RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 PRRC2AP48634 2157 aaKnown RBP11.65□□□□□ -0.54
SNAPC3-202ENST00000380821 TET2Q6N021 2002 aaPredicted RBP11.65□□□□□ -0.54
SNAPC3-202ENST00000380821 FSHBP01225 129 aa11.64□□□□□ -0.55
SNAPC3-202ENST00000380821 IGLV6-57P01721 117 aa11.64□□□□□ -0.55
SNAPC3-202ENST00000380821 AGRNO00468 2067 aa11.64□□□□□ -0.55
SNAPC3-202ENST00000380821 FAM208BQ5VWN6 2430 aa11.64□□□□□ -0.55
SNAPC3-202ENST00000380821 ST20-AS1Q8NBB2 130 aa11.61□□□□□ -0.55
SNAPC3-202ENST00000380821 LOC101927531A0A1B0GV80 90 aa11.61□□□□□ -0.55
SNAPC3-202ENST00000380821 EPM2AB3EWF7 344 aa11.61□□□□□ -0.55
SNAPC3-202ENST00000380821 CYP4F30PQ9H0H9 118 aa11.61□□□□□ -0.55
SNAPC3-202ENST00000380821 C16orf90A8MZG2 172 aa11.61□□□□□ -0.55
SNAPC3-202ENST00000380821 LINC00313P59037 77 aa11.61□□□□□ -0.55
SNAPC3-202ENST00000380821 PTPRQQ9UMZ3 2332 aa11.6□□□□□ -0.55
SNAPC3-202ENST00000380821 SPACA4Q8TDM5 124 aa11.6□□□□□ -0.55
SNAPC3-202ENST00000380821 PHF5AQ7RTV0 110 aaKnown RBP11.6□□□□□ -0.55
SNAPC3-202ENST00000380821 A8MWP4 228 aa11.59□□□□□ -0.55
SNAPC3-202ENST00000380821 RPL37AP61513 92 aaKnown RBP11.59□□□□□ -0.55
SNAPC3-202ENST00000380821 PTPRBP23467 1997 aa11.58□□□□□ -0.55
SNAPC3-202ENST00000380821 COL4A2P08572 1712 aa11.58□□□□□ -0.56
SNAPC3-202ENST00000380821 SORL1Q92673 2214 aa11.56□□□□□ -0.56
SNAPC3-202ENST00000380821 WNK1Q9H4A3 2382 aa11.55□□□□□ -0.56
SNAPC3-202ENST00000380821 COA5Q86WW8 74 aa11.55□□□□□ -0.56
SNAPC3-202ENST00000380821 COL27A1Q8IZC6 1860 aaPredicted RBP11.54□□□□□ -0.56
SNAPC3-202ENST00000380821 MUC6Q6W4X9 2439 aa11.54□□□□□ -0.56
SNAPC3-202ENST00000380821 K7EQZ3 153 aa11.53□□□□□ -0.56
SNAPC3-202ENST00000380821 SSBP3-AS1Q7Z2R9 100 aa11.53□□□□□ -0.56
SNAPC3-202ENST00000380821 Q6ZRP5 223 aa11.52□□□□□ -0.57
SNAPC3-202ENST00000380821 KLKP1Q107X0 134 aa11.52□□□□□ -0.57
SNAPC3-202ENST00000380821 Q8NAQ8 132 aa11.52□□□□□ -0.57
SNAPC3-202ENST00000380821 PRR15Q8IV56 129 aa11.5□□□□□ -0.57
SNAPC3-202ENST00000380821 MRPL34Q9BQ48 92 aaKnown RBP11.49□□□□□ -0.57
SNAPC3-202ENST00000380821 RTL8CO15255 209 aa11.49□□□□□ -0.57
SNAPC3-202ENST00000380821 KCNQ1DNQ9H478 68 aa11.48□□□□□ -0.57
SNAPC3-202ENST00000380821 FAM229AH3BQW9 127 aa11.48□□□□□ -0.57
SNAPC3-202ENST00000380821 IGLV1-50A0A075B6I6 118 aa11.48□□□□□ -0.57
SNAPC3-202ENST00000380821 LINC00588Q9Y4M8 146 aa11.46□□□□□ -0.57
SNAPC3-202ENST00000380821 RBM12B-AS1Q9P1G2 102 aa11.46□□□□□ -0.57
SNAPC3-202ENST00000380821 LINC00528Q8N1L1 170 aa11.45□□□□□ -0.58
SNAPC3-202ENST00000380821 DNAH10OSP0CZ25 163 aa11.44□□□□□ -0.58
SNAPC3-202ENST00000380821 NBDYA0A0U1RRE5 68 aa11.44□□□□□ -0.58
SNAPC3-202ENST00000380821 CHTF8P0CG12 524 aa11.44□□□□□ -0.58
SNAPC3-202ENST00000380821 IGLV8-61A0A075B6I0 122 aa11.43□□□□□ -0.58
SNAPC3-202ENST00000380821 TYMSOSQ8TAI1 123 aa11.42□□□□□ -0.58
SNAPC3-202ENST00000380821 UQCR11O14957 56 aa11.42□□□□□ -0.58
SNAPC3-202ENST00000380821 FAM168BA1KXE4 195 aa11.42□□□□□ -0.58
SNAPC3-202ENST00000380821 Q96NJ1 140 aa11.41□□□□□ -0.58
SNAPC3-202ENST00000380821 LINC01600Q96MT4 127 aa11.4□□□□□ -0.58
SNAPC3-202ENST00000380821 IGFL1Q6UW32 110 aa11.4□□□□□ -0.59
SNAPC3-202ENST00000380821 CSPG4Q6UVK1 2322 aa11.39□□□□□ -0.59
SNAPC3-202ENST00000380821 SPG11Q96JI7 2443 aa11.38□□□□□ -0.59
SNAPC3-202ENST00000380821 H7BZZ5 65 aa11.38□□□□□ -0.59
SNAPC3-202ENST00000380821 EIF4EBP3O60516 100 aaPredicted RBP11.37□□□□□ -0.59
SNAPC3-202ENST00000380821 CSNK1G2-AS1Q8NCQ2 148 aa11.36□□□□□ -0.59
SNAPC3-202ENST00000380821 C8orf17Q9NRJ1 99 aa11.36□□□□□ -0.59
SNAPC3-202ENST00000380821 OTOGLQ3ZCN5 2332 aa11.36□□□□□ -0.59
SNAPC3-202ENST00000380821 PLA2G1BP04054 148 aaKnown RBP11.35□□□□□ -0.59
SNAPC3-202ENST00000380821 ACACBO00763 2458 aa11.35□□□□□ -0.59
SNAPC3-202ENST00000380821 MIR22HGQ0VDD5 57 aa11.34□□□□□ -0.59
SNAPC3-202ENST00000380821 PRR34Q9NV39 138 aa11.32□□□□□ -0.6
SNAPC3-202ENST00000380821 PLA2G2DQ9UNK4 145 aa11.32□□□□□ -0.6
SNAPC3-202ENST00000380821 Q8N377 158 aa11.31□□□□□ -0.6
SNAPC3-202ENST00000380821 A0A1B0GVX0 72 aa11.31□□□□□ -0.6
SNAPC3-202ENST00000380821 C15orf56Q8N910 161 aa11.29□□□□□ -0.6
SNAPC3-202ENST00000380821 TLX1NBP0CAT3 122 aa11.27□□□□□ -0.6
SNAPC3-202ENST00000380821 PCSK5Q92824 1860 aa11.27□□□□□ -0.61
SNAPC3-202ENST00000380821 C9orf129Q5T035 196 aaKnown RBP11.27□□□□□ -0.61
SNAPC3-202ENST00000380821 NAV2Q8IVL1 2488 aa11.27□□□□□ -0.61
SNAPC3-202ENST00000380821 CUL9Q8IWT3 2517 aa11.26□□□□□ -0.61
SNAPC3-202ENST00000380821 DSCR10P59022 87 aa11.26□□□□□ -0.61
SNAPC3-202ENST00000380821 SPANXA2-OT1Q8N9U9 137 aa11.26□□□□□ -0.61
SNAPC3-202ENST00000380821 CDC42SE1Q9NRR8 79 aa11.25□□□□□ -0.61
SNAPC3-202ENST00000380821 HIVEP3Q5T1R4 2406 aa11.24□□□□□ -0.61
SNAPC3-202ENST00000380821 KRTAP24-1Q3LI83 254 aa11.23□□□□□ -0.61
SNAPC3-202ENST00000380821 LINC00612Q8N6U2 182 aa11.23□□□□□ -0.61
SNAPC3-202ENST00000380821 LINC01554Q52M75 96 aa11.22□□□□□ -0.61
SNAPC3-202ENST00000380821 C2CD3Q4AC94 2353 aa11.22□□□□□ -0.61
SNAPC3-202ENST00000380821 CRIPTQ9P021 101 aa11.21□□□□□ -0.62
SNAPC3-202ENST00000380821 OBSCN-AS1Q96MR7 158 aa11.2□□□□□ -0.62
SNAPC3-202ENST00000380821 Q5XG85 94 aa11.18□□□□□ -0.62
SNAPC3-202ENST00000380821 PTPN13Q12923 2485 aa11.17□□□□□ -0.62
SNAPC3-202ENST00000380821 ZNF861PO60384 105 aa11.17□□□□□ -0.62
SNAPC3-202ENST00000380821 GIG44P09565 113 aaPredicted RBP11.15□□□□□ -0.62
SNAPC3-202ENST00000380821 APLNQ9ULZ1 77 aa11.15□□□□□ -0.63
SNAPC3-202ENST00000380821 C19orf73Q9NVV2 129 aa11.13□□□□□ -0.63
SNAPC3-202ENST00000380821 Q1T7F1 81 aa11.12□□□□□ -0.63
SNAPC3-202ENST00000380821 A0A1W2PNM2 257 aa11.11□□□□□ -0.63
SNAPC3-202ENST00000380821 BDP1A6H8Y1 2624 aa11.11□□□□□ -0.63
SNAPC3-202ENST00000380821 TTC28Q96AY4 2481 aa11.1□□□□□ -0.63
SNAPC3-202ENST00000380821 LINC00304Q8N9R0 145 aa11.1□□□□□ -0.63
SNAPC3-202ENST00000380821 A0A0G2JQZ4 141 aa11.09□□□□□ -0.63
SNAPC3-202ENST00000380821 A0A1W2PNN7 141 aa11.09□□□□□ -0.63
SNAPC3-202ENST00000380821 IGLV5-48A0A075B6I7 105 aa11.07□□□□□ -0.64
SNAPC3-202ENST00000380821 KRTAP10-11P60412 298 aa11.07□□□□□ -0.64
SNAPC3-202ENST00000380821 IGLV5-37A0A075B6J1 123 aa11.07□□□□□ -0.64
SNAPC3-202ENST00000380821 SONP18583 2426 aaKnown RBP11.06□□□□□ -0.64
SNAPC3-202ENST00000380821 FAM104AQ969W3 186 aa11.05□□□□□ -0.64
SNAPC3-202ENST00000380821 SPRR4Q96PI1 79 aa11.04□□□□□ -0.64
SNAPC3-202ENST00000380821 C9orf163Q8N9P6 203 aa11.04□□□□□ -0.64
SNAPC3-202ENST00000380821 OCR1Q9BZK8 76 aa11.04□□□□□ -0.64
SNAPC3-202ENST00000380821 WWC2-AS2Q96NR7 200 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms