RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 CCKP06307 115 aa8.54□□□□□ -1.04
SF1-204ENST00000377390 IBA57-AS1B1ANH7 110 aa8.53□□□□□ -1.04
SF1-204ENST00000377390 TRRAPQ9Y4A5 3859 aa8.53□□□□□ -1.04
SF1-204ENST00000377390 JMJD7-PLA2G4BH0Y9G9 81 aa8.53□□□□□ -1.04
SF1-204ENST00000377390 ODF3L2Q3SX64 289 aa8.53□□□□□ -1.04
SF1-204ENST00000377390 SERP1Q9Y6X1 66 aa8.53□□□□□ -1.04
SF1-204ENST00000377390 PKD1L1Q8TDX9 2849 aa8.53□□□□□ -1.04
SF1-204ENST00000377390 TMEM256-PLSCR3K7ERE1 68 aa8.52□□□□□ -1.05
SF1-204ENST00000377390 TRAV10A0A0B4J240 114 aa8.52□□□□□ -1.05
SF1-204ENST00000377390 LINC00269Q8N2A0 174 aa8.52□□□□□ -1.05
SF1-204ENST00000377390 TRBV6-4A0A1B0GX49 114 aa8.51□□□□□ -1.05
SF1-204ENST00000377390 SEC61GP60059 68 aa8.5□□□□□ -1.05
SF1-204ENST00000377390 LINC01006Q8NI28 216 aa8.5□□□□□ -1.05
SF1-204ENST00000377390 AKAP9Q99996 3911 aa8.5□□□□□ -1.05
SF1-204ENST00000377390 SMIM26A0A096LP01 95 aa8.5□□□□□ -1.05
SF1-204ENST00000377390 TRBV6-8A0A0A6YYG3 113 aa8.5□□□□□ -1.05
SF1-204ENST00000377390 LY6G6DO95868 133 aa8.5□□□□□ -1.05
SF1-204ENST00000377390 GYPEP15421 78 aa8.5□□□□□ -1.05
SF1-204ENST00000377390 CR1P17927 2039 aa8.5□□□□□ -1.05
SF1-204ENST00000377390 ANGP03950 147 aaKnown RBP8.5□□□□□ -1.05
SF1-204ENST00000377390 TRBV7-6A0A0J9YX20 115 aa8.49□□□□□ -1.05
SF1-204ENST00000377390 Q8N814 137 aa8.49□□□□□ -1.05
SF1-204ENST00000377390 IGHV3OR16-9A0A0B4J2B5 98 aa8.49□□□□□ -1.05
SF1-204ENST00000377390 LINC00959A0A1B0GUT2 108 aa8.48□□□□□ -1.05
SF1-204ENST00000377390 NDUFC2-KCTD14E9PQ53 114 aa8.48□□□□□ -1.05
SF1-204ENST00000377390 H7BZZ5 65 aa8.48□□□□□ -1.05
SF1-204ENST00000377390 DEFB135Q30KP9 77 aa8.48□□□□□ -1.05
SF1-204ENST00000377390 SPATA3Q8NHX4 192 aa8.48□□□□□ -1.05
SF1-204ENST00000377390 Q8N3U1 123 aa8.48□□□□□ -1.05
SF1-204ENST00000377390 Q8N9L7 120 aa8.47□□□□□ -1.05
SF1-204ENST00000377390 A0A087WZ39 114 aa8.46□□□□□ -1.05
SF1-204ENST00000377390 TRAV7A0A075B6U4 112 aa8.46□□□□□ -1.06
SF1-204ENST00000377390 Q6ZQY7 126 aa8.46□□□□□ -1.06
SF1-204ENST00000377390 TM2D3Q9BRN9 247 aa8.46□□□□□ -1.06
SF1-204ENST00000377390 M0R2N4 97 aa8.44□□□□□ -1.06
SF1-204ENST00000377390 PRR4Q16378 134 aa8.44□□□□□ -1.06
SF1-204ENST00000377390 XAGE1AQ9HD64 81 aa8.44□□□□□ -1.06
SF1-204ENST00000377390 LINC01547P58512 204 aaPredicted RBP8.44□□□□□ -1.06
SF1-204ENST00000377390 FP248Q71RG6 208 aaPredicted RBP8.43□□□□□ -1.06
SF1-204ENST00000377390 C16orf74Q96GX8 76 aa8.43□□□□□ -1.06
SF1-204ENST00000377390 MIFP14174 115 aa8.43□□□□□ -1.06
SF1-204ENST00000377390 OXLD1Q5BKU9 147 aa8.43□□□□□ -1.06
SF1-204ENST00000377390 LYPD5Q6UWN5 251 aa8.43□□□□□ -1.06
SF1-204ENST00000377390 ATP5EP2Q5VTU8 51 aa8.42□□□□□ -1.06
SF1-204ENST00000377390 C4orf3Q8WVX3 66 aa8.42□□□□□ -1.06
SF1-204ENST00000377390 IGHV4-28A0A0C4DH34 117 aa8.42□□□□□ -1.06
SF1-204ENST00000377390 IL17DQ8TAD2 202 aa8.41□□□□□ -1.06
SF1-204ENST00000377390 Q6ZVQ6 151 aa8.41□□□□□ -1.06
SF1-204ENST00000377390 C6orf223Q8N319 242 aa8.4□□□□□ -1.06
SF1-204ENST00000377390 CHCHD10Q8WYQ3 142 aaPredicted RBP8.4□□□□□ -1.06
SF1-204ENST00000377390 A0A096LNT2 108 aa8.39□□□□□ -1.07
SF1-204ENST00000377390 UNQ6190/PRO20217Q6UXQ8 127 aa8.39□□□□□ -1.07
SF1-204ENST00000377390 DEFB105AQ8NG35 78 aa8.39□□□□□ -1.07
SF1-204ENST00000377390 NANOS2P60321 138 aaKnown RBP8.38□□□□□ -1.07
SF1-204ENST00000377390 TENM2Q9NT68 2774 aa8.38□□□□□ -1.07
SF1-204ENST00000377390 PSPHP1O15172 72 aa8.38□□□□□ -1.07
SF1-204ENST00000377390 CELA1Q9UNI1 258 aa8.38□□□□□ -1.07
SF1-204ENST00000377390 NREPQ16612 68 aa8.38□□□□□ -1.07
SF1-204ENST00000377390 TENM3Q9P273 2699 aa8.38□□□□□ -1.07
SF1-204ENST00000377390 SPAG11BQ08648 103 aa8.37□□□□□ -1.07
SF1-204ENST00000377390 KRTAP1-3Q8IUG1 177 aa8.37□□□□□ -1.07
SF1-204ENST00000377390 FUSP35637 526 aaKnown RBP eCLIP8.37□□□□□ -1.075e-13■□□□□ 10.2
SF1-204ENST00000377390 TMEM254Q8TBM7 123 aa8.37□□□□□ -1.07
SF1-204ENST00000377390 RETNQ9HD89 108 aa8.37□□□□□ -1.07
SF1-204ENST00000377390 FAM229BQ4G0N7 80 aa8.36□□□□□ -1.07
SF1-204ENST00000377390 Q8IZM0 81 aa8.36□□□□□ -1.07
SF1-204ENST00000377390 BPY2O14599 106 aa8.36□□□□□ -1.07
SF1-204ENST00000377390 REG3AQ06141 175 aa8.36□□□□□ -1.07
SF1-204ENST00000377390 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.36□□□□□ -1.07
SF1-204ENST00000377390 OBSCN-AS1Q96MR7 158 aa8.36□□□□□ -1.07
SF1-204ENST00000377390 C3orf84H3BNL1 204 aa8.35□□□□□ -1.07
SF1-204ENST00000377390 KLK12Q9UKR0 248 aa8.35□□□□□ -1.07
SF1-204ENST00000377390 STAB2Q8WWQ8 2551 aa8.35□□□□□ -1.07
SF1-204ENST00000377390 F8WDY8 70 aa8.35□□□□□ -1.07
SF1-204ENST00000377390 ZNF561-AS1K7EIQ3 104 aa8.35□□□□□ -1.07
SF1-204ENST00000377390 FAM19A3Q7Z5A8 133 aa8.35□□□□□ -1.07
SF1-204ENST00000377390 LINC00575Q6W349 94 aa8.35□□□□□ -1.07
SF1-204ENST00000377390 C10orf25Q5T742 122 aa8.34□□□□□ -1.07
SF1-204ENST00000377390 Q6ZQT0 140 aa8.33□□□□□ -1.08
SF1-204ENST00000377390 KLKP1Q107X0 134 aa8.33□□□□□ -1.08
SF1-204ENST00000377390 HIGD2AQ9BW72 106 aa8.33□□□□□ -1.08
SF1-204ENST00000377390 TRBV10-3A0A0K0K1G6 114 aa8.32□□□□□ -1.08
SF1-204ENST00000377390 DIRC1Q969H9 104 aa8.32□□□□□ -1.08
SF1-204ENST00000377390 PRO0255Q9UI72 69 aa8.32□□□□□ -1.08
SF1-204ENST00000377390 HIGD2BQ4VC39 106 aa8.32□□□□□ -1.08
SF1-204ENST00000377390 CYSRT1A8MQ03 144 aa8.31□□□□□ -1.08
SF1-204ENST00000377390 CD164L2Q6UWJ8 174 aa8.31□□□□□ -1.08
SF1-204ENST00000377390 FAM30AQ9NZY2 134 aa8.31□□□□□ -1.08
SF1-204ENST00000377390 GIG44P09565 113 aaPredicted RBP8.3□□□□□ -1.08
SF1-204ENST00000377390 MUC7Q8TAX7 377 aa8.3□□□□□ -1.08
SF1-204ENST00000377390 C16orf95Q9H693 158 aa8.3□□□□□ -1.08
SF1-204ENST00000377390 ESRGQ1W209 222 aa8.29□□□□□ -1.08
SF1-204ENST00000377390 PLAC8L1A1L4L8 177 aa8.28□□□□□ -1.08
SF1-204ENST00000377390 NDUFC1O43677 76 aa8.28□□□□□ -1.08
SF1-204ENST00000377390 COX7BP24311 80 aa8.28□□□□□ -1.08
SF1-204ENST00000377390 KRTAP10-3P60369 221 aa8.28□□□□□ -1.08
SF1-204ENST00000377390 Q8NDZ9 215 aa8.28□□□□□ -1.08
SF1-204ENST00000377390 CMC4P56277 68 aaPredicted RBP8.28□□□□□ -1.08
SF1-204ENST00000377390 SPTSSBQ8NFR3 76 aa8.28□□□□□ -1.08
SF1-204ENST00000377390 PRYO14603 147 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms