RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 C10orf25Q5T742 122 aa11.07□□□□□ -0.64
NKX3-1-201ENST00000380871 CFAP161Q6P656 301 aa11.07□□□□□ -0.64
NKX3-1-201ENST00000380871 RPL18AQ02543 176 aaKnown RBP11.06□□□□□ -0.64
NKX3-1-201ENST00000380871 SPART-AS1P0CW21 52 aa11.06□□□□□ -0.64
NKX3-1-201ENST00000380871 REG3AQ06141 175 aa11.06□□□□□ -0.64
NKX3-1-201ENST00000380871 CD164L2Q6UWJ8 174 aa11.06□□□□□ -0.64
NKX3-1-201ENST00000380871 LOC107984640A0A0U1RRK4 108 aa11.05□□□□□ -0.64
NKX3-1-201ENST00000380871 ATOX1O00244 68 aa11.05□□□□□ -0.64
NKX3-1-201ENST00000380871 CCKP06307 115 aa11.05□□□□□ -0.64
NKX3-1-201ENST00000380871 Q8NAQ8 132 aa11.05□□□□□ -0.64
NKX3-1-201ENST00000380871 KLK12Q9UKR0 248 aa11.04□□□□□ -0.64
NKX3-1-201ENST00000380871 LINC00167Q96N53 147 aa11.04□□□□□ -0.64
NKX3-1-201ENST00000380871 UNQ6190/PRO20217Q6UXQ8 127 aa11.03□□□□□ -0.64
NKX3-1-201ENST00000380871 PRB2P02812 416 aaPredicted RBP11.03□□□□□ -0.64
NKX3-1-201ENST00000380871 USP17L23D6RBM5 183 aa11.02□□□□□ -0.65
NKX3-1-201ENST00000380871 MIFP14174 115 aa11.01□□□□□ -0.65
NKX3-1-201ENST00000380871 S100A7L2Q5SY68 101 aa11.01□□□□□ -0.65
NKX3-1-201ENST00000380871 NDUFC2O95298 119 aa11□□□□□ -0.65
NKX3-1-201ENST00000380871 CRYGAP11844 174 aa11□□□□□ -0.65
NKX3-1-201ENST00000380871 FAM19A1Q7Z5A9 133 aa11□□□□□ -0.65
NKX3-1-201ENST00000380871 COL6A5A8TX70 2615 aa11□□□□□ -0.65
NKX3-1-201ENST00000380871 TMEM256-PLSCR3K7ERE1 68 aa10.99□□□□□ -0.65
NKX3-1-201ENST00000380871 KRTAP10-11P60412 298 aa10.99□□□□□ -0.65
NKX3-1-201ENST00000380871 PKD1L1Q8TDX9 2849 aa10.99□□□□□ -0.65
NKX3-1-201ENST00000380871 KRTAP24-1Q3LI83 254 aa10.99□□□□□ -0.65
NKX3-1-201ENST00000380871 M0R2N4 97 aa10.99□□□□□ -0.65
NKX3-1-201ENST00000380871 COX17Q14061 63 aa10.99□□□□□ -0.65
NKX3-1-201ENST00000380871 JMJD7-PLA2G4BH0Y9G9 81 aa10.98□□□□□ -0.65
NKX3-1-201ENST00000380871 SPAG11BQ08648 103 aa10.98□□□□□ -0.65
NKX3-1-201ENST00000380871 ENHOQ6UWT2 76 aa10.98□□□□□ -0.65
NKX3-1-201ENST00000380871 TRAV23DV6A0A075B6W5 121 aa10.97□□□□□ -0.65
NKX3-1-201ENST00000380871 FBN1P35555 2871 aaKnown RBP10.97□□□□□ -0.65
NKX3-1-201ENST00000380871 LINC00575Q6W349 94 aa10.97□□□□□ -0.65
NKX3-1-201ENST00000380871 SERP2Q8N6R1 65 aa10.97□□□□□ -0.65
NKX3-1-201ENST00000380871 CYSRT1A8MQ03 144 aa10.96□□□□□ -0.65
NKX3-1-201ENST00000380871 UPK3BQ9BT76 320 aa10.96□□□□□ -0.66
NKX3-1-201ENST00000380871 TENM3Q9P273 2699 aa10.95□□□□□ -0.66
NKX3-1-201ENST00000380871 Q6ZTC4 211 aa10.95□□□□□ -0.66
NKX3-1-201ENST00000380871 XAGE1AQ9HD64 81 aa10.94□□□□□ -0.66
NKX3-1-201ENST00000380871 LAMTOR3Q9UHA4 124 aa10.92□□□□□ -0.66
NKX3-1-201ENST00000380871 WFDC10BQ8IUB3 73 aa10.92□□□□□ -0.66
NKX3-1-201ENST00000380871 MRAPQ8TCY5 172 aa10.92□□□□□ -0.66
NKX3-1-201ENST00000380871 KPRPQ5T749 579 aaPredicted RBP10.91□□□□□ -0.66
NKX3-1-201ENST00000380871 LELP1Q5T871 98 aa10.91□□□□□ -0.66
NKX3-1-201ENST00000380871 Q6ZQY7 126 aa10.91□□□□□ -0.66
NKX3-1-201ENST00000380871 GHRHP01286 108 aa10.91□□□□□ -0.66
NKX3-1-201ENST00000380871 HIGD2BQ4VC39 106 aa10.9□□□□□ -0.66
NKX3-1-201ENST00000380871 LYPD5Q6UWN5 251 aa10.9□□□□□ -0.66
NKX3-1-201ENST00000380871 Q6ZQT0 140 aa10.9□□□□□ -0.66
NKX3-1-201ENST00000380871 TRBV10-3A0A0K0K1G6 114 aa10.9□□□□□ -0.67
NKX3-1-201ENST00000380871 RBM3P98179 157 aaKnown RBP10.9□□□□□ -0.67
NKX3-1-201ENST00000380871 UBL5Q9BZL1 73 aa10.9□□□□□ -0.67
NKX3-1-201ENST00000380871 A0A0J9YWU9 116 aa10.89□□□□□ -0.67
NKX3-1-201ENST00000380871 IGLV6-57P01721 117 aa10.89□□□□□ -0.67
NKX3-1-201ENST00000380871 DSCR8Q96T75 97 aa10.89□□□□□ -0.67
NKX3-1-201ENST00000380871 C6orf48Q9UBA6 75 aa10.88□□□□□ -0.67
NKX3-1-201ENST00000380871 J3KT08 172 aa10.87□□□□□ -0.67
NKX3-1-201ENST00000380871 ZNF561-AS1K7EIQ3 104 aa10.87□□□□□ -0.67
NKX3-1-201ENST00000380871 FAM19A5Q7Z5A7 132 aaPredicted RBP10.87□□□□□ -0.67
NKX3-1-201ENST00000380871 PRR34Q9NV39 138 aa10.85□□□□□ -0.67
NKX3-1-201ENST00000380871 OXTP01178 125 aa10.85□□□□□ -0.67
NKX3-1-201ENST00000380871 HAMPP81172 84 aa10.85□□□□□ -0.67
NKX3-1-201ENST00000380871 ATP5EP2Q5VTU8 51 aa10.85□□□□□ -0.67
NKX3-1-201ENST00000380871 MGAM2Q2M2H8 2515 aa10.85□□□□□ -0.67
NKX3-1-201ENST00000380871 DPH3Q96FX2 82 aa10.83□□□□□ -0.68
NKX3-1-201ENST00000380871 LINC01547P58512 204 aaPredicted RBP10.82□□□□□ -0.68
NKX3-1-201ENST00000380871 Q6ZVQ6 151 aa10.82□□□□□ -0.68
NKX3-1-201ENST00000380871 ANK2Q01484 3957 aa10.82□□□□□ -0.68
NKX3-1-201ENST00000380871 LOC110117498A0A087WWA1 95 aa10.82□□□□□ -0.68
NKX3-1-201ENST00000380871 DEFB131BA0A096LNP1 70 aa10.82□□□□□ -0.68
NKX3-1-201ENST00000380871 TMEM258P61165 79 aa10.82□□□□□ -0.68
NKX3-1-201ENST00000380871 ESRGQ1W209 222 aa10.82□□□□□ -0.68
NKX3-1-201ENST00000380871 C20orf197Q8N268 126 aa10.82□□□□□ -0.68
NKX3-1-201ENST00000380871 SCXQ7RTU7 201 aa10.82□□□□□ -0.68
NKX3-1-201ENST00000380871 NBEAL1Q6ZS30 2694 aa10.81□□□□□ -0.68
NKX3-1-201ENST00000380871 C11orf45Q8TAV5 145 aa10.8□□□□□ -0.68
NKX3-1-201ENST00000380871 DIRC1Q969H9 104 aa10.8□□□□□ -0.68
NKX3-1-201ENST00000380871 IGKV2D-24A0A075B6R9 120 aa10.8□□□□□ -0.68
NKX3-1-201ENST00000380871 ZNF73O43830 326 aaPredicted RBP10.8□□□□□ -0.68
NKX3-1-201ENST00000380871 WIPF1O43516 503 aa10.79□□□□□ -0.68
NKX3-1-201ENST00000380871 TRAV10A0A0B4J240 114 aa10.79□□□□□ -0.68
NKX3-1-201ENST00000380871 BAHCC1Q9P281 2608 aa10.78□□□□□ -0.68
NKX3-1-201ENST00000380871 MUC7Q8TAX7 377 aa10.78□□□□□ -0.68
NKX3-1-201ENST00000380871 CAMK2N2Q96S95 79 aa10.78□□□□□ -0.68
NKX3-1-201ENST00000380871 GVQW2A0A096LPI5 108 aaPredicted RBP10.77□□□□□ -0.69
NKX3-1-201ENST00000380871 COX7BP24311 80 aa10.76□□□□□ -0.69
NKX3-1-201ENST00000380871 Q6ZRU5 148 aa10.76□□□□□ -0.69
NKX3-1-201ENST00000380871 RPS28P62857 69 aaKnown RBP10.75□□□□□ -0.69
NKX3-1-201ENST00000380871 VPREB1P12018 145 aa10.75□□□□□ -0.69
NKX3-1-201ENST00000380871 ELOF1P60002 83 aaKnown RBP10.74□□□□□ -0.69
NKX3-1-201ENST00000380871 C1orf43Q9BWL3 253 aa10.73□□□□□ -0.69
NKX3-1-201ENST00000380871 TRBV7-4A0A0J9YYF1 115 aa10.72□□□□□ -0.69
NKX3-1-201ENST00000380871 KRTAP26-1Q6PEX3 210 aa10.72□□□□□ -0.69
NKX3-1-201ENST00000380871 SNURFQ9Y675 71 aa10.72□□□□□ -0.69
NKX3-1-201ENST00000380871 EGFEM1PQ0D2K5 195 aa10.71□□□□□ -0.69
NKX3-1-201ENST00000380871 C15orf56Q8N910 161 aa10.71□□□□□ -0.69
NKX3-1-201ENST00000380871 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.71□□□□□ -0.7
NKX3-1-201ENST00000380871 Q8N9L7 120 aa10.7□□□□□ -0.7
NKX3-1-201ENST00000380871 Q6ZRP5 223 aa10.69□□□□□ -0.7
NKX3-1-201ENST00000380871 TRAV7A0A075B6U4 112 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms