RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 TMEM126AQ9H061 195 aa11.42□□□□□ -0.58
RPAIN-203ENST00000381209 PPDPFLQ8WWR9 84 aa11.41□□□□□ -0.58
RPAIN-203ENST00000381209 DNAH9Q9NYC9 4486 aa11.41□□□□□ -0.58
RPAIN-203ENST00000381209 PRR3P79522 188 aaKnown RBP11.4□□□□□ -0.58
RPAIN-203ENST00000381209 RNF151Q2KHN1 245 aa11.4□□□□□ -0.58
RPAIN-203ENST00000381209 SYCNQ0VAF6 134 aa11.4□□□□□ -0.59
RPAIN-203ENST00000381209 Q8NDZ9 215 aa11.4□□□□□ -0.59
RPAIN-203ENST00000381209 NDUFC2-KCTD14E9PQ53 114 aa11.39□□□□□ -0.59
RPAIN-203ENST00000381209 NUPR2A6NF83 97 aa11.38□□□□□ -0.59
RPAIN-203ENST00000381209 FAM218AQ96MZ4 157 aa11.38□□□□□ -0.59
RPAIN-203ENST00000381209 NCR3O14931 201 aa11.36□□□□□ -0.59
RPAIN-203ENST00000381209 UBE2DNLQ8IWF7 75 aa11.36□□□□□ -0.59
RPAIN-203ENST00000381209 VPS25Q9BRG1 176 aa11.36□□□□□ -0.59
RPAIN-203ENST00000381209 USP17L23D6RBM5 183 aa11.35□□□□□ -0.59
RPAIN-203ENST00000381209 S100A7L2Q5SY68 101 aa11.35□□□□□ -0.59
RPAIN-203ENST00000381209 XAGE1AQ9HD64 81 aa11.35□□□□□ -0.59
RPAIN-203ENST00000381209 IGLV6-57P01721 117 aa11.34□□□□□ -0.59
RPAIN-203ENST00000381209 KRTAP21-3Q3LHN1 58 aa11.34□□□□□ -0.59
RPAIN-203ENST00000381209 A0A1B0GX51 115 aa11.33□□□□□ -0.6
RPAIN-203ENST00000381209 TLX1NBP0CAT3 122 aa11.33□□□□□ -0.6
RPAIN-203ENST00000381209 CASC10Q5T4H9 136 aa11.33□□□□□ -0.6
RPAIN-203ENST00000381209 A0A087WYN8 130 aa11.31□□□□□ -0.6
RPAIN-203ENST00000381209 VPREB1P12018 145 aa11.31□□□□□ -0.6
RPAIN-203ENST00000381209 RPL18AQ02543 176 aaKnown RBP11.31□□□□□ -0.6
RPAIN-203ENST00000381209 CBY1Q9Y3M2 126 aa11.31□□□□□ -0.6
RPAIN-203ENST00000381209 DNAL4O96015 105 aa11.3□□□□□ -0.6
RPAIN-203ENST00000381209 BAALC-AS2P0C853 105 aa11.3□□□□□ -0.6
RPAIN-203ENST00000381209 Q6ZRP5 223 aa11.3□□□□□ -0.6
RPAIN-203ENST00000381209 KRTAP1-5Q9BYS1 174 aa11.3□□□□□ -0.6
RPAIN-203ENST00000381209 DNHD1Q96M86 4753 aa11.29□□□□□ -0.6
RPAIN-203ENST00000381209 SLPIP03973 132 aa11.29□□□□□ -0.6
RPAIN-203ENST00000381209 GAGE2EQ4V326 116 aa11.29□□□□□ -0.6
RPAIN-203ENST00000381209 GAGE2DQ9UEU5 116 aa11.29□□□□□ -0.6
RPAIN-203ENST00000381209 TEX49A0A1B0GTD5 131 aa11.28□□□□□ -0.6
RPAIN-203ENST00000381209 M0R378 163 aa11.28□□□□□ -0.6
RPAIN-203ENST00000381209 LECT2O14960 151 aa11.28□□□□□ -0.6
RPAIN-203ENST00000381209 C6orf99Q4VX62 202 aa11.28□□□□□ -0.6
RPAIN-203ENST00000381209 STAB2Q8WWQ8 2551 aa11.26□□□□□ -0.61
RPAIN-203ENST00000381209 TRBV10-3A0A0K0K1G6 114 aa11.26□□□□□ -0.61
RPAIN-203ENST00000381209 LINC00167Q96N53 147 aa11.26□□□□□ -0.61
RPAIN-203ENST00000381209 DYNC2H1Q8NCM8 4307 aaKnown RBP11.26□□□□□ -0.61
RPAIN-203ENST00000381209 TTC32Q5I0X7 151 aa11.25□□□□□ -0.61
RPAIN-203ENST00000381209 C9orf129Q5T035 196 aaKnown RBP11.25□□□□□ -0.61
RPAIN-203ENST00000381209 DNAH1Q9P2D7 4330 aa11.25□□□□□ -0.61
RPAIN-203ENST00000381209 TRAV23DV6A0A075B6W5 121 aa11.25□□□□□ -0.61
RPAIN-203ENST00000381209 SNCGO76070 127 aa11.25□□□□□ -0.61
RPAIN-203ENST00000381209 PLA2G2DQ9UNK4 145 aa11.25□□□□□ -0.61
RPAIN-203ENST00000381209 Q8N814 137 aa11.24□□□□□ -0.61
RPAIN-203ENST00000381209 C22orf24Q9Y442 160 aa11.24□□□□□ -0.61
RPAIN-203ENST00000381209 PSCAO43653 123 aa11.22□□□□□ -0.61
RPAIN-203ENST00000381209 LINC00575Q6W349 94 aa11.22□□□□□ -0.61
RPAIN-203ENST00000381209 TRBV7-6A0A0J9YX20 115 aa11.21□□□□□ -0.61
RPAIN-203ENST00000381209 NBDYA0A0U1RRE5 68 aa11.21□□□□□ -0.61
RPAIN-203ENST00000381209 DIRC1Q969H9 104 aa11.21□□□□□ -0.61
RPAIN-203ENST00000381209 ORMDL1Q9P0S3 153 aa11.21□□□□□ -0.61
RPAIN-203ENST00000381209 C14orf177Q52M58 125 aa11.2□□□□□ -0.62
RPAIN-203ENST00000381209 LOC107984640A0A0U1RRK4 108 aa11.19□□□□□ -0.62
RPAIN-203ENST00000381209 ZNF73O43830 326 aaPredicted RBP11.19□□□□□ -0.62
RPAIN-203ENST00000381209 COL7A1Q02388 2944 aa11.19□□□□□ -0.62
RPAIN-203ENST00000381209 IGLV5-37A0A075B6J1 123 aa11.19□□□□□ -0.62
RPAIN-203ENST00000381209 CNBPP62633 177 aaKnown RBP11.19□□□□□ -0.62
RPAIN-203ENST00000381209 NKAPP1Q8N9T2 125 aa11.18□□□□□ -0.62
RPAIN-203ENST00000381209 CDIP1Q9H305 208 aa11.18□□□□□ -0.62
RPAIN-203ENST00000381209 hADV29S1A0JD25 119 aa11.17□□□□□ -0.62
RPAIN-203ENST00000381209 INAFM2P0DMQ5 153 aa11.17□□□□□ -0.62
RPAIN-203ENST00000381209 COX7BP24311 80 aa11.16□□□□□ -0.62
RPAIN-203ENST00000381209 SERTAD4-AS1Q5TG53 156 aa11.16□□□□□ -0.62
RPAIN-203ENST00000381209 FAM240AA0A1B0GVK7 77 aa11.15□□□□□ -0.62
RPAIN-203ENST00000381209 ELOF1P60002 83 aaKnown RBP11.15□□□□□ -0.62
RPAIN-203ENST00000381209 GAGE2BQ13066 116 aa11.15□□□□□ -0.62
RPAIN-203ENST00000381209 OBSCN-AS1Q96MR7 158 aa11.15□□□□□ -0.62
RPAIN-203ENST00000381209 SIGMAR1Q99720 223 aa11.15□□□□□ -0.62
RPAIN-203ENST00000381209 TMEM256-PLSCR3K7ERE1 68 aa11.14□□□□□ -0.63
RPAIN-203ENST00000381209 C21orf62-AS1Q17RA5 79 aa11.14□□□□□ -0.63
RPAIN-203ENST00000381209 C7orf33Q8WU49 177 aa11.14□□□□□ -0.63
RPAIN-203ENST00000381209 KCNQ1DNQ9H478 68 aa11.14□□□□□ -0.63
RPAIN-203ENST00000381209 H3BQ85 93 aa11.13□□□□□ -0.63
RPAIN-203ENST00000381209 ACYP1P07311 99 aa11.11□□□□□ -0.63
RPAIN-203ENST00000381209 Q6ZRN7 208 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-203ENST00000381209 LRCOL1A6NCL2 159 aa11.1□□□□□ -0.63
RPAIN-203ENST00000381209 C16orf90A8MZG2 172 aa11.09□□□□□ -0.63
RPAIN-203ENST00000381209 FAM168BA1KXE4 195 aa11.09□□□□□ -0.63
RPAIN-203ENST00000381209 JMJD7-PLA2G4BH0Y9G9 81 aa11.09□□□□□ -0.63
RPAIN-203ENST00000381209 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.09□□□□□ -0.63
RPAIN-203ENST00000381209 KRTAP7-1Q8IUC3 87 aa11.09□□□□□ -0.63
RPAIN-203ENST00000381209 LINC00528Q8N1L1 170 aa11.09□□□□□ -0.63
RPAIN-203ENST00000381209 PRKDCP78527 4128 aaKnown RBP11.08□□□□□ -0.64
RPAIN-203ENST00000381209 PRYO14603 147 aa11.08□□□□□ -0.64
RPAIN-203ENST00000381209 GHRHP01286 108 aa11.08□□□□□ -0.64
RPAIN-203ENST00000381209 PKIGQ9Y2B9 76 aa11.08□□□□□ -0.64
RPAIN-203ENST00000381209 PLECQ15149 4684 aaKnown RBP11.08□□□□□ -0.64
RPAIN-203ENST00000381209 MEGF8Q7Z7M0 2845 aa11.07□□□□□ -0.64
RPAIN-203ENST00000381209 IGLV1-50A0A075B6I6 118 aa11.07□□□□□ -0.64
RPAIN-203ENST00000381209 Q6ZQY7 126 aa11.06□□□□□ -0.64
RPAIN-203ENST00000381209 XGP55808 180 aa11.05□□□□□ -0.64
RPAIN-203ENST00000381209 MRPL55Q7Z7F7 128 aaKnown RBP11.05□□□□□ -0.64
RPAIN-203ENST00000381209 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.04□□□□□ -0.64
RPAIN-203ENST00000381209 A0A096LNI7 61 aa11.04□□□□□ -0.64
RPAIN-203ENST00000381209 SPRR1AP35321 89 aa11.04□□□□□ -0.64
RPAIN-203ENST00000381209 FAM19A5Q7Z5A7 132 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 2007.3 ms