RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 Q6ZRU5 148 aa12.91□□□□□ -0.34
SMARCD1-201ENST00000381513 C1orf64Q8NEQ6 169 aa12.9□□□□□ -0.34
SMARCD1-201ENST00000381513 KIAA0087Q14695 138 aa12.9□□□□□ -0.34
SMARCD1-201ENST00000381513 COX7BP24311 80 aa12.89□□□□□ -0.35
SMARCD1-201ENST00000381513 UNQ6190/PRO20217Q6UXQ8 127 aa12.89□□□□□ -0.35
SMARCD1-201ENST00000381513 GYPEP15421 78 aa12.88□□□□□ -0.35
SMARCD1-201ENST00000381513 NCOR2Q9Y618 2525 aa12.88□□□□□ -0.35
SMARCD1-201ENST00000381513 C16orf74Q96GX8 76 aa12.88□□□□□ -0.35
SMARCD1-201ENST00000381513 CHCHD10Q8WYQ3 142 aaPredicted RBP12.88□□□□□ -0.35
SMARCD1-201ENST00000381513 ZFYVE26Q68DK2 2539 aa12.88□□□□□ -0.35
SMARCD1-201ENST00000381513 XAGE1AQ9HD64 81 aa12.87□□□□□ -0.35
SMARCD1-201ENST00000381513 CHD6Q8TD26 2715 aa12.87□□□□□ -0.35
SMARCD1-201ENST00000381513 H3BQ85 93 aa12.87□□□□□ -0.35
SMARCD1-201ENST00000381513 C10orf25Q5T742 122 aa12.87□□□□□ -0.35
SMARCD1-201ENST00000381513 CCL19Q99731 98 aa12.87□□□□□ -0.35
SMARCD1-201ENST00000381513 KLK12Q9UKR0 248 aa12.87□□□□□ -0.35
SMARCD1-201ENST00000381513 B4DSR2 109 aa12.86□□□□□ -0.35
SMARCD1-201ENST00000381513 ZNF702PQ9H963 129 aa12.86□□□□□ -0.35
SMARCD1-201ENST00000381513 IGHV4-28A0A0C4DH34 117 aa12.86□□□□□ -0.35
SMARCD1-201ENST00000381513 ANGP03950 147 aaKnown RBP12.86□□□□□ -0.35
SMARCD1-201ENST00000381513 SMIM29Q86T20 159 aa12.86□□□□□ -0.35
SMARCD1-201ENST00000381513 LINC01356Q8N9X3 169 aa12.85□□□□□ -0.35
SMARCD1-201ENST00000381513 MAPK1IP1LQ8NDC0 245 aa12.85□□□□□ -0.35
SMARCD1-201ENST00000381513 WFDC10AQ9H1F0 79 aa12.85□□□□□ -0.35
SMARCD1-201ENST00000381513 HIGD2BQ4VC39 106 aa12.85□□□□□ -0.35
SMARCD1-201ENST00000381513 TRAV22A0A0B4J277 110 aa12.84□□□□□ -0.35
SMARCD1-201ENST00000381513 IGLV6-57P01721 117 aa12.84□□□□□ -0.35
SMARCD1-201ENST00000381513 ZNF73O43830 326 aaPredicted RBP12.83□□□□□ -0.36
SMARCD1-201ENST00000381513 Q1T7F1 81 aa12.83□□□□□ -0.36
SMARCD1-201ENST00000381513 SPAG11BQ08648 103 aa12.82□□□□□ -0.36
SMARCD1-201ENST00000381513 CD164Q04900 197 aa12.82□□□□□ -0.36
SMARCD1-201ENST00000381513 A8MUN3 132 aa12.81□□□□□ -0.36
SMARCD1-201ENST00000381513 MRPL55Q7Z7F7 128 aaKnown RBP12.81□□□□□ -0.36
SMARCD1-201ENST00000381513 IGHV4-31P0DP07 118 aa12.8□□□□□ -0.36
SMARCD1-201ENST00000381513 ZANQ9Y493 2812 aa12.79□□□□□ -0.36
SMARCD1-201ENST00000381513 A0A1B0GUV1 79 aa12.79□□□□□ -0.36
SMARCD1-201ENST00000381513 A8MU10 97 aa12.79□□□□□ -0.36
SMARCD1-201ENST00000381513 CELSR2Q9HCU4 2923 aa12.78□□□□□ -0.36
SMARCD1-201ENST00000381513 REG3AQ06141 175 aa12.78□□□□□ -0.36
SMARCD1-201ENST00000381513 LINC00612Q8N6U2 182 aa12.78□□□□□ -0.36
SMARCD1-201ENST00000381513 CYSRT1A8MQ03 144 aa12.78□□□□□ -0.36
SMARCD1-201ENST00000381513 DEFB105AQ8NG35 78 aa12.78□□□□□ -0.36
SMARCD1-201ENST00000381513 NBEAL2Q6ZNJ1 2754 aa12.76□□□□□ -0.37
SMARCD1-201ENST00000381513 C4orf3Q8WVX3 66 aa12.76□□□□□ -0.37
SMARCD1-201ENST00000381513 POLQO75417 2590 aa12.76□□□□□ -0.37
SMARCD1-201ENST00000381513 CCL24O00175 119 aa12.76□□□□□ -0.37
SMARCD1-201ENST00000381513 GIG44P09565 113 aaPredicted RBP12.75□□□□□ -0.37
SMARCD1-201ENST00000381513 SPTSSBQ8NFR3 76 aa12.75□□□□□ -0.37
SMARCD1-201ENST00000381513 EPG5Q9HCE0 2579 aa12.75□□□□□ -0.37
SMARCD1-201ENST00000381513 ESM1Q9NQ30 184 aa12.74□□□□□ -0.37
SMARCD1-201ENST00000381513 NAV2Q8IVL1 2488 aa12.72□□□□□ -0.37
SMARCD1-201ENST00000381513 ELOF1P60002 83 aaKnown RBP12.71□□□□□ -0.37
SMARCD1-201ENST00000381513 FBN2P35556 2912 aa12.7□□□□□ -0.38
SMARCD1-201ENST00000381513 APCP25054 2843 aa12.7□□□□□ -0.38
SMARCD1-201ENST00000381513 CHKB-CPT1BH3BT56 60 aa12.69□□□□□ -0.38
SMARCD1-201ENST00000381513 SYCNQ0VAF6 134 aa12.69□□□□□ -0.38
SMARCD1-201ENST00000381513 MXRA5Q9NR99 2828 aa12.68□□□□□ -0.38
SMARCD1-201ENST00000381513 PSCAO43653 123 aa12.67□□□□□ -0.38
SMARCD1-201ENST00000381513 NIPBLQ6KC79 2804 aaeCLIP12.67□□□□□ -0.38
SMARCD1-201ENST00000381513 Q6YL49 198 aa12.66□□□□□ -0.38
SMARCD1-201ENST00000381513 ETDCA0A1B0GVM5 59 aa12.66□□□□□ -0.38
SMARCD1-201ENST00000381513 UBE2BP63146 152 aa12.66□□□□□ -0.38
SMARCD1-201ENST00000381513 LRRK2Q5S007 2527 aa12.65□□□□□ -0.38
SMARCD1-201ENST00000381513 PIEZO1Q92508 2521 aa12.65□□□□□ -0.38
SMARCD1-201ENST00000381513 SETXQ7Z333 2677 aaKnown RBP12.65□□□□□ -0.38
SMARCD1-201ENST00000381513 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.65□□□□□ -0.38
SMARCD1-201ENST00000381513 PRO0255Q9UI72 69 aa12.65□□□□□ -0.38
SMARCD1-201ENST00000381513 A0A0J9YWU9 116 aa12.63□□□□□ -0.39
SMARCD1-201ENST00000381513 IGHV4-30-4P0DP06 118 aa12.63□□□□□ -0.39
SMARCD1-201ENST00000381513 ST20-AS1Q8NBB2 130 aa12.63□□□□□ -0.39
SMARCD1-201ENST00000381513 GCN1Q92616 2671 aaKnown RBP12.63□□□□□ -0.39
SMARCD1-201ENST00000381513 RBM12B-AS1Q9P1G2 102 aa12.62□□□□□ -0.39
SMARCD1-201ENST00000381513 C6orf48Q9UBA6 75 aa12.62□□□□□ -0.39
SMARCD1-201ENST00000381513 CSNK1G2-AS1Q8NCQ2 148 aa12.6□□□□□ -0.39
SMARCD1-201ENST00000381513 CENPEQ02224 2701 aa12.6□□□□□ -0.39
SMARCD1-201ENST00000381513 KPRPQ5T749 579 aaPredicted RBP12.6□□□□□ -0.39
SMARCD1-201ENST00000381513 Q5VV11 94 aa12.6□□□□□ -0.39
SMARCD1-201ENST00000381513 NBPF19A0A087WUL8 3843 aa12.59□□□□□ -0.39
SMARCD1-201ENST00000381513 KTN1-AS1Q86SY8 53 aa12.59□□□□□ -0.39
SMARCD1-201ENST00000381513 LINC00528Q8N1L1 170 aa12.59□□□□□ -0.39
SMARCD1-201ENST00000381513 UBE2AP49459 152 aa12.58□□□□□ -0.39
SMARCD1-201ENST00000381513 PRR15LQ9BU68 103 aa12.58□□□□□ -0.39
SMARCD1-201ENST00000381513 PKD1L2Q7Z442 2459 aa12.58□□□□□ -0.4
SMARCD1-201ENST00000381513 ZCCHC13Q8WW36 166 aaKnown RBP12.57□□□□□ -0.4
SMARCD1-201ENST00000381513 DEFB4AO15263 64 aa12.57□□□□□ -0.4
SMARCD1-201ENST00000381513 DEFB116Q30KQ4 102 aa12.57□□□□□ -0.4
SMARCD1-201ENST00000381513 ACACBO00763 2458 aa12.57□□□□□ -0.4
SMARCD1-201ENST00000381513 LYRM9A8MSI8 78 aa12.56□□□□□ -0.4
SMARCD1-201ENST00000381513 K7EQZ3 153 aa12.56□□□□□ -0.4
SMARCD1-201ENST00000381513 M0R378 163 aa12.55□□□□□ -0.4
SMARCD1-201ENST00000381513 CYP4F30PQ9H0H9 118 aa12.55□□□□□ -0.4
SMARCD1-201ENST00000381513 CAMK2N2Q96S95 79 aa12.55□□□□□ -0.4
SMARCD1-201ENST00000381513 C16orf90A8MZG2 172 aa12.54□□□□□ -0.4
SMARCD1-201ENST00000381513 LINC00588Q9Y4M8 146 aa12.54□□□□□ -0.4
SMARCD1-201ENST00000381513 LCE6AA0A183 80 aa12.54□□□□□ -0.4
SMARCD1-201ENST00000381513 HCG22E2RYF7 251 aa12.54□□□□□ -0.4
SMARCD1-201ENST00000381513 VPREB1P12018 145 aa12.54□□□□□ -0.4
SMARCD1-201ENST00000381513 CMC4P56277 68 aaPredicted RBP12.54□□□□□ -0.4
SMARCD1-201ENST00000381513 B9D2Q9BPU9 175 aa12.54□□□□□ -0.4
SMARCD1-201ENST00000381513 ANKRD17O75179 2603 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms