RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 LINC00612Q8N6U2 182 aa11.41□□□□□ -0.58
PCDHA1-201ENST00000378133 NDUFC2-KCTD14E9PQ53 114 aa11.4□□□□□ -0.58
PCDHA1-201ENST00000378133 X6R8D5 127 aa11.4□□□□□ -0.58
PCDHA1-201ENST00000378133 HIVEP2P31629 2446 aa11.4□□□□□ -0.58
PCDHA1-201ENST00000378133 A0A1B0GUV1 79 aa11.4□□□□□ -0.58
PCDHA1-201ENST00000378133 Q8IZM0 81 aa11.4□□□□□ -0.58
PCDHA1-201ENST00000378133 TRBV10-3A0A0K0K1G6 114 aa11.39□□□□□ -0.59
PCDHA1-201ENST00000378133 PRO0255Q9UI72 69 aa11.39□□□□□ -0.59
PCDHA1-201ENST00000378133 VWFP04275 2813 aa11.38□□□□□ -0.59
PCDHA1-201ENST00000378133 V9GYY9 64 aa11.37□□□□□ -0.59
PCDHA1-201ENST00000378133 A0A0U1RQV1 116 aa11.37□□□□□ -0.59
PCDHA1-201ENST00000378133 DEFB4AO15263 64 aa11.37□□□□□ -0.59
PCDHA1-201ENST00000378133 LINC00482Q8N8I6 264 aa11.37□□□□□ -0.59
PCDHA1-201ENST00000378133 C6orf99Q4VX62 202 aa11.36□□□□□ -0.59
PCDHA1-201ENST00000378133 LINC00269Q8N2A0 174 aa11.36□□□□□ -0.59
PCDHA1-201ENST00000378133 Q8N3U1 123 aa11.35□□□□□ -0.59
PCDHA1-201ENST00000378133 SPATA3Q8NHX4 192 aa11.35□□□□□ -0.59
PCDHA1-201ENST00000378133 IGLV10-54A0A075B6I4 117 aa11.34□□□□□ -0.59
PCDHA1-201ENST00000378133 INAFM1C9JVW0 142 aa11.34□□□□□ -0.59
PCDHA1-201ENST00000378133 RBM3P98179 157 aaKnown RBP11.34□□□□□ -0.59
PCDHA1-201ENST00000378133 EPM2AB3EWF7 344 aa11.34□□□□□ -0.59
PCDHA1-201ENST00000378133 HIVEP1P15822 2718 aa11.33□□□□□ -0.6
PCDHA1-201ENST00000378133 Q6ZQT0 140 aa11.32□□□□□ -0.6
PCDHA1-201ENST00000378133 FP248Q71RG6 208 aaPredicted RBP11.32□□□□□ -0.6
PCDHA1-201ENST00000378133 COX17Q14061 63 aa11.32□□□□□ -0.6
PCDHA1-201ENST00000378133 KIAA0087Q14695 138 aa11.31□□□□□ -0.6
PCDHA1-201ENST00000378133 DEFB135Q30KP9 77 aa11.31□□□□□ -0.6
PCDHA1-201ENST00000378133 C1orf195Q5TG92 126 aa11.31□□□□□ -0.6
PCDHA1-201ENST00000378133 LINC00575Q6W349 94 aa11.31□□□□□ -0.6
PCDHA1-201ENST00000378133 LAMTOR3Q9UHA4 124 aa11.31□□□□□ -0.6
PCDHA1-201ENST00000378133 ANGP03950 147 aaKnown RBP11.31□□□□□ -0.6
PCDHA1-201ENST00000378133 C9orf116Q5BN46 136 aaPredicted RBP11.31□□□□□ -0.6
PCDHA1-201ENST00000378133 TRAV7A0A075B6U4 112 aa11.3□□□□□ -0.6
PCDHA1-201ENST00000378133 CD164L2Q6UWJ8 174 aa11.3□□□□□ -0.6
PCDHA1-201ENST00000378133 CHCHD10Q8WYQ3 142 aaPredicted RBP11.3□□□□□ -0.6
PCDHA1-201ENST00000378133 SERP1Q9Y6X1 66 aa11.3□□□□□ -0.6
PCDHA1-201ENST00000378133 HAMPP81172 84 aa11.3□□□□□ -0.6
PCDHA1-201ENST00000378133 H7BZZ5 65 aa11.29□□□□□ -0.6
PCDHA1-201ENST00000378133 LINC01547P58512 204 aaPredicted RBP11.29□□□□□ -0.6
PCDHA1-201ENST00000378133 BRK1Q8WUW1 75 aa11.29□□□□□ -0.6
PCDHA1-201ENST00000378133 LYRM9A8MSI8 78 aa11.29□□□□□ -0.6
PCDHA1-201ENST00000378133 ZNF561-AS1K7EIQ3 104 aa11.29□□□□□ -0.6
PCDHA1-201ENST00000378133 REG3AQ06141 175 aa11.29□□□□□ -0.6
PCDHA1-201ENST00000378133 Q8NDZ9 215 aa11.29□□□□□ -0.6
PCDHA1-201ENST00000378133 M0R2N4 97 aa11.28□□□□□ -0.6
PCDHA1-201ENST00000378133 BCE1O60756 84 aa11.28□□□□□ -0.6
PCDHA1-201ENST00000378133 FLNBO75369 2602 aaKnown RBP11.28□□□□□ -0.6
PCDHA1-201ENST00000378133 LOC110117498A0A087WWA1 95 aa11.28□□□□□ -0.6
PCDHA1-201ENST00000378133 NSD1Q96L73 2696 aaPredicted RBP11.27□□□□□ -0.6
PCDHA1-201ENST00000378133 TRAV10A0A0B4J240 114 aa11.26□□□□□ -0.61
PCDHA1-201ENST00000378133 Q6ZVQ6 151 aa11.26□□□□□ -0.61
PCDHA1-201ENST00000378133 C6orf223Q8N319 242 aa11.26□□□□□ -0.61
PCDHA1-201ENST00000378133 LINC00474Q9P2X8 69 aa11.26□□□□□ -0.61
PCDHA1-201ENST00000378133 IGHV4-28A0A0C4DH34 117 aa11.25□□□□□ -0.61
PCDHA1-201ENST00000378133 DAD1P61803 113 aa11.25□□□□□ -0.61
PCDHA1-201ENST00000378133 CELA1Q9UNI1 258 aa11.24□□□□□ -0.61
PCDHA1-201ENST00000378133 SNURFQ9Y675 71 aa11.24□□□□□ -0.61
PCDHA1-201ENST00000378133 KLKP1Q107X0 134 aa11.23□□□□□ -0.61
PCDHA1-201ENST00000378133 C9orf66Q5T8R8 295 aa11.23□□□□□ -0.61
PCDHA1-201ENST00000378133 TENM1Q9UKZ4 2725 aa11.23□□□□□ -0.61
PCDHA1-201ENST00000378133 SMIM26A0A096LP01 95 aa11.22□□□□□ -0.61
PCDHA1-201ENST00000378133 CYSRT1A8MQ03 144 aa11.22□□□□□ -0.61
PCDHA1-201ENST00000378133 HTN3P15516 51 aa11.22□□□□□ -0.61
PCDHA1-201ENST00000378133 C10orf25Q5T742 122 aa11.22□□□□□ -0.61
PCDHA1-201ENST00000378133 Q6ZQY7 126 aa11.22□□□□□ -0.61
PCDHA1-201ENST00000378133 RMI2Q96E14 147 aa11.22□□□□□ -0.61
PCDHA1-201ENST00000378133 UNQ6190/PRO20217Q6UXQ8 127 aa11.21□□□□□ -0.62
PCDHA1-201ENST00000378133 PDE6GP18545 87 aa11.2□□□□□ -0.62
PCDHA1-201ENST00000378133 APOC4P55056 127 aa11.2□□□□□ -0.62
PCDHA1-201ENST00000378133 CXCL6P80162 114 aa11.2□□□□□ -0.62
PCDHA1-201ENST00000378133 BAHCC1Q9P281 2608 aa11.19□□□□□ -0.62
PCDHA1-201ENST00000378133 F8WEM9 126 aa11.18□□□□□ -0.62
PCDHA1-201ENST00000378133 Q8NAQ8 132 aa11.18□□□□□ -0.62
PCDHA1-201ENST00000378133 SPAG11BQ08648 103 aa11.18□□□□□ -0.62
PCDHA1-201ENST00000378133 TRRAPQ9Y4A5 3859 aa11.17□□□□□ -0.62
PCDHA1-201ENST00000378133 IGLV6-57P01721 117 aa11.17□□□□□ -0.62
PCDHA1-201ENST00000378133 KLK12Q9UKR0 248 aa11.17□□□□□ -0.62
PCDHA1-201ENST00000378133 MUC7Q8TAX7 377 aa11.16□□□□□ -0.62
PCDHA1-201ENST00000378133 ATRQ13535 2644 aa11.16□□□□□ -0.62
PCDHA1-201ENST00000378133 SCXQ7RTU7 201 aa11.15□□□□□ -0.62
PCDHA1-201ENST00000378133 F8P00451 2351 aa11.15□□□□□ -0.62
PCDHA1-201ENST00000378133 LELP1Q5T871 98 aa11.15□□□□□ -0.62
PCDHA1-201ENST00000378133 H3BQ85 93 aa11.15□□□□□ -0.63
PCDHA1-201ENST00000378133 SPART-AS1P0CW21 52 aa11.15□□□□□ -0.63
PCDHA1-201ENST00000378133 MIFP14174 115 aa11.15□□□□□ -0.63
PCDHA1-201ENST00000378133 TM2D3Q9BRN9 247 aa11.15□□□□□ -0.63
PCDHA1-201ENST00000378133 TRBV7-6A0A0J9YX20 115 aa11.13□□□□□ -0.63
PCDHA1-201ENST00000378133 A0A0J9YWU9 116 aa11.11□□□□□ -0.63
PCDHA1-201ENST00000378133 IGHV4-30-4P0DP06 118 aa11.11□□□□□ -0.63
PCDHA1-201ENST00000378133 PRR34Q9NV39 138 aa11.11□□□□□ -0.63
PCDHA1-201ENST00000378133 NDUFC1O43677 76 aa11.11□□□□□ -0.63
PCDHA1-201ENST00000378133 DIRC1Q969H9 104 aa11.11□□□□□ -0.63
PCDHA1-201ENST00000378133 TRBV7-4A0A0J9YYF1 115 aa11.1□□□□□ -0.63
PCDHA1-201ENST00000378133 TEP1Q99973 2627 aaKnown RBP11.09□□□□□ -0.63
PCDHA1-201ENST00000378133 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.08□□□□□ -0.64
PCDHA1-201ENST00000378133 MPLKIPQ8TAP9 179 aa11.08□□□□□ -0.64
PCDHA1-201ENST00000378133 XAGE1AQ9HD64 81 aa11.08□□□□□ -0.64
PCDHA1-201ENST00000378133 NREPQ16612 68 aa11.08□□□□□ -0.64
PCDHA1-201ENST00000378133 C6orf48Q9UBA6 75 aa11.07□□□□□ -0.64
PCDHA1-201ENST00000378133 ZNF73O43830 326 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms