RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 C3orf79P0CE67 100 aa9.49□□□□□ -0.89
VCX3A-201ENST00000381089 TMEM170BQ5T4T1 132 aa9.49□□□□□ -0.89
VCX3A-201ENST00000381089 HIST1H2BLQ99880 126 aa9.49□□□□□ -0.89
VCX3A-201ENST00000381089 TOMM7Q9P0U1 55 aa9.49□□□□□ -0.89
VCX3A-201ENST00000381089 H3BRM9 83 aa9.48□□□□□ -0.89
VCX3A-201ENST00000381089 RPL28P46779 137 aaKnown RBP9.48□□□□□ -0.89
VCX3A-201ENST00000381089 C6orf226Q5I0X4 101 aa9.48□□□□□ -0.89
VCX3A-201ENST00000381089 C22orf24Q9Y442 160 aa9.48□□□□□ -0.89
VCX3A-201ENST00000381089 C5orf52A6NGY3 159 aa9.47□□□□□ -0.89
VCX3A-201ENST00000381089 SMIM1B2RUZ4 78 aa9.47□□□□□ -0.89
VCX3A-201ENST00000381089 CRYGAP11844 174 aa9.47□□□□□ -0.89
VCX3A-201ENST00000381089 TYMSOSQ8TAI1 123 aa9.47□□□□□ -0.89
VCX3A-201ENST00000381089 DPM2O94777 84 aa9.46□□□□□ -0.9
VCX3A-201ENST00000381089 PET117Q6UWS5 81 aa9.46□□□□□ -0.9
VCX3A-201ENST00000381089 PLNP26678 52 aa9.45□□□□□ -0.9
VCX3A-201ENST00000381089 Q8IZM0 81 aa9.45□□□□□ -0.9
VCX3A-201ENST00000381089 TP73-AS1Q9UF72 201 aa9.45□□□□□ -0.9
VCX3A-201ENST00000381089 BCE1O60756 84 aa9.44□□□□□ -0.9
VCX3A-201ENST00000381089 IGKCP01834 107 aa9.44□□□□□ -0.9
VCX3A-201ENST00000381089 LINC01545Q5VT33 79 aa9.44□□□□□ -0.9
VCX3A-201ENST00000381089 MRPL55Q7Z7F7 128 aaKnown RBP9.44□□□□□ -0.9
VCX3A-201ENST00000381089 XAGE1AQ9HD64 81 aa9.44□□□□□ -0.9
VCX3A-201ENST00000381089 A0A087X002 238 aa9.42□□□□□ -0.9
VCX3A-201ENST00000381089 TMEM223A0PJW6 202 aa9.42□□□□□ -0.9
VCX3A-201ENST00000381089 C20orf202A1L168 122 aa9.42□□□□□ -0.9
VCX3A-201ENST00000381089 COX7B2Q8TF08 81 aa9.42□□□□□ -0.9
VCX3A-201ENST00000381089 IGLV5-39A0A0G2JS06 123 aa9.41□□□□□ -0.9
VCX3A-201ENST00000381089 FAT4Q6V0I7 4981 aa9.4□□□□□ -0.9
VCX3A-201ENST00000381089 CXCL5P42830 114 aa9.4□□□□□ -0.9
VCX3A-201ENST00000381089 ATOH7Q8N100 152 aa9.4□□□□□ -0.9
VCX3A-201ENST00000381089 HERVK_113P61574 105 aa9.38□□□□□ -0.91
VCX3A-201ENST00000381089 UBE2AP49459 152 aa9.37□□□□□ -0.91
VCX3A-201ENST00000381089 LCE2AQ5TA79 106 aaPredicted RBP9.37□□□□□ -0.91
VCX3A-201ENST00000381089 CDIP1Q9H305 208 aa9.37□□□□□ -0.91
VCX3A-201ENST00000381089 RPL37AP8A6NKH3 93 aa9.36□□□□□ -0.91
VCX3A-201ENST00000381089 LINC00167Q96N53 147 aa9.36□□□□□ -0.91
VCX3A-201ENST00000381089 SCGB1D1O95968 90 aa9.35□□□□□ -0.91
VCX3A-201ENST00000381089 TSPEAR-AS2P59090 65 aa9.35□□□□□ -0.91
VCX3A-201ENST00000381089 FAM229BQ4G0N7 80 aa9.35□□□□□ -0.91
VCX3A-201ENST00000381089 LINC00304Q8N9R0 145 aa9.35□□□□□ -0.91
VCX3A-201ENST00000381089 LEPROTO15243 131 aa9.34□□□□□ -0.91
VCX3A-201ENST00000381089 NKAPP1Q8N9T2 125 aa9.34□□□□□ -0.91
VCX3A-201ENST00000381089 GAGE10A6NGK3 116 aa9.33□□□□□ -0.92
VCX3A-201ENST00000381089 PLEKHB2Q96CS7 222 aa9.33□□□□□ -0.92
VCX3A-201ENST00000381089 ZNF625Q96I27 306 aaPredicted RBP9.33□□□□□ -0.92
VCX3A-201ENST00000381089 RETNLBQ9BQ08 111 aa9.33□□□□□ -0.92
VCX3A-201ENST00000381089 ANAPC11Q9NYG5 84 aa9.33□□□□□ -0.92
VCX3A-201ENST00000381089 IGKV2D-26A0A0A0MRZ7 120 aa9.32□□□□□ -0.92
VCX3A-201ENST00000381089 E9PLD3 99 aa9.32□□□□□ -0.92
VCX3A-201ENST00000381089 J3QQQ9 107 aa9.32□□□□□ -0.92
VCX3A-201ENST00000381089 LGALS3P17931 250 aaKnown RBP9.32□□□□□ -0.92
VCX3A-201ENST00000381089 TPRXLQ17RH7 258 aa9.32□□□□□ -0.92
VCX3A-201ENST00000381089 NDUFA12Q9UI09 145 aa9.32□□□□□ -0.92
VCX3A-201ENST00000381089 CTAG1AP78358 180 aa9.31□□□□□ -0.92
VCX3A-201ENST00000381089 KRTAP13-2Q52LG2 175 aa9.31□□□□□ -0.92
VCX3A-201ENST00000381089 ANKRD39Q53RE8 183 aa9.31□□□□□ -0.92
VCX3A-201ENST00000381089 IGLV7-46A0A075B6I9 117 aa9.3□□□□□ -0.92
VCX3A-201ENST00000381089 IGLV5-37A0A075B6J1 123 aa9.3□□□□□ -0.92
VCX3A-201ENST00000381089 KRTAP9-6A0A140TA67 174 aa9.3□□□□□ -0.92
VCX3A-201ENST00000381089 AKR1D1P51857 326 aa9.3□□□□□ -0.92
VCX3A-201ENST00000381089 MUC17Q685J3 4493 aa9.29□□□□□ -0.92
VCX3A-201ENST00000381089 PFN2P35080 140 aa9.29□□□□□ -0.92
VCX3A-201ENST00000381089 KRTAP13-1Q8IUC0 172 aa9.29□□□□□ -0.92
VCX3A-201ENST00000381089 MYMXA0A1B0GTQ4 84 aa9.28□□□□□ -0.92
VCX3A-201ENST00000381089 NMUP48645 174 aa9.28□□□□□ -0.92
VCX3A-201ENST00000381089 ERG28Q9UKR5 140 aa9.28□□□□□ -0.92
VCX3A-201ENST00000381089 A0A0U1RRA0 63 aa9.27□□□□□ -0.93
VCX3A-201ENST00000381089 HSBP1L1C9JCN9 74 aa9.27□□□□□ -0.93
VCX3A-201ENST00000381089 MEIG1Q5JSS6 88 aa9.27□□□□□ -0.93
VCX3A-201ENST00000381089 SFTA2Q6UW10 78 aa9.27□□□□□ -0.93
VCX3A-201ENST00000381089 TTTY13Q9BZ97 58 aa9.27□□□□□ -0.93
VCX3A-201ENST00000381089 IGKV2-28A0A075B6P5 120 aa9.26□□□□□ -0.93
VCX3A-201ENST00000381089 IGKV2D-28P01615 120 aa9.26□□□□□ -0.93
VCX3A-201ENST00000381089 JOSD1Q15040 202 aaPredicted RBP9.26□□□□□ -0.93
VCX3A-201ENST00000381089 LINC00158P58513 81 aa9.25□□□□□ -0.93
VCX3A-201ENST00000381089 HERV-K104P63124 156 aa9.25□□□□□ -0.93
VCX3A-201ENST00000381089 ZNF815PA8K554 130 aa9.24□□□□□ -0.93
VCX3A-201ENST00000381089 SMIM13P0DJ93 91 aa9.24□□□□□ -0.93
VCX3A-201ENST00000381089 FAM19A1Q7Z5A9 133 aa9.24□□□□□ -0.93
VCX3A-201ENST00000381089 PRLHP81277 87 aa9.23□□□□□ -0.93
VCX3A-201ENST00000381089 PYY3Q5JQD4 70 aa9.23□□□□□ -0.93
VCX3A-201ENST00000381089 PCP2Q8IVA1 136 aa9.23□□□□□ -0.93
VCX3A-201ENST00000381089 PPDPFQ9H3Y8 114 aa9.23□□□□□ -0.93
VCX3A-201ENST00000381089 A0A0J9YXY3 114 aa9.21□□□□□ -0.94
VCX3A-201ENST00000381089 SPAG11AQ6PDA7 123 aa9.21□□□□□ -0.94
VCX3A-201ENST00000381089 TMEM126AQ9H061 195 aa9.21□□□□□ -0.94
VCX3A-201ENST00000381089 PAM16Q9Y3D7 125 aa9.21□□□□□ -0.94
VCX3A-201ENST00000381089 RPL24P83731 157 aaKnown RBP9.2□□□□□ -0.94
VCX3A-201ENST00000381089 COX17Q14061 63 aa9.2□□□□□ -0.94
VCX3A-201ENST00000381089 MIR7-3HGQ8N6C7 128 aa9.2□□□□□ -0.94
VCX3A-201ENST00000381089 DAND5Q8N907 189 aa9.2□□□□□ -0.94
VCX3A-201ENST00000381089 VAMP8Q9BV40 100 aa9.2□□□□□ -0.94
VCX3A-201ENST00000381089 SND1-IT1Q9HBX3 110 aa9.2□□□□□ -0.94
VCX3A-201ENST00000381089 LINC00587B1AMM8 73 aa9.18□□□□□ -0.94
VCX3A-201ENST00000381089 SPATA45Q537H7 98 aa9.18□□□□□ -0.94
VCX3A-201ENST00000381089 C4orf48Q5BLP8 95 aa9.18□□□□□ -0.94
VCX3A-201ENST00000381089 SCGB1D4Q6XE38 83 aa9.18□□□□□ -0.94
VCX3A-201ENST00000381089 FP248Q71RG6 208 aaPredicted RBP9.18□□□□□ -0.94
VCX3A-201ENST00000381089 LINC00337Q8N6G1 96 aa9.18□□□□□ -0.94
VCX3A-201ENST00000381089 TMEM238C9JI98 176 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms