RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 LITAFQ99732 161 aa9.69□□□□□ -0.86
PDGFB-202ENST00000381551 TIMM17BO60830 172 aa9.68□□□□□ -0.86
PDGFB-202ENST00000381551 LOC107984156A0A0G2JMH3 177 aa9.67□□□□□ -0.86
PDGFB-202ENST00000381551 PHF5AQ7RTV0 110 aaKnown RBP9.67□□□□□ -0.86
PDGFB-202ENST00000381551 ARL17AQ8IVW1 177 aa9.67□□□□□ -0.86
PDGFB-202ENST00000381551 LINC00528Q8N1L1 170 aa9.67□□□□□ -0.86
PDGFB-202ENST00000381551 Q8N1X5 172 aa9.67□□□□□ -0.86
PDGFB-202ENST00000381551 VAMP8Q9BV40 100 aa9.67□□□□□ -0.86
PDGFB-202ENST00000381551 PAM16Q9Y3D7 125 aa9.67□□□□□ -0.86
PDGFB-202ENST00000381551 C22orf24Q9Y442 160 aa9.67□□□□□ -0.86
PDGFB-202ENST00000381551 SPATA45Q537H7 98 aa9.66□□□□□ -0.86
PDGFB-202ENST00000381551 SCGB1D4Q6XE38 83 aa9.66□□□□□ -0.86
PDGFB-202ENST00000381551 IGLV5-37A0A075B6J1 123 aa9.65□□□□□ -0.86
PDGFB-202ENST00000381551 COX8AP10176 69 aa9.65□□□□□ -0.86
PDGFB-202ENST00000381551 RPL24P83731 157 aaKnown RBP9.65□□□□□ -0.86
PDGFB-202ENST00000381551 BOD1L2Q8IYS8 172 aa9.65□□□□□ -0.86
PDGFB-202ENST00000381551 Q8NDZ9 215 aa9.65□□□□□ -0.86
PDGFB-202ENST00000381551 VPS13BQ7Z7G8 4022 aa9.65□□□□□ -0.86
PDGFB-202ENST00000381551 FAM229AH3BQW9 127 aa9.64□□□□□ -0.87
PDGFB-202ENST00000381551 M0QXV9 152 aa9.64□□□□□ -0.87
PDGFB-202ENST00000381551 VPREB1P12018 145 aa9.64□□□□□ -0.87
PDGFB-202ENST00000381551 TP73-AS1Q9UF72 201 aa9.64□□□□□ -0.87
PDGFB-202ENST00000381551 EIF4EBP3O60516 100 aaPredicted RBP9.63□□□□□ -0.87
PDGFB-202ENST00000381551 C7orf33Q8WU49 177 aa9.63□□□□□ -0.87
PDGFB-202ENST00000381551 LOC105371267A0A1B0GV96 52 aa9.62□□□□□ -0.87
PDGFB-202ENST00000381551 TMEM238C9JI98 176 aa9.62□□□□□ -0.87
PDGFB-202ENST00000381551 DLEU1O43261 78 aa9.62□□□□□ -0.87
PDGFB-202ENST00000381551 LBHQ53QV2 105 aaPredicted RBP9.62□□□□□ -0.87
PDGFB-202ENST00000381551 SOSTDC1Q6X4U4 206 aa9.62□□□□□ -0.87
PDGFB-202ENST00000381551 MRPL55Q7Z7F7 128 aaKnown RBP9.62□□□□□ -0.87
PDGFB-202ENST00000381551 LINC00308Q8TCZ7 52 aa9.62□□□□□ -0.87
PDGFB-202ENST00000381551 C14orf144Q96I85 54 aa9.62□□□□□ -0.87
PDGFB-202ENST00000381551 NPC2P61916 151 aa9.61□□□□□ -0.87
PDGFB-202ENST00000381551 PRR3P79522 188 aaKnown RBP9.61□□□□□ -0.87
PDGFB-202ENST00000381551 Q5VSD8 79 aa9.61□□□□□ -0.87
PDGFB-202ENST00000381551 KRTAP11-1Q8IUC1 163 aa9.61□□□□□ -0.87
PDGFB-202ENST00000381551 NKAPP1Q8N9T2 125 aa9.61□□□□□ -0.87
PDGFB-202ENST00000381551 LINC00167Q96N53 147 aa9.61□□□□□ -0.87
PDGFB-202ENST00000381551 SPANXDQ9BXN6 97 aa9.61□□□□□ -0.87
PDGFB-202ENST00000381551 SPANXCQ9NY87 97 aa9.61□□□□□ -0.87
PDGFB-202ENST00000381551 KRTAP10-4P60372 401 aaPredicted RBP9.6□□□□□ -0.87
PDGFB-202ENST00000381551 MIEN1Q9BRT3 115 aa9.6□□□□□ -0.87
PDGFB-202ENST00000381551 RPL37AP61513 92 aaKnown RBP9.59□□□□□ -0.87
PDGFB-202ENST00000381551 Q6ZVH6 145 aa9.59□□□□□ -0.87
PDGFB-202ENST00000381551 ABCA13Q86UQ4 5058 aa9.58□□□□□ -0.88
PDGFB-202ENST00000381551 GAGE10A6NGK3 116 aa9.58□□□□□ -0.88
PDGFB-202ENST00000381551 NDUFC2O95298 119 aa9.58□□□□□ -0.88
PDGFB-202ENST00000381551 PLA2G1BP04054 148 aaKnown RBP9.58□□□□□ -0.88
PDGFB-202ENST00000381551 UBE2BP63146 152 aa9.58□□□□□ -0.88
PDGFB-202ENST00000381551 KRTAP4-5Q9BYR2 181 aa9.58□□□□□ -0.88
PDGFB-202ENST00000381551 PSORS1C2Q9UIG4 136 aa9.58□□□□□ -0.88
PDGFB-202ENST00000381551 RPL37AP8A6NKH3 93 aa9.57□□□□□ -0.88
PDGFB-202ENST00000381551 M0R378 163 aa9.57□□□□□ -0.88
PDGFB-202ENST00000381551 IFITM1P13164 125 aa9.57□□□□□ -0.88
PDGFB-202ENST00000381551 SLC25A34Q6PIV7 304 aa9.57□□□□□ -0.88
PDGFB-202ENST00000381551 SPANXB1Q9NS25 103 aaPredicted RBP9.57□□□□□ -0.88
PDGFB-202ENST00000381551 S100A12P80511 92 aa9.56□□□□□ -0.88
PDGFB-202ENST00000381551 MUSTN1Q8IVN3 82 aa9.56□□□□□ -0.88
PDGFB-202ENST00000381551 PPDPFQ9H3Y8 114 aa9.56□□□□□ -0.88
PDGFB-202ENST00000381551 SRRM2Q9UQ35 2752 aaKnown RBP9.56□□□□□ -0.88
PDGFB-202ENST00000381551 IGLV1-50A0A075B6I6 118 aa9.55□□□□□ -0.88
PDGFB-202ENST00000381551 SRSF9Q13242 221 aaKnown RBP eCLIP9.55□□□□□ -0.88
PDGFB-202ENST00000381551 TRBV10-2A0A0K0K1G8 114 aa9.54□□□□□ -0.88
PDGFB-202ENST00000381551 NCR3O14931 201 aa9.54□□□□□ -0.88
PDGFB-202ENST00000381551 SMIM6P0DI80 62 aa9.54□□□□□ -0.88
PDGFB-202ENST00000381551 COPS9Q8WXC6 57 aa9.54□□□□□ -0.88
PDGFB-202ENST00000381551 HIGD1BQ9P298 99 aa9.53□□□□□ -0.88
PDGFB-202ENST00000381551 IGKV2-28A0A075B6P5 120 aa9.52□□□□□ -0.89
PDGFB-202ENST00000381551 IGKV2D-28P01615 120 aa9.52□□□□□ -0.89
PDGFB-202ENST00000381551 C1orf137Q5JT78 98 aa9.52□□□□□ -0.89
PDGFB-202ENST00000381551 C2orf91Q6ZV80 131 aa9.52□□□□□ -0.89
PDGFB-202ENST00000381551 TRBV10-3A0A0K0K1G6 114 aa9.5□□□□□ -0.89
PDGFB-202ENST00000381551 LINC00518Q8N0U6 118 aa9.5□□□□□ -0.89
PDGFB-202ENST00000381551 HIST1H4GQ99525 98 aa9.5□□□□□ -0.89
PDGFB-202ENST00000381551 PKHD1L1Q86WI1 4243 aa9.49□□□□□ -0.89
PDGFB-202ENST00000381551 IGLV6-57P01721 117 aa9.48□□□□□ -0.89
PDGFB-202ENST00000381551 IGLV7-43P04211 117 aa9.48□□□□□ -0.89
PDGFB-202ENST00000381551 DDTP30046 118 aa9.48□□□□□ -0.89
PDGFB-202ENST00000381551 HNRNPA3P51991 378 aaKnown RBP9.48□□□□□ -0.89
PDGFB-202ENST00000381551 S100A7L2Q5SY68 101 aa9.48□□□□□ -0.89
PDGFB-202ENST00000381551 KCNQ1DNQ9H478 68 aa9.48□□□□□ -0.89
PDGFB-202ENST00000381551 UQCR10Q9UDW1 63 aa9.48□□□□□ -0.89
PDGFB-202ENST00000381551 BCE1O60756 84 aa9.47□□□□□ -0.89
PDGFB-202ENST00000381551 REG3GQ6UW15 175 aa9.47□□□□□ -0.89
PDGFB-202ENST00000381551 LINC00337Q8N6G1 96 aa9.47□□□□□ -0.89
PDGFB-202ENST00000381551 TMEM126AQ9H061 195 aa9.47□□□□□ -0.89
PDGFB-202ENST00000381551 A4D1N5 150 aa9.46□□□□□ -0.9
PDGFB-202ENST00000381551 PRYO14603 147 aa9.45□□□□□ -0.9
PDGFB-202ENST00000381551 INAFM2P0DMQ5 153 aa9.45□□□□□ -0.9
PDGFB-202ENST00000381551 TAL2Q16559 108 aa9.45□□□□□ -0.9
PDGFB-202ENST00000381551 PRO1933Q9H354 126 aa9.45□□□□□ -0.9
PDGFB-202ENST00000381551 SPRR1AP35321 89 aa9.44□□□□□ -0.9
PDGFB-202ENST00000381551 OR13C6PQ8NH95 151 aa9.44□□□□□ -0.9
PDGFB-202ENST00000381551 C12orf57Q99622 126 aa9.44□□□□□ -0.9
PDGFB-202ENST00000381551 SPINK6Q6UWN8 80 aa9.43□□□□□ -0.9
PDGFB-202ENST00000381551 ZNF861PO60384 105 aa9.42□□□□□ -0.9
PDGFB-202ENST00000381551 CEND1Q8N111 149 aa9.42□□□□□ -0.9
PDGFB-202ENST00000381551 TRAV23DV6A0A075B6W5 121 aa9.41□□□□□ -0.9
PDGFB-202ENST00000381551 TRAV13-2A0A0B4J235 113 aa9.41□□□□□ -0.9
PDGFB-202ENST00000381551 A6NDN8 102 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms