6-541P-201ENST00000384709 EIF4G3O43432 1585 aaKnown RBP-1.65□□□□□ -2.67
RNU6-541P-201ENST00000384709 SAMD9Q5K651 1589 aa-1.65□□□□□ -2.67
RNU6-541P-201ENST00000384709 A0A0G2JND7 137 aa-1.66□□□□□ -2.68
RNU6-541P-201ENST00000384709 H0Y9P7 68 aa-1.66□□□□□ -2.68
RNU6-541P-201ENST00000384709 H3BQF6 201 aa-1.66□□□□□ -2.68
RNU6-541P-201ENST00000384709 SNCAP37840 140 aa-1.66□□□□□ -2.68
RNU6-541P-201ENST00000384709 DNHD1Q96M86 4753 aa-1.66□□□□□ -2.68
RNU6-541P-201ENST00000384709 C7orf77A4D0Y5 90 aa-1.67□□□□□ -2.68
RNU6-541P-201ENST00000384709 CMYA5Q8N3K9 4069 aa-1.67□□□□□ -2.68
RNU6-541P-201ENST00000384709 TRAV30A0A087WSZ9 112 aa-1.68□□□□□ -2.68
RNU6-541P-201ENST00000384709 CGREF1Q99674 301 aa-1.68□□□□□ -2.68
RNU6-541P-201ENST00000384709 DSPP15924 2871 aaKnown RBP-1.68□□□□□ -2.68
RNU6-541P-201ENST00000384709 DNAH8Q96JB1 4490 aa-1.69□□□□□ -2.68
RNU6-541P-201ENST00000384709 KIAA1109Q2LD37 5005 aa-1.69□□□□□ -2.68
RNU6-541P-201ENST00000384709 ARMS2P0C7Q2 107 aa-1.69□□□□□ -2.68
RNU6-541P-201ENST00000384709 S100A12P80511 92 aa-1.69□□□□□ -2.68
RNU6-541P-201ENST00000384709 HSD52Q0P140 79 aa-1.69□□□□□ -2.68
RNU6-541P-201ENST00000384709 HEPN1Q6WQI6 88 aa-1.69□□□□□ -2.68
RNU6-541P-201ENST00000384709 SUPT6HQ7KZ85 1726 aaKnown RBP-1.69□□□□□ -2.68
RNU6-541P-201ENST00000384709 SCN11AQ9UI33 1791 aa-1.7□□□□□ -2.68
RNU6-541P-201ENST00000384709 ROCK2O75116 1388 aaKnown RBP-1.7□□□□□ -2.68
RNU6-541P-201ENST00000384709 CRYM-AS1A6NIL9 109 aa-1.7□□□□□ -2.68
RNU6-541P-201ENST00000384709 CEP290O15078 2479 aa-1.7□□□□□ -2.68
RNU6-541P-201ENST00000384709 DEFB107AQ8IZN7 70 aa-1.7□□□□□ -2.68
RNU6-541P-201ENST00000384709 ALKQ9UM73 1620 aa-1.7□□□□□ -2.68
RNU6-541P-201ENST00000384709 ACACBO00763 2458 aa-1.71□□□□□ -2.68
RNU6-541P-201ENST00000384709 SPTY2D1-AS1A0A0U1RR47 76 aa-1.71□□□□□ -2.68
RNU6-541P-201ENST00000384709 C9orf92A6NGG3 77 aa-1.71□□□□□ -2.68
RNU6-541P-201ENST00000384709 TMEM262E9PQX1 116 aa-1.71□□□□□ -2.68
RNU6-541P-201ENST00000384709 H3BNG1 76 aa-1.71□□□□□ -2.68
RNU6-541P-201ENST00000384709 TSC22D3Q99576 134 aa-1.71□□□□□ -2.68
RNU6-541P-201ENST00000384709 PZPP20742 1482 aa-1.71□□□□□ -2.68
RNU6-541P-201ENST00000384709 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.71□□□□□ -2.68
RNU6-541P-201ENST00000384709 RIF1Q5UIP0 2472 aaKnown RBP-1.72□□□□□ -2.68
RNU6-541P-201ENST00000384709 WDR87Q6ZQQ6 2873 aa-1.72□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms