RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 TRAV13-2A0A0B4J235 113 aa15.92■□□□□ 0.14
ECHDC3-201ENST00000379215 GAGE2EQ4V326 116 aa15.91■□□□□ 0.14
ECHDC3-201ENST00000379215 GAGE2DQ9UEU5 116 aa15.91■□□□□ 0.14
ECHDC3-201ENST00000379215 XAGE1AQ9HD64 81 aa15.9■□□□□ 0.14
ECHDC3-201ENST00000379215 C9orf118A6NHY6 69 aa15.89■□□□□ 0.13
ECHDC3-201ENST00000379215 PGPEP1Q9NXJ5 209 aa15.89■□□□□ 0.13
ECHDC3-201ENST00000379215 C9orf163Q8N9P6 203 aa15.87■□□□□ 0.13
ECHDC3-201ENST00000379215 IGKV2-28A0A075B6P5 120 aa15.86■□□□□ 0.13
ECHDC3-201ENST00000379215 IGKV2D-28P01615 120 aa15.86■□□□□ 0.13
ECHDC3-201ENST00000379215 TRBV10-2A0A0K0K1G8 114 aa15.85■□□□□ 0.13
ECHDC3-201ENST00000379215 RPL13AP40429 203 aaKnown RBP15.85■□□□□ 0.13
ECHDC3-201ENST00000379215 GAGE2BQ13066 116 aa15.84■□□□□ 0.13
ECHDC3-201ENST00000379215 Q1RN00 199 aa15.84■□□□□ 0.13
ECHDC3-201ENST00000379215 C16orf90A8MZG2 172 aa15.83■□□□□ 0.13
ECHDC3-201ENST00000379215 TSPAN13O95857 204 aa15.83■□□□□ 0.13
ECHDC3-201ENST00000379215 PLA2G2DQ9UNK4 145 aa15.83■□□□□ 0.13
ECHDC3-201ENST00000379215 H3BUT2 72 aa15.83■□□□□ 0.12
ECHDC3-201ENST00000379215 RTL8CO15255 209 aa15.83■□□□□ 0.12
ECHDC3-201ENST00000379215 C9orf129Q5T035 196 aaKnown RBP15.83■□□□□ 0.12
ECHDC3-201ENST00000379215 LINC00337Q8N6G1 96 aa15.83■□□□□ 0.12
ECHDC3-201ENST00000379215 DNAH2Q9P225 4427 aa15.82■□□□□ 0.12
ECHDC3-201ENST00000379215 H7C2G1 150 aa15.79■□□□□ 0.12
ECHDC3-201ENST00000379215 VPREB1P12018 145 aa15.79■□□□□ 0.12
ECHDC3-201ENST00000379215 TNP2Q05952 138 aa15.79■□□□□ 0.12
ECHDC3-201ENST00000379215 LYRM7Q5U5X0 104 aa15.79■□□□□ 0.12
ECHDC3-201ENST00000379215 OR13C6PQ8NH95 151 aa15.79■□□□□ 0.12
ECHDC3-201ENST00000379215 TMEM126AQ9H061 195 aa15.79■□□□□ 0.12
ECHDC3-201ENST00000379215 LINC00474Q9P2X8 69 aa15.79■□□□□ 0.12
ECHDC3-201ENST00000379215 NCR3O14931 201 aa15.78■□□□□ 0.12
ECHDC3-201ENST00000379215 Q8NDZ9 215 aa15.78■□□□□ 0.12
ECHDC3-201ENST00000379215 A0A1W2PPM0 123 aa15.77■□□□□ 0.12
ECHDC3-201ENST00000379215 FABP2P12104 132 aa15.77■□□□□ 0.12
ECHDC3-201ENST00000379215 S100A7L2Q5SY68 101 aa15.77■□□□□ 0.12
ECHDC3-201ENST00000379215 PSMB2P49721 201 aa15.76■□□□□ 0.11
ECHDC3-201ENST00000379215 A0A096LNI7 61 aa15.76■□□□□ 0.11
ECHDC3-201ENST00000379215 M0R378 163 aa15.76■□□□□ 0.11
ECHDC3-201ENST00000379215 PRR3P79522 188 aaKnown RBP15.76■□□□□ 0.11
ECHDC3-201ENST00000379215 NKAPP1Q8N9T2 125 aa15.76■□□□□ 0.11
ECHDC3-201ENST00000379215 IGLV5-52A0A0A0MRZ9 124 aa15.75■□□□□ 0.11
ECHDC3-201ENST00000379215 A0A1B0GV90 55 aa15.75■□□□□ 0.11
ECHDC3-201ENST00000379215 NAA38Q9BRA0 125 aaKnown RBP15.75■□□□□ 0.11
ECHDC3-201ENST00000379215 CBY1Q9Y3M2 126 aa15.75■□□□□ 0.11
ECHDC3-201ENST00000379215 IGLV5-37A0A075B6J1 123 aa15.74■□□□□ 0.11
ECHDC3-201ENST00000379215 SDIM1Q6ZPB5 146 aa15.74■□□□□ 0.11
ECHDC3-201ENST00000379215 COX6CP09669 75 aa15.73■□□□□ 0.11
ECHDC3-201ENST00000379215 DNAH17Q9UFH2 4485 aa15.72■□□□□ 0.11
ECHDC3-201ENST00000379215 IGKV2-24A0A0C4DH68 120 aa15.72■□□□□ 0.11
ECHDC3-201ENST00000379215 VAMP3Q15836 100 aa15.72■□□□□ 0.11
ECHDC3-201ENST00000379215 IGLV6-57P01721 117 aa15.71■□□□□ 0.11
ECHDC3-201ENST00000379215 RPL28P46779 137 aaKnown RBP15.71■□□□□ 0.11
ECHDC3-201ENST00000379215 LINC00336Q6ZUF6 198 aa15.71■□□□□ 0.11
ECHDC3-201ENST00000379215 SACSQ9NZJ4 4579 aa15.7■□□□□ 0.1
ECHDC3-201ENST00000379215 SERTAD4-AS1Q5TG53 156 aa15.7■□□□□ 0.1
ECHDC3-201ENST00000379215 SCGB1C2P0DMR2 95 aa15.69■□□□□ 0.1
ECHDC3-201ENST00000379215 TRIAP1O43715 76 aa15.68■□□□□ 0.1
ECHDC3-201ENST00000379215 SMIM11BQ8TCY0 68 aa15.68■□□□□ 0.1
ECHDC3-201ENST00000379215 GTF2H5Q6ZYL4 71 aa15.66■□□□□ 0.1
ECHDC3-201ENST00000379215 SPCS1Q9Y6A9 102 aa15.66■□□□□ 0.1
ECHDC3-201ENST00000379215 HYDINQ4G0P3 5121 aa15.66■□□□□ 0.1
ECHDC3-201ENST00000379215 FAM168BA1KXE4 195 aa15.65■□□□□ 0.1
ECHDC3-201ENST00000379215 LINC01620Q4KN68 170 aa15.65■□□□□ 0.1
ECHDC3-201ENST00000379215 FAM19A5Q7Z5A7 132 aaPredicted RBP15.65■□□□□ 0.1
ECHDC3-201ENST00000379215 TRBV20-1A0A075B6N2 111 aa15.65■□□□□ 0.1
ECHDC3-201ENST00000379215 TRBV10-3A0A0K0K1G6 114 aa15.65■□□□□ 0.1
ECHDC3-201ENST00000379215 C22orf24Q9Y442 160 aa15.64■□□□□ 0.09
ECHDC3-201ENST00000379215 FRAS1Q86XX4 4008 aa15.64■□□□□ 0.09
ECHDC3-201ENST00000379215 TRAV23DV6A0A075B6W5 121 aa15.62■□□□□ 0.09
ECHDC3-201ENST00000379215 GAGE10A6NGK3 116 aa15.62■□□□□ 0.09
ECHDC3-201ENST00000379215 K7EP34 96 aa15.62■□□□□ 0.09
ECHDC3-201ENST00000379215 CHTF8P0CG12 524 aa15.62■□□□□ 0.09
ECHDC3-201ENST00000379215 MRPL55Q7Z7F7 128 aaKnown RBP15.62■□□□□ 0.09
ECHDC3-201ENST00000379215 C7orf33Q8WU49 177 aa15.62■□□□□ 0.09
ECHDC3-201ENST00000379215 SPACA4Q8TDM5 124 aa15.61■□□□□ 0.09
ECHDC3-201ENST00000379215 H0YGX0 51 aa15.6■□□□□ 0.09
ECHDC3-201ENST00000379215 M0QXV9 152 aa15.6■□□□□ 0.09
ECHDC3-201ENST00000379215 KRTAP7-1Q8IUC3 87 aa15.6■□□□□ 0.09
ECHDC3-201ENST00000379215 A0A1W2PNN7 141 aa15.58■□□□□ 0.09
ECHDC3-201ENST00000379215 KRTAP10-2P60368 255 aa15.57■□□□□ 0.08
ECHDC3-201ENST00000379215 DPH3Q96FX2 82 aa15.57■□□□□ 0.08
ECHDC3-201ENST00000379215 FUSP35637 526 aaKnown RBP eCLIP15.57■□□□□ 0.08
ECHDC3-201ENST00000379215 ATXN8Q156A1 80 aa15.56■□□□□ 0.08
ECHDC3-201ENST00000379215 DIRC1Q969H9 104 aa15.56■□□□□ 0.08
ECHDC3-201ENST00000379215 LINC00167Q96N53 147 aa15.56■□□□□ 0.08
ECHDC3-201ENST00000379215 KCNQ1DNQ9H478 68 aa15.56■□□□□ 0.08
ECHDC3-201ENST00000379215 ZNF73O43830 326 aaPredicted RBP15.55■□□□□ 0.08
ECHDC3-201ENST00000379215 UBE2V1Q13404 147 aa15.55■□□□□ 0.08
ECHDC3-201ENST00000379215 C6orf99Q4VX62 202 aa15.55■□□□□ 0.08
ECHDC3-201ENST00000379215 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.55■□□□□ 0.08
ECHDC3-201ENST00000379215 HECTD4Q9Y4D8 3996 aa15.55■□□□□ 0.08
ECHDC3-201ENST00000379215 IGLV1-50A0A075B6I6 118 aa15.54■□□□□ 0.08
ECHDC3-201ENST00000379215 PRYO14603 147 aa15.54■□□□□ 0.08
ECHDC3-201ENST00000379215 TCL1BO95988 128 aa15.54■□□□□ 0.08
ECHDC3-201ENST00000379215 TRBV7-6A0A0J9YX20 115 aa15.54■□□□□ 0.08
ECHDC3-201ENST00000379215 EPM2AB3EWF7 344 aa15.52■□□□□ 0.08
ECHDC3-201ENST00000379215 PANO1I0J062 215 aa15.51■□□□□ 0.07
ECHDC3-201ENST00000379215 LST1O00453 97 aa15.51■□□□□ 0.07
ECHDC3-201ENST00000379215 FAT2Q9NYQ8 4349 aa15.5■□□□□ 0.07
ECHDC3-201ENST00000379215 CLEC2BQ92478 149 aa15.5■□□□□ 0.07
ECHDC3-201ENST00000379215 RPL37AP8A6NKH3 93 aa15.49■□□□□ 0.07
ECHDC3-201ENST00000379215 SNCGO76070 127 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms