RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 CR1P17927 2039 aa9.89□□□□□ -0.83
SHROOM1-203ENST00000378679 UBE2AP49459 152 aa9.89□□□□□ -0.83
SHROOM1-203ENST00000378679 IGHV3OR16-9A0A0B4J2B5 98 aa9.88□□□□□ -0.83
SHROOM1-203ENST00000378679 ENHOQ6UWT2 76 aa9.88□□□□□ -0.83
SHROOM1-203ENST00000378679 FAM19A5Q7Z5A7 132 aaPredicted RBP9.88□□□□□ -0.83
SHROOM1-203ENST00000378679 Q8NAQ8 132 aa9.88□□□□□ -0.83
SHROOM1-203ENST00000378679 SMIM11BQ8TCY0 68 aa9.88□□□□□ -0.83
SHROOM1-203ENST00000378679 HIGD2AQ9BW72 106 aa9.88□□□□□ -0.83
SHROOM1-203ENST00000378679 SBSPONQ8IVN8 264 aa9.88□□□□□ -0.83
SHROOM1-203ENST00000378679 CSNK1G2-AS1Q8NCQ2 148 aa9.88□□□□□ -0.83
SHROOM1-203ENST00000378679 GIG44P09565 113 aaPredicted RBP9.87□□□□□ -0.83
SHROOM1-203ENST00000378679 COX17Q14061 63 aa9.87□□□□□ -0.83
SHROOM1-203ENST00000378679 IGKV2-28A0A075B6P5 120 aa9.87□□□□□ -0.83
SHROOM1-203ENST00000378679 CDK2AP2O75956 126 aa9.87□□□□□ -0.83
SHROOM1-203ENST00000378679 IGKV2D-28P01615 120 aa9.87□□□□□ -0.83
SHROOM1-203ENST00000378679 FUSP35637 526 aaKnown RBP eCLIP9.86□□□□□ -0.83
SHROOM1-203ENST00000378679 C6orf223Q8N319 242 aa9.86□□□□□ -0.83
SHROOM1-203ENST00000378679 PRR3P79522 188 aaKnown RBP9.86□□□□□ -0.83
SHROOM1-203ENST00000378679 USP17L23D6RBM5 183 aa9.85□□□□□ -0.83
SHROOM1-203ENST00000378679 IGLV5-39A0A0G2JS06 123 aa9.84□□□□□ -0.83
SHROOM1-203ENST00000378679 HRCT1Q6UXD1 115 aa9.84□□□□□ -0.83
SHROOM1-203ENST00000378679 A0A0U1RQV1 116 aa9.84□□□□□ -0.83
SHROOM1-203ENST00000378679 EGFEM1PQ0D2K5 195 aa9.84□□□□□ -0.83
SHROOM1-203ENST00000378679 SNURFQ9Y675 71 aa9.84□□□□□ -0.83
SHROOM1-203ENST00000378679 ESRGQ1W209 222 aa9.83□□□□□ -0.84
SHROOM1-203ENST00000378679 APCP25054 2843 aa9.83□□□□□ -0.84
SHROOM1-203ENST00000378679 H3BQ85 93 aa9.82□□□□□ -0.84
SHROOM1-203ENST00000378679 LY6G6CO95867 125 aa9.82□□□□□ -0.84
SHROOM1-203ENST00000378679 COX7CP15954 63 aa9.82□□□□□ -0.84
SHROOM1-203ENST00000378679 UPK3BQ9BT76 320 aa9.82□□□□□ -0.84
SHROOM1-203ENST00000378679 M0R378 163 aa9.82□□□□□ -0.84
SHROOM1-203ENST00000378679 Q6ZQY7 126 aa9.82□□□□□ -0.84
SHROOM1-203ENST00000378679 Q8N3U1 123 aa9.81□□□□□ -0.84
SHROOM1-203ENST00000378679 MPLKIPQ8TAP9 179 aa9.81□□□□□ -0.84
SHROOM1-203ENST00000378679 BRK1Q8WUW1 75 aa9.81□□□□□ -0.84
SHROOM1-203ENST00000378679 NUPR2A6NF83 97 aa9.81□□□□□ -0.84
SHROOM1-203ENST00000378679 MUC7Q8TAX7 377 aa9.8□□□□□ -0.84
SHROOM1-203ENST00000378679 FAM19A1Q7Z5A9 133 aa9.8□□□□□ -0.84
SHROOM1-203ENST00000378679 ZNF575Q86XF7 245 aa9.8□□□□□ -0.84
SHROOM1-203ENST00000378679 CSMD2Q7Z408 3487 aa9.8□□□□□ -0.84
SHROOM1-203ENST00000378679 RPL37AP8A6NKH3 93 aa9.79□□□□□ -0.84
SHROOM1-203ENST00000378679 IGLV5-45A0A087WSX0 123 aa9.79□□□□□ -0.84
SHROOM1-203ENST00000378679 MXRA5Q9NR99 2828 aa9.79□□□□□ -0.84
SHROOM1-203ENST00000378679 NREPQ16612 68 aa9.79□□□□□ -0.84
SHROOM1-203ENST00000378679 Q6Q795 121 aa9.78□□□□□ -0.84
SHROOM1-203ENST00000378679 A0A087WYN8 130 aa9.78□□□□□ -0.84
SHROOM1-203ENST00000378679 NSD1Q96L73 2696 aaPredicted RBP9.78□□□□□ -0.84
SHROOM1-203ENST00000378679 PLAC8L1A1L4L8 177 aa9.77□□□□□ -0.85
SHROOM1-203ENST00000378679 ZNF73O43830 326 aaPredicted RBP9.77□□□□□ -0.85
SHROOM1-203ENST00000378679 A0A096LNI7 61 aa9.77□□□□□ -0.85
SHROOM1-203ENST00000378679 SERP2Q8N6R1 65 aa9.77□□□□□ -0.85
SHROOM1-203ENST00000378679 HIVEP1P15822 2718 aa9.77□□□□□ -0.85
SHROOM1-203ENST00000378679 TRBV10-3A0A0K0K1G6 114 aa9.76□□□□□ -0.85
SHROOM1-203ENST00000378679 KRTAP10-11P60412 298 aa9.76□□□□□ -0.85
SHROOM1-203ENST00000378679 EIF4EBP3O60516 100 aaPredicted RBP9.76□□□□□ -0.85
SHROOM1-203ENST00000378679 SPATA3Q8NHX4 192 aa9.76□□□□□ -0.85
SHROOM1-203ENST00000378679 BSNQ9UPA5 3926 aa9.76□□□□□ -0.85
SHROOM1-203ENST00000378679 RPL28P46779 137 aaKnown RBP9.76□□□□□ -0.85
SHROOM1-203ENST00000378679 PDE6GP18545 87 aa9.75□□□□□ -0.85
SHROOM1-203ENST00000378679 LINC01561Q8N1V8 128 aa9.75□□□□□ -0.85
SHROOM1-203ENST00000378679 NDUFC2-KCTD14E9PQ53 114 aa9.75□□□□□ -0.85
SHROOM1-203ENST00000378679 NHLRC4P0CG21 123 aaPredicted RBP9.75□□□□□ -0.85
SHROOM1-203ENST00000378679 LINC01556Q5JQF7 62 aa9.75□□□□□ -0.85
SHROOM1-203ENST00000378679 Q6ZRU5 148 aa9.75□□□□□ -0.85
SHROOM1-203ENST00000378679 H3BNG1 76 aa9.74□□□□□ -0.85
SHROOM1-203ENST00000378679 LINC00337Q8N6G1 96 aa9.74□□□□□ -0.85
SHROOM1-203ENST00000378679 FAM236DA0A1B0GTK5 79 aa9.74□□□□□ -0.85
SHROOM1-203ENST00000378679 FAM236CP0DP71 79 aa9.74□□□□□ -0.85
SHROOM1-203ENST00000378679 B9D2Q9BPU9 175 aa9.73□□□□□ -0.85
SHROOM1-203ENST00000378679 IMUPQ9GZP8 106 aa9.73□□□□□ -0.85
SHROOM1-203ENST00000378679 FAM240AA0A1B0GVK7 77 aa9.73□□□□□ -0.85
SHROOM1-203ENST00000378679 LINC00846Q9NV44 126 aa9.73□□□□□ -0.85
SHROOM1-203ENST00000378679 NIPBLQ6KC79 2804 aaeCLIP9.72□□□□□ -0.85
SHROOM1-203ENST00000378679 C2orf48Q96LS8 159 aa9.72□□□□□ -0.85
SHROOM1-203ENST00000378679 PRR4Q16378 134 aa9.7□□□□□ -0.86
SHROOM1-203ENST00000378679 FAM218AQ96MZ4 157 aa9.7□□□□□ -0.86
SHROOM1-203ENST00000378679 NDUFC2O95298 119 aa9.7□□□□□ -0.86
SHROOM1-203ENST00000378679 SOSTDC1Q6X4U4 206 aa9.7□□□□□ -0.86
SHROOM1-203ENST00000378679 C10orf25Q5T742 122 aa9.69□□□□□ -0.86
SHROOM1-203ENST00000378679 K7EIL1 84 aa9.69□□□□□ -0.86
SHROOM1-203ENST00000378679 TMEM258P61165 79 aa9.68□□□□□ -0.86
SHROOM1-203ENST00000378679 LRCOL1A6NCL2 159 aa9.67□□□□□ -0.86
SHROOM1-203ENST00000378679 CCKP06307 115 aa9.67□□□□□ -0.86
SHROOM1-203ENST00000378679 C3orf84H3BNL1 204 aa9.67□□□□□ -0.86
SHROOM1-203ENST00000378679 DHRS4-AS1Q9P1J3 65 aa9.66□□□□□ -0.86
SHROOM1-203ENST00000378679 LINC00612Q8N6U2 182 aa9.66□□□□□ -0.86
SHROOM1-203ENST00000378679 Q8N814 137 aa9.66□□□□□ -0.86
SHROOM1-203ENST00000378679 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.65□□□□□ -0.86
SHROOM1-203ENST00000378679 LINC00588Q9Y4M8 146 aa9.65□□□□□ -0.86
SHROOM1-203ENST00000378679 C6orf48Q9UBA6 75 aa9.65□□□□□ -0.86
SHROOM1-203ENST00000378679 VPS13CQ709C8 3753 aa9.65□□□□□ -0.87
SHROOM1-203ENST00000378679 MDFIQ99750 246 aa9.64□□□□□ -0.87
SHROOM1-203ENST00000378679 TRBV7-7A0A0K0K1E9 115 aa9.64□□□□□ -0.87
SHROOM1-203ENST00000378679 LINC00474Q9P2X8 69 aa9.63□□□□□ -0.87
SHROOM1-203ENST00000378679 BPY2O14599 106 aa9.63□□□□□ -0.87
SHROOM1-203ENST00000378679 SMCR5Q8TEV8 140 aa9.63□□□□□ -0.87
SHROOM1-203ENST00000378679 F8WDY8 70 aa9.63□□□□□ -0.87
SHROOM1-203ENST00000378679 C4orf26Q17RF5 130 aa9.62□□□□□ -0.87
SHROOM1-203ENST00000378679 NDUFB1O75438 58 aa9.61□□□□□ -0.87
SHROOM1-203ENST00000378679 Q6JHZ5 121 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms