RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 C16orf90A8MZG2 172 aa13.14□□□□□ -0.31
TSSC4-203ENST00000380996 FXYD2P54710 66 aa13.14□□□□□ -0.31
TSSC4-203ENST00000380996 FRAS1Q86XX4 4008 aa13.14□□□□□ -0.31
TSSC4-203ENST00000380996 A4D1N5 150 aa13.13□□□□□ -0.31
TSSC4-203ENST00000380996 SDIM1Q6ZPB5 146 aa13.13□□□□□ -0.31
TSSC4-203ENST00000380996 BATFQ16520 125 aa13.12□□□□□ -0.31
TSSC4-203ENST00000380996 LINC01620Q4KN68 170 aa13.12□□□□□ -0.31
TSSC4-203ENST00000380996 LINC00474Q9P2X8 69 aa13.12□□□□□ -0.31
TSSC4-203ENST00000380996 NDUFC2O95298 119 aa13.11□□□□□ -0.31
TSSC4-203ENST00000380996 FUSP35637 526 aaKnown RBP eCLIP13.11□□□□□ -0.31
TSSC4-203ENST00000380996 KRTAP10-2P60368 255 aa13.11□□□□□ -0.31
TSSC4-203ENST00000380996 C9orf129Q5T035 196 aaKnown RBP13.11□□□□□ -0.31
TSSC4-203ENST00000380996 A0A096LNI7 61 aa13.1□□□□□ -0.31
TSSC4-203ENST00000380996 IGKV2-24A0A0C4DH68 120 aa13.09□□□□□ -0.31
TSSC4-203ENST00000380996 A6NDN8 102 aa13.09□□□□□ -0.31
TSSC4-203ENST00000380996 NHP2Q9NX24 153 aaKnown RBP13.08□□□□□ -0.31
TSSC4-203ENST00000380996 SNHG12Q9BXW3 62 aa13.08□□□□□ -0.32
TSSC4-203ENST00000380996 PLA2G2DQ9UNK4 145 aa13.07□□□□□ -0.32
TSSC4-203ENST00000380996 FAT2Q9NYQ8 4349 aa13.06□□□□□ -0.32
TSSC4-203ENST00000380996 CFC1BP0CG36 223 aa13.06□□□□□ -0.32
TSSC4-203ENST00000380996 CFC1P0CG37 223 aa13.06□□□□□ -0.32
TSSC4-203ENST00000380996 RAB37Q96AX2 223 aa13.05□□□□□ -0.32
TSSC4-203ENST00000380996 A0A0B4J2C4 111 aa13.04□□□□□ -0.32
TSSC4-203ENST00000380996 A0A1B0GWB2 263 aa13.03□□□□□ -0.32
TSSC4-203ENST00000380996 CHTF8P0CG12 524 aa13.03□□□□□ -0.32
TSSC4-203ENST00000380996 VPREB1P12018 145 aa13.03□□□□□ -0.32
TSSC4-203ENST00000380996 TRAV13-2A0A0B4J235 113 aa13.03□□□□□ -0.32
TSSC4-203ENST00000380996 TRBV10-2A0A0K0K1G8 114 aa13.03□□□□□ -0.32
TSSC4-203ENST00000380996 Q8NDZ9 215 aa13.03□□□□□ -0.32
TSSC4-203ENST00000380996 DPH3Q96FX2 82 aa13.03□□□□□ -0.32
TSSC4-203ENST00000380996 IGKV2-28A0A075B6P5 120 aa13.02□□□□□ -0.33
TSSC4-203ENST00000380996 IGKV2D-28P01615 120 aa13.02□□□□□ -0.33
TSSC4-203ENST00000380996 PRR3P79522 188 aaKnown RBP13.02□□□□□ -0.33
TSSC4-203ENST00000380996 NKAPP1Q8N9T2 125 aa13.02□□□□□ -0.33
TSSC4-203ENST00000380996 A0A1B0GVY2 172 aa13.01□□□□□ -0.33
TSSC4-203ENST00000380996 SERTAD4-AS1Q5TG53 156 aa13.01□□□□□ -0.33
TSSC4-203ENST00000380996 HECTD4Q9Y4D8 3996 aa13.01□□□□□ -0.33
TSSC4-203ENST00000380996 DNAH11Q96DT5 4516 aa13.01□□□□□ -0.33
TSSC4-203ENST00000380996 IGLV5-37A0A075B6J1 123 aa13□□□□□ -0.33
TSSC4-203ENST00000380996 FAM168BA1KXE4 195 aa13□□□□□ -0.33
TSSC4-203ENST00000380996 M0R378 163 aa13□□□□□ -0.33
TSSC4-203ENST00000380996 NCR3O14931 201 aa13□□□□□ -0.33
TSSC4-203ENST00000380996 SPACA4Q8TDM5 124 aa13□□□□□ -0.33
TSSC4-203ENST00000380996 PRO1854Q9UHT4 67 aa13□□□□□ -0.33
TSSC4-203ENST00000380996 K7ERJ3 54 aa12.99□□□□□ -0.33
TSSC4-203ENST00000380996 COL5A1-AS1Q5SY13 56 aa12.99□□□□□ -0.33
TSSC4-203ENST00000380996 FAM19A5Q7Z5A7 132 aaPredicted RBP12.99□□□□□ -0.33
TSSC4-203ENST00000380996 LINC00337Q8N6G1 96 aa12.98□□□□□ -0.33
TSSC4-203ENST00000380996 OR13C6PQ8NH95 151 aa12.98□□□□□ -0.33
TSSC4-203ENST00000380996 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.98□□□□□ -0.33
TSSC4-203ENST00000380996 S100A7L2Q5SY68 101 aa12.98□□□□□ -0.33
TSSC4-203ENST00000380996 A0A1W2PNN7 141 aa12.97□□□□□ -0.33
TSSC4-203ENST00000380996 PANO1I0J062 215 aa12.97□□□□□ -0.33
TSSC4-203ENST00000380996 TMEM126AQ9H061 195 aa12.97□□□□□ -0.33
TSSC4-203ENST00000380996 C22orf24Q9Y442 160 aa12.97□□□□□ -0.33
TSSC4-203ENST00000380996 RPL13AP40429 203 aaKnown RBP12.95□□□□□ -0.34
TSSC4-203ENST00000380996 KRTAP7-1Q8IUC3 87 aa12.95□□□□□ -0.34
TSSC4-203ENST00000380996 KRTAP10-1P60331 282 aa12.94□□□□□ -0.34
TSSC4-203ENST00000380996 PKD1P98161 4303 aa12.94□□□□□ -0.34
TSSC4-203ENST00000380996 M0QXV9 152 aa12.93□□□□□ -0.34
TSSC4-203ENST00000380996 LBHQ53QV2 105 aaPredicted RBP12.93□□□□□ -0.34
TSSC4-203ENST00000380996 MRPL55Q7Z7F7 128 aaKnown RBP12.93□□□□□ -0.34
TSSC4-203ENST00000380996 A0A087WYN8 130 aa12.93□□□□□ -0.34
TSSC4-203ENST00000380996 C7orf33Q8WU49 177 aa12.93□□□□□ -0.34
TSSC4-203ENST00000380996 H7C2G1 150 aa12.92□□□□□ -0.34
TSSC4-203ENST00000380996 IGLV6-57P01721 117 aa12.92□□□□□ -0.34
TSSC4-203ENST00000380996 Q1RN00 199 aa12.92□□□□□ -0.34
TSSC4-203ENST00000380996 CBY1Q9Y3M2 126 aa12.92□□□□□ -0.34
TSSC4-203ENST00000380996 TRBV10-3A0A0K0K1G6 114 aa12.91□□□□□ -0.34
TSSC4-203ENST00000380996 GAGE10A6NGK3 116 aa12.9□□□□□ -0.34
TSSC4-203ENST00000380996 EPM2AB3EWF7 344 aa12.9□□□□□ -0.34
TSSC4-203ENST00000380996 Q6ZSA8 131 aa12.9□□□□□ -0.34
TSSC4-203ENST00000380996 PLAC8Q9NZF1 115 aa12.9□□□□□ -0.34
TSSC4-203ENST00000380996 LINC00167Q96N53 147 aa12.89□□□□□ -0.35
TSSC4-203ENST00000380996 EPPK1P58107 5090 aaKnown RBP12.88□□□□□ -0.35
TSSC4-203ENST00000380996 TAX1BP3O14907 124 aa12.88□□□□□ -0.35
TSSC4-203ENST00000380996 DNAH5Q8TE73 4624 aa12.88□□□□□ -0.35
TSSC4-203ENST00000380996 TSPAN13O95857 204 aa12.88□□□□□ -0.35
TSSC4-203ENST00000380996 FAM30AQ9NZY2 134 aa12.88□□□□□ -0.35
TSSC4-203ENST00000380996 IGLV1-50A0A075B6I6 118 aa12.86□□□□□ -0.35
TSSC4-203ENST00000380996 C9orf118A6NHY6 69 aa12.85□□□□□ -0.35
TSSC4-203ENST00000380996 RPL37AP8A6NKH3 93 aa12.85□□□□□ -0.35
TSSC4-203ENST00000380996 PHF5AQ7RTV0 110 aaKnown RBP12.85□□□□□ -0.35
TSSC4-203ENST00000380996 SMIM11BQ8TCY0 68 aa12.85□□□□□ -0.35
TSSC4-203ENST00000380996 TRAV23DV6A0A075B6W5 121 aa12.84□□□□□ -0.35
TSSC4-203ENST00000380996 RPL28P46779 137 aaKnown RBP12.84□□□□□ -0.35
TSSC4-203ENST00000380996 PSMB2P49721 201 aa12.84□□□□□ -0.35
TSSC4-203ENST00000380996 UBE2BP63146 152 aa12.84□□□□□ -0.35
TSSC4-203ENST00000380996 KCNQ1DNQ9H478 68 aa12.83□□□□□ -0.35
TSSC4-203ENST00000380996 CIRBP-AS1Q8TBR5 109 aa12.83□□□□□ -0.36
TSSC4-203ENST00000380996 H3BUT2 72 aa12.82□□□□□ -0.36
TSSC4-203ENST00000380996 PRYO14603 147 aa12.81□□□□□ -0.36
TSSC4-203ENST00000380996 COX6CP09669 75 aa12.81□□□□□ -0.36
TSSC4-203ENST00000380996 SCXQ7RTU7 201 aa12.81□□□□□ -0.36
TSSC4-203ENST00000380996 ZNF73O43830 326 aaPredicted RBP12.8□□□□□ -0.36
TSSC4-203ENST00000380996 NAA38Q9BRA0 125 aaKnown RBP12.8□□□□□ -0.36
TSSC4-203ENST00000380996 TRIAP1O43715 76 aa12.79□□□□□ -0.36
TSSC4-203ENST00000380996 DIRC1Q969H9 104 aa12.79□□□□□ -0.36
TSSC4-203ENST00000380996 SCGB1C2P0DMR2 95 aa12.78□□□□□ -0.36
TSSC4-203ENST00000380996 VAMP3Q15836 100 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms