RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 PLEKHB2Q96CS7 222 aa13.42□□□□□ -0.26
SRM-201ENST00000376957 NDUFA12Q9UI09 145 aa13.41□□□□□ -0.26
SRM-201ENST00000376957 IGKCP01834 107 aa13.4□□□□□ -0.26
SRM-201ENST00000376957 HIST1H2BKO60814 126 aa13.39□□□□□ -0.27
SRM-201ENST00000376957 HIST1H2BJP06899 126 aa13.39□□□□□ -0.27
SRM-201ENST00000376957 HIST1H2BOP23527 126 aa13.39□□□□□ -0.27
SRM-201ENST00000376957 HIST1H2BBP33778 126 aa13.39□□□□□ -0.27
SRM-201ENST00000376957 HIST1H2BDP58876 126 aa13.39□□□□□ -0.27
SRM-201ENST00000376957 HIST1H2BCP62807 126 aa13.39□□□□□ -0.27
SRM-201ENST00000376957 HIST2H2BEQ16778 126 aa13.39□□□□□ -0.27
SRM-201ENST00000376957 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.39□□□□□ -0.27
SRM-201ENST00000376957 HIST1H2BHQ93079 126 aa13.39□□□□□ -0.27
SRM-201ENST00000376957 HIST1H2BNQ99877 126 aa13.39□□□□□ -0.27
SRM-201ENST00000376957 HIST1H2BMQ99879 126 aa13.39□□□□□ -0.27
SRM-201ENST00000376957 IGLV1-50A0A075B6I6 118 aa13.38□□□□□ -0.27
SRM-201ENST00000376957 A0A0U1RRA0 63 aa13.38□□□□□ -0.27
SRM-201ENST00000376957 LEPROTO15243 131 aa13.38□□□□□ -0.27
SRM-201ENST00000376957 VPREB1P12018 145 aa13.38□□□□□ -0.27
SRM-201ENST00000376957 UBE2AP49459 152 aa13.37□□□□□ -0.27
SRM-201ENST00000376957 IGKV2-28A0A075B6P5 120 aa13.36□□□□□ -0.27
SRM-201ENST00000376957 IGKV2D-28P01615 120 aa13.36□□□□□ -0.27
SRM-201ENST00000376957 SMIM13P0DJ93 91 aa13.36□□□□□ -0.27
SRM-201ENST00000376957 RPL13AP40429 203 aaKnown RBP13.36□□□□□ -0.27
SRM-201ENST00000376957 NMUP48645 174 aa13.36□□□□□ -0.27
SRM-201ENST00000376957 LGALS3P17931 250 aaKnown RBP13.35□□□□□ -0.27
SRM-201ENST00000376957 J3QQQ9 107 aa13.34□□□□□ -0.27
SRM-201ENST00000376957 PMCHL2Q9BQD1 86 aa13.33□□□□□ -0.28
SRM-201ENST00000376957 MIR7-3HGQ8N6C7 128 aa13.32□□□□□ -0.28
SRM-201ENST00000376957 PRR26Q8N8Z3 221 aa13.32□□□□□ -0.28
SRM-201ENST00000376957 M0R378 163 aa13.31□□□□□ -0.28
SRM-201ENST00000376957 S100A12P80511 92 aa13.31□□□□□ -0.28
SRM-201ENST00000376957 BOD1L2Q8IYS8 172 aa13.31□□□□□ -0.28
SRM-201ENST00000376957 SYS1-DBNDD2H3BUS1 97 aa13.3□□□□□ -0.28
SRM-201ENST00000376957 FAM19A1Q7Z5A9 133 aa13.29□□□□□ -0.28
SRM-201ENST00000376957 MIEN1Q9BRT3 115 aa13.29□□□□□ -0.28
SRM-201ENST00000376957 IGKV2D-26A0A0A0MRZ7 120 aa13.28□□□□□ -0.28
SRM-201ENST00000376957 PET117Q6UWS5 81 aa13.28□□□□□ -0.28
SRM-201ENST00000376957 TMEM126AQ9H061 195 aa13.28□□□□□ -0.28
SRM-201ENST00000376957 KRTAP1-4P0C5Y4 121 aa13.27□□□□□ -0.29
SRM-201ENST00000376957 TSPEAR-AS2P59090 65 aa13.25□□□□□ -0.29
SRM-201ENST00000376957 E9PLD3 99 aa13.24□□□□□ -0.29
SRM-201ENST00000376957 S100A1P23297 94 aa13.24□□□□□ -0.29
SRM-201ENST00000376957 TMEM238C9JI98 176 aa13.23□□□□□ -0.29
SRM-201ENST00000376957 CRYGAP11844 174 aa13.23□□□□□ -0.29
SRM-201ENST00000376957 COA6Q5JTJ3 125 aaKnown RBP13.23□□□□□ -0.29
SRM-201ENST00000376957 LINC01545Q5VT33 79 aa13.23□□□□□ -0.29
SRM-201ENST00000376957 Q8NDZ9 215 aa13.22□□□□□ -0.29
SRM-201ENST00000376957 C20orf202A1L168 122 aa13.21□□□□□ -0.29
SRM-201ENST00000376957 NCR3O14931 201 aa13.21□□□□□ -0.29
SRM-201ENST00000376957 PRLHP81277 87 aa13.21□□□□□ -0.29
SRM-201ENST00000376957 KRTAP13-1Q8IUC0 172 aa13.21□□□□□ -0.29
SRM-201ENST00000376957 PRYO14603 147 aa13.2□□□□□ -0.3
SRM-201ENST00000376957 AKR1D1P51857 326 aa13.2□□□□□ -0.3
SRM-201ENST00000376957 LOC107984156A0A0G2JMH3 177 aa13.19□□□□□ -0.3
SRM-201ENST00000376957 KRTDAPP60985 99 aa13.19□□□□□ -0.3
SRM-201ENST00000376957 ARL17AQ8IVW1 177 aa13.19□□□□□ -0.3
SRM-201ENST00000376957 DAND5Q8N907 189 aa13.18□□□□□ -0.3
SRM-201ENST00000376957 TRBV10-2A0A0K0K1G8 114 aa13.17□□□□□ -0.3
SRM-201ENST00000376957 C3orf79P0CE67 100 aa13.17□□□□□ -0.3
SRM-201ENST00000376957 A0A0J9YXY3 114 aa13.16□□□□□ -0.3
SRM-201ENST00000376957 FAM229BQ4G0N7 80 aa13.16□□□□□ -0.3
SRM-201ENST00000376957 TYMSOSQ8TAI1 123 aa13.16□□□□□ -0.3
SRM-201ENST00000376957 KCNQ1DNQ9H478 68 aa13.16□□□□□ -0.3
SRM-201ENST00000376957 NDUFC2O95298 119 aa13.15□□□□□ -0.3
SRM-201ENST00000376957 SPANXB1Q9NS25 103 aaPredicted RBP13.15□□□□□ -0.3
SRM-201ENST00000376957 TNXBP22105 4242 aa13.15□□□□□ -0.31
SRM-201ENST00000376957 ETDCA0A1B0GVM5 59 aa13.14□□□□□ -0.31
SRM-201ENST00000376957 S100A7L2Q5SY68 101 aa13.14□□□□□ -0.31
SRM-201ENST00000376957 HIGD2AQ9BW72 106 aa13.14□□□□□ -0.31
SRM-201ENST00000376957 LINC00337Q8N6G1 96 aa13.13□□□□□ -0.31
SRM-201ENST00000376957 CBY1Q9Y3M2 126 aa13.13□□□□□ -0.31
SRM-201ENST00000376957 ZNF706Q9Y5V0 76 aaPredicted RBP13.13□□□□□ -0.31
SRM-201ENST00000376957 HMCN2Q8NDA2 5059 aa13.13□□□□□ -0.31
SRM-201ENST00000376957 TRBV10-3A0A0K0K1G6 114 aa13.12□□□□□ -0.31
SRM-201ENST00000376957 DDTP30046 118 aa13.12□□□□□ -0.31
SRM-201ENST00000376957 ZNF815PA8K554 130 aa13.11□□□□□ -0.31
SRM-201ENST00000376957 TIMM17BO60830 172 aa13.1□□□□□ -0.31
SRM-201ENST00000376957 A0A087X002 238 aa13.09□□□□□ -0.31
SRM-201ENST00000376957 S100A2P29034 98 aa13.09□□□□□ -0.31
SRM-201ENST00000376957 SPRR1AP35321 89 aa13.08□□□□□ -0.32
SRM-201ENST00000376957 NPC2P61916 151 aa13.07□□□□□ -0.32
SRM-201ENST00000376957 ANAPC11Q9NYG5 84 aa13.07□□□□□ -0.32
SRM-201ENST00000376957 S100A6P06703 90 aa13.06□□□□□ -0.32
SRM-201ENST00000376957 ADAMTSL4-AS1Q5T5F5 129 aa13.06□□□□□ -0.32
SRM-201ENST00000376957 SCGB1D4Q6XE38 83 aa13.05□□□□□ -0.32
SRM-201ENST00000376957 COPS9Q8WXC6 57 aa13.05□□□□□ -0.32
SRM-201ENST00000376957 HINT1P49773 126 aaPredicted RBP13.04□□□□□ -0.32
SRM-201ENST00000376957 SPANXCQ9NY87 97 aa13.04□□□□□ -0.32
SRM-201ENST00000376957 SNRPEP62304 92 aaKnown RBP13.03□□□□□ -0.32
SRM-201ENST00000376957 JOSD1Q15040 202 aaPredicted RBP13.03□□□□□ -0.32
SRM-201ENST00000376957 LINC00308Q8TCZ7 52 aa13.03□□□□□ -0.32
SRM-201ENST00000376957 IGLV6-57P01721 117 aa13.02□□□□□ -0.33
SRM-201ENST00000376957 TRAV23DV6A0A075B6W5 121 aa13.01□□□□□ -0.33
SRM-201ENST00000376957 KRTAP4-16G5E9R7 235 aaPredicted RBP13.01□□□□□ -0.33
SRM-201ENST00000376957 SMCR5Q8TEV8 140 aa13.01□□□□□ -0.33
SRM-201ENST00000376957 SPRR4Q96PI1 79 aa13.01□□□□□ -0.33
SRM-201ENST00000376957 TSPAN13O95857 204 aa13□□□□□ -0.33
SRM-201ENST00000376957 SOSTDC1Q6X4U4 206 aa13□□□□□ -0.33
SRM-201ENST00000376957 LINC00518Q8N0U6 118 aa13□□□□□ -0.33
SRM-201ENST00000376957 B5MCH6 92 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms