RNA–Protein interactions for RNA: ENST00000380142.4

CDKN2B-202, Transcript of cyclin dependent kinase inhibitor 2B, humanhuman

TSL 1 (best) BASIC

Gene CDKN2B, Length 859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2B-202ENST00000380142 PFN2P35080 140 aa12.91□□□□□ -0.34
CDKN2B-202ENST00000380142 C18orf32Q8TCD1 76 aa12.91□□□□□ -0.34
CDKN2B-202ENST00000380142 SND1-IT1Q9HBX3 110 aa12.91□□□□□ -0.34
CDKN2B-202ENST00000380142 ASB16-AS1Q495Z4 193 aa12.9□□□□□ -0.34
CDKN2B-202ENST00000380142 LINC01546A6NGU7 62 aa12.89□□□□□ -0.35
CDKN2B-202ENST00000380142 ATP5LO75964 103 aa12.88□□□□□ -0.35
CDKN2B-202ENST00000380142 FP248Q71RG6 208 aaPredicted RBP12.88□□□□□ -0.35
CDKN2B-202ENST00000380142 PMVKQ15126 192 aa12.87□□□□□ -0.35
CDKN2B-202ENST00000380142 URB1-AS1Q96HZ7 61 aa12.87□□□□□ -0.35
CDKN2B-202ENST00000380142 IGLV5-39A0A0G2JS06 123 aa12.86□□□□□ -0.35
CDKN2B-202ENST00000380142 SPAG11AQ6PDA7 123 aa12.86□□□□□ -0.35
CDKN2B-202ENST00000380142 SPRR4Q96PI1 79 aa12.86□□□□□ -0.35
CDKN2B-202ENST00000380142 HIGD2AQ9BW72 106 aa12.86□□□□□ -0.35
CDKN2B-202ENST00000380142 H3BRM9 83 aa12.85□□□□□ -0.35
CDKN2B-202ENST00000380142 ERG28Q9UKR5 140 aa12.85□□□□□ -0.35
CDKN2B-202ENST00000380142 FSIP2Q5CZC0 6907 aa12.85□□□□□ -0.35
CDKN2B-202ENST00000380142 LINC01547P58512 204 aaPredicted RBP12.84□□□□□ -0.35
CDKN2B-202ENST00000380142 PMCHL1Q16048 86 aa12.84□□□□□ -0.35
CDKN2B-202ENST00000380142 CRCT1Q9UGL9 99 aa12.84□□□□□ -0.35
CDKN2B-202ENST00000380142 TRGC2P03986 189 aa12.83□□□□□ -0.36
CDKN2B-202ENST00000380142 LINC00614P0C842 121 aa12.83□□□□□ -0.36
CDKN2B-202ENST00000380142 DAND5Q8N907 189 aa12.83□□□□□ -0.36
CDKN2B-202ENST00000380142 A0A096LNJ9 63 aa12.81□□□□□ -0.36
CDKN2B-202ENST00000380142 COLCA2A8K830 154 aa12.81□□□□□ -0.36
CDKN2B-202ENST00000380142 IGLC3P0DOY3 106 aa12.81□□□□□ -0.36
CDKN2B-202ENST00000380142 LINC00337Q8N6G1 96 aa12.81□□□□□ -0.36
CDKN2B-202ENST00000380142 ZNF625Q96I27 306 aaPredicted RBP12.81□□□□□ -0.36
CDKN2B-202ENST00000380142 RPL24P83731 157 aaKnown RBP12.8□□□□□ -0.36
CDKN2B-202ENST00000380142 Q8NBF4 154 aa12.8□□□□□ -0.36
CDKN2B-202ENST00000380142 ZNF22P17026 224 aaPredicted RBP12.79□□□□□ -0.36
CDKN2B-202ENST00000380142 HBDP02042 147 aa12.78□□□□□ -0.36
CDKN2B-202ENST00000380142 COX17Q14061 63 aa12.77□□□□□ -0.37
CDKN2B-202ENST00000380142 NDUFA6P56556 154 aa12.76□□□□□ -0.37
CDKN2B-202ENST00000380142 C4orf48Q5BLP8 95 aa12.75□□□□□ -0.37
CDKN2B-202ENST00000380142 LCE2CQ5TA81 110 aa12.75□□□□□ -0.37
CDKN2B-202ENST00000380142 BAGE3Q86Y29 109 aa12.75□□□□□ -0.37
CDKN2B-202ENST00000380142 CHCHD1Q96BP2 118 aaKnown RBP12.74□□□□□ -0.37
CDKN2B-202ENST00000380142 SEC61BP60468 96 aaKnown RBP12.72□□□□□ -0.37
CDKN2B-202ENST00000380142 HSBP1O75506 76 aa12.7□□□□□ -0.38
CDKN2B-202ENST00000380142 FAM19A2Q8N3H0 131 aa12.7□□□□□ -0.38
CDKN2B-202ENST00000380142 SERF1AO75920 110 aa12.69□□□□□ -0.38
CDKN2B-202ENST00000380142 SPINK1P00995 79 aa12.69□□□□□ -0.38
CDKN2B-202ENST00000380142 SPRR1AP35321 89 aa12.69□□□□□ -0.38
CDKN2B-202ENST00000380142 SMCR5Q8TEV8 140 aa12.69□□□□□ -0.38
CDKN2B-202ENST00000380142 ZNF706Q9Y5V0 76 aaPredicted RBP12.69□□□□□ -0.38
CDKN2B-202ENST00000380142 C11orf86A6NJI1 115 aa12.68□□□□□ -0.38
CDKN2B-202ENST00000380142 KRTAP4-16G5E9R7 235 aaPredicted RBP12.68□□□□□ -0.38
CDKN2B-202ENST00000380142 LINC00310P59036 64 aa12.68□□□□□ -0.38
CDKN2B-202ENST00000380142 KRTAP19-2Q3LHN2 52 aa12.68□□□□□ -0.38
CDKN2B-202ENST00000380142 SFTA2Q6UW10 78 aa12.68□□□□□ -0.38
CDKN2B-202ENST00000380142 LINC00483Q53H64 154 aa12.66□□□□□ -0.38
CDKN2B-202ENST00000380142 Q8N377 158 aa12.66□□□□□ -0.38
CDKN2B-202ENST00000380142 A0A0U1RRA0 63 aa12.65□□□□□ -0.38
CDKN2B-202ENST00000380142 PRYO14603 147 aa12.65□□□□□ -0.38
CDKN2B-202ENST00000380142 TMEM170BQ5T4T1 132 aa12.65□□□□□ -0.38
CDKN2B-202ENST00000380142 ATP6V1G1O75348 118 aa12.64□□□□□ -0.39
CDKN2B-202ENST00000380142 LINC00158P58513 81 aa12.64□□□□□ -0.39
CDKN2B-202ENST00000380142 XP32Q5T750 250 aa12.64□□□□□ -0.39
CDKN2B-202ENST00000380142 IFI27L1Q96BM0 104 aa12.64□□□□□ -0.39
CDKN2B-202ENST00000380142 KCNQ1DNQ9H478 68 aa12.62□□□□□ -0.39
CDKN2B-202ENST00000380142 NCR3O14931 201 aa12.61□□□□□ -0.39
CDKN2B-202ENST00000380142 HIST1H2BKO60814 126 aa12.6□□□□□ -0.39
CDKN2B-202ENST00000380142 ERC2-IT1O76042 136 aa12.6□□□□□ -0.39
CDKN2B-202ENST00000380142 HIST1H2BJP06899 126 aa12.6□□□□□ -0.39
CDKN2B-202ENST00000380142 HIST1H2BOP23527 126 aa12.6□□□□□ -0.39
CDKN2B-202ENST00000380142 HIST1H2BBP33778 126 aa12.6□□□□□ -0.39
CDKN2B-202ENST00000380142 HIST1H2BDP58876 126 aa12.6□□□□□ -0.39
CDKN2B-202ENST00000380142 HIST1H2BCP62807 126 aa12.6□□□□□ -0.39
CDKN2B-202ENST00000380142 HIST2H2BEQ16778 126 aa12.6□□□□□ -0.39
CDKN2B-202ENST00000380142 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.6□□□□□ -0.39
CDKN2B-202ENST00000380142 HIST1H2BHQ93079 126 aa12.6□□□□□ -0.39
CDKN2B-202ENST00000380142 HIST1H2BNQ99877 126 aa12.6□□□□□ -0.39
CDKN2B-202ENST00000380142 HIST1H2BMQ99879 126 aa12.6□□□□□ -0.39
CDKN2B-202ENST00000380142 CHTOPQ9Y3Y2 248 aaKnown RBP12.6□□□□□ -0.39
CDKN2B-202ENST00000380142 H0Y8G0 127 aa12.59□□□□□ -0.39
CDKN2B-202ENST00000380142 S100A1P23297 94 aa12.59□□□□□ -0.39
CDKN2B-202ENST00000380142 RPS29P62273 56 aaKnown RBP12.59□□□□□ -0.39
CDKN2B-202ENST00000380142 MOBPQ13875 183 aa12.59□□□□□ -0.39
CDKN2B-202ENST00000380142 GAGE2AQ6NT46 116 aa12.59□□□□□ -0.39
CDKN2B-202ENST00000380142 SMIM13P0DJ93 91 aa12.58□□□□□ -0.4
CDKN2B-202ENST00000380142 FABP4P15090 132 aa12.58□□□□□ -0.4
CDKN2B-202ENST00000380142 MT1HP80294 61 aa12.58□□□□□ -0.4
CDKN2B-202ENST00000380142 LEPROTL1O95214 131 aa12.57□□□□□ -0.4
CDKN2B-202ENST00000380142 BOD1L2Q8IYS8 172 aa12.57□□□□□ -0.4
CDKN2B-202ENST00000380142 IGLV9-49A0A0B4J1Y8 123 aa12.56□□□□□ -0.4
CDKN2B-202ENST00000380142 TRAV12-1A0A0B4J245 112 aa12.56□□□□□ -0.4
CDKN2B-202ENST00000380142 TRBV10-3A0A0K0K1G6 114 aa12.56□□□□□ -0.4
CDKN2B-202ENST00000380142 ETDCA0A1B0GVM5 59 aa12.55□□□□□ -0.4
CDKN2B-202ENST00000380142 TMEM223A0PJW6 202 aa12.54□□□□□ -0.4
CDKN2B-202ENST00000380142 B5MCH6 92 aa12.54□□□□□ -0.4
CDKN2B-202ENST00000380142 SSBP3-AS1Q7Z2R9 100 aa12.54□□□□□ -0.4
CDKN2B-202ENST00000380142 NDUFA12Q9UI09 145 aa12.54□□□□□ -0.4
CDKN2B-202ENST00000380142 MIR7-3HGQ8N6C7 128 aa12.53□□□□□ -0.4
CDKN2B-202ENST00000380142 HSPB8Q9UJY1 196 aa12.53□□□□□ -0.4
CDKN2B-202ENST00000380142 SLC25A20O43772 301 aa12.52□□□□□ -0.41
CDKN2B-202ENST00000380142 Q9BRP9 147 aa12.51□□□□□ -0.41
CDKN2B-202ENST00000380142 MEIG1Q5JSS6 88 aa12.5□□□□□ -0.41
CDKN2B-202ENST00000380142 PMCHL2Q9BQD1 86 aa12.48□□□□□ -0.41
CDKN2B-202ENST00000380142 HERV-K104P63124 156 aa12.46□□□□□ -0.41
CDKN2B-202ENST00000380142 LINC00587B1AMM8 73 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms